Equa007938.2
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- -
- Assembly
- GCA_963859945.1
- Location
- OY982564.1:18834669-18843572[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0063 0.63 11.6 1.1 3 23 709 730 708 730 0.96 2 23 0.24 24 6.6 0.3 1 22 1116 1137 1116 1137 0.95 3 23 7.4 7.5e+02 1.9 0.2 1 22 1179 1200 1179 1202 0.82 4 23 0.0024 0.24 12.9 2.1 3 22 1213 1232 1213 1232 0.96 5 23 0.68 68 5.2 0.0 3 23 1241 1262 1239 1262 0.89 6 23 0.02 2 10.0 0.2 3 23 1282 1303 1280 1303 0.96 7 23 0.0021 0.21 13.0 2.5 1 23 1309 1332 1309 1332 0.95 8 23 0.14 14 7.3 0.0 1 23 1359 1382 1359 1382 0.90 9 23 0.0062 0.62 11.6 3.5 1 23 1387 1409 1387 1409 0.97 10 23 0.088 8.8 8.0 0.1 1 23 1415 1438 1415 1438 0.95 11 23 0.0026 0.26 12.8 1.3 1 23 1451 1473 1451 1473 0.97 12 23 0.0002 0.02 16.3 1.8 1 23 1528 1551 1528 1551 0.97 13 23 0.0095 0.95 11.0 1.1 1 23 1611 1634 1611 1634 0.96 14 23 0.0027 0.27 12.7 2.1 2 23 1661 1683 1660 1683 0.95 15 23 0.098 9.9 7.8 0.1 2 23 1689 1711 1688 1711 0.93 16 23 0.011 1.1 10.8 0.2 1 21 1755 1775 1755 1776 0.95 17 23 0.00047 0.048 15.1 1.0 1 23 1786 1808 1786 1808 0.93 18 23 0.0001 0.01 17.2 0.3 2 23 1898 1920 1898 1920 0.93 19 23 4.5e-07 4.5e-05 24.6 1.4 3 23 1927 1947 1926 1947 0.98 20 23 0.028 2.8 9.5 1.4 1 23 1966 1988 1966 1989 0.94 21 23 0.14 14 7.4 0.0 1 23 2014 2036 2014 2036 0.97 22 23 0.031 3.1 9.4 0.6 1 23 2042 2065 2042 2065 0.95 23 23 0.00029 0.029 15.8 0.4 1 23 2073 2096 2073 2096 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCTTCAAAAATCAAGGATTGCGTGTCTGTAGAGATAAATGAAAATGATGAGCTGCCCACGAATGTCTGTAGGAAATGCTTGGACAATGTCAATAATTGgcataagtttaaaaatgtttgtgaaaGGACACAAAACAAACTACAGTCTCTGATTAGTAAAGATGGCAGCCAACTAGAAGAGGTTCAAATTAAGAGTGAACCTTTGTCTGATGAAGCTTATGATGATGGAGTTGTTATTGAGGGCTCATATCCTGATAGTGAGAATGCCAGTGTGGCAAATAAAGTTCAACCTGAAGGTCCCCCAATCTTGGCATCATTGGGGCTCACGCCTAGGAGTGATAAGAAGTGTGTGGATCCTCGAATGGATTGGCACCGGGTCTATGCCATCTTGGACATGGTTCAAGACAATGAGGTGATTGACTCTCTACAATCAAAGGAAGAGTGTGATGTTTTGCAACACTCTGATCATGACTCTGACACTGAGGCTGAACTTCAACCAGATATTGAAGATAACTATGTAGATTGCAAAAATGGCTAtgtctgtaaaaataataaggtcATATCAAAGAATCCTAAACTATCACCCTCtatgaacaatattaaaatcagAGAAACTCAGCAACTCAGGAAACGAAAATTAGACTTTCCCAAACAGCACTGCTCGCGTcctaaaaatgcttggcaattGTTATTCACTGATGACCTACTTGAATTGATAGTCAACTCCACTAATGAAAATATCGTCAGGAATGGAAAAAATGACTCCATTGCAACTAATGTCAGCGAAATAAAAACACTTATCGGCATTTTGTATTTGCATGGAATAATGCGGCCGACGCATGAAAATTGTACTGACCTTTGGCGCTGTGAATTTGGTGTACCTTGCGTTAGAAGTTCCATGAAATATGAGcgatttaaatttcttttacaaaacataagtTTTGACAAAGAGGATGATGACAGCATTATACAGTTTGATATAATGAAACGTATGCGTAAGGTATTTGAAATCTTTGCCATGAATTGCAGAACAGCTCACGAGATCGGGAATATTGTAGTTATTGATGAGATCATCGTTCCAGTTTACGGACCTTGTCCATTTCGATATGATATTGATAAGAAACCACTGAAGCGCGGAATAAAGATGATATTGCTTGTAGACTCATCAACATTCTATATGAGTAATTTAGATGTAATTACTGACCCATACTTTGGCGCCGACGAAATTACTAAAAAGTTAGTTCAGCATTTAGCTGGTACTGGTAGAACTATTGTTATGGATAGCTGGTATACTTCTTCATCATTGATGGAAACCCTTAGGAATGAGTACCAATTATTTACTATAGCAGCATTAAATCCAGCCAATGAGTGGATTCCACCCTTGTTCCTTTCTCAGTATAGAAAGTGTAGAACATTCATGTCTGGATTTATTGATCATGATGTTTCACTTACATCTTACGTGAATTCTGatttaaaagcaataaatataatcactAATGAGCCTAGATTTTACAGAAAAGGTCATGTCAACCAAACTACAGTTGTGtctgtgtataaaaaaaatcaatcagcTGTAGAAGTGGTTGATGTTGTCATGAATTACTATACAACTATGCAACATACTAATGATTGGACTCTATCTTTATTCTTTACATTATTGAATATTGCTTCTGTCAATGCTCAGGTGTTATGGAGCTCTCAAAATACAAATGTTGCACAACGTCGCACTTTCATAAAAGATTTGGCTTTAAGCTTAATGGTGCCCGAAGAGAGAATATCTATATCAACAACCAAATTAAGCGACATATGCGAAAGGAGACAGAATTTATCTTTATTGCAAGAAATTGGAGTGGAGAgtgaaaaagaagaagaagaggagGAGGATGAAGAATCAAATGAACCTACTCAACCATTCCCCAAAATGCCCCACATGCCGGAAGTGTCCATAACAGTGATGCGACCTACTGGCGAGACCTTGCATGCACGCCAAGGTATACATCAACTCGCGTCTAAAGACTGCCTTGTCTGCGGCCGCACTTACAGATATTCCCACAATGCTCGTCGACATGAGCTTACCGCTCACAGCTTTGACAGGTACACTAACAAAATAACTCCAAAAAAAACACTTAGTCATATGCAACCCAAACTAAGACCTAACCCATTCAACCCTAAGGCGCGTTTGATGCCGAATCCTATTAGTCATAAAATGCAATTTATGTCCAAAAACATCCCAACAAAAGTAGTACCTGTAAATAAAGTTATCACACCTCAGAAGCCCATACCAATTAAATCGGCTAAAACGCCGCAAAACAATTTACCTTATCCTCTTCGTATTAAAGCACTCAAAGATTTACAAATTAAGAAAAAGGAACCTCAAATTTTAAAGACTTTATTAACCTCTAAACCTGAAGTTCTCGTTTCTGAACCCGAAATAATAAATTCTGGACCCGAAAGTCCAGAGACACTGATATCTGAACCTGAAATTGCTTCTTTCCAAGTAGAAGCAATACTTTCGGAACCTGACGCTGACGTCTACGATCACCAGCAGGGTGACGAGGAAGCTGATGGCGATATGCACAATAACCAAGGTCAGAATTATGATACGGTTGATATGAATTCTGAAAATGAAATTGAGATCGCACGGCAACAAGGTGACGATATAGAAGGCGAAGAACAGGCTGATGGTGATGAAAATATAGACCAGGATGATAATATGGATGGTGGTCAGAGTGAGAATGATCAAGACGTCGTTGATGAAATGGTAGAAAGTCAAGAAAATGTAGAGATGGAAGATGGTTTAGAAATTAAAGCTGAACATGAAATCAAGGAAGGTGAGCAATTGCCGGAAGAGAGGGAACATGAAGAAATAGAAATTAATCACGATGGGAACGAAGAAGAAGACGACGATTTGCCAATGACGATACAGCCAGTAGTCGAAATTAATGAAGACTTGCAGGTCAACTCGTTTAATACCGATGTAGCCGATGGTGATGAACTTGACGAGACTGTTGATCCAAACGAGATTGTCGATCCTAACGAGACTGTCGACGAGGAAGAGGTCAAAGAACTCGATCCTGATAAAACATATGTGACAAAAACGCAACGAGACTTCATTTTGAAGTATCGTGACGTTATTGAACAAATCAATACGAAACGTTGTTTGTGTTGTGACAGAGAACATCCGCGCAGAAAAGCTGTTATTCAACATTTGCAgaaaaacggacacaaagtaccCAAACACACATGCTATAATTGCGTAATTACATTCGGGCATATTGGTGCTCTGCTCAGTCACATGAGGTCAAATTCTTGCACTGATCTGTGGAAGATAATATATAACGAAAATGGTATTACTGATGACTTGGTTCTGGAGGATGAACCTAAGGAGGTTAAAGTTCagtataaagatatttttaacgCTAGATCCTACGCTTGCAAACTCTGTCCAGCAAAATTTCAGTTGAAACAATTCATAATGAAACATGTTTTGGATGCTCATGAAGATGGACAATCTAGGGTGCCGCTCGGATGTGTGCATTGTAGAGCACGGTTTAAGGATAAGAGTTTGCTTAAAAAACACATTCGTAAAGGTGATTGCACAGTTTATGTAGCTTGTGACTTGTGCCCAGAAACGTTCGGGAATATGCAGAGTTTCAATGATCACGCATTAGCCATCCATGCTGGTAATTTCGAGTCAGATAGCCAGAGCAAATGTGTCGACGGTCGCCCTACTGACTGTCCATTGTGTGGGAAGAAAAATAGCAGCTATCCGAATTtagtaaaacatttgaaaattattCACAATGAAGAAACACCTCACTACTGTCAGCATTGCGACTCTAAATTTGAACAAGCTGCTGATCTCAACAAACACATTTACATGGAACATTCTGACAGAACTTTAGGTATGCAACAAAACAATGAGCCGGATATGTCCATTGTGAAGGAAGAGGCGGAAGAGTATCATTATTCCTGTACTGAATGTAACGCCATATTTGAAACTGTCGATGCCTGGACAGACCATCAGGTGGCCGAACACAACCAAGTGGCGCATCACTGCGACCAATGCGATAAGAAATTCTTGCGTCCCTCTGAGCTTGCAGAACACAAGAACACACATTTGAGGGTTAAATTTTATCCTTGCAGCGTTTGCGCCAACTCTTATAGTACCCCTCAAAAATTATCAGAACATGTACAACAAGCCCATCCAGGAATCGGTGCAATAGCTGCAGCAGATTCAGAGTTCTTCTGTGACATCTGTATCAGATCATTCAAAAGTCGTCAAGCATATTCAAACCATATGCGTATACATGCTAAAGTGCCTACGACTAATAGAAAACCAGGAGATACACCTTCTTCTTCTAACAAAGGATTTTCACCCTCAATTATAGGCAAACCTATTAAACAAGTTTATCCCATGGTCCAACCTGGTTTTGTCTCATTTAAGCCTCATTACAATATCCCTAATGCTCCCTATTCATGTGACATTTGTGGGAAGGGATTCATGCATAAAAAGAACATATGGAAACACAAGAAAGTTTTACATGCGGATATATTAAACGAAAGAAATGACAGTGAGGAGAATACTATGCAAGCTTCCACTGAAGAAGACGAGTTCAATCCAGATGAAAACGGCGCTACTCTATCTACGCCGCAGTTCAATAGTTTCAACTTTGGTAACTTAGCAAATAATATCCAACAAACGCAACAAGATACAATGCCTTATTCGTGTGAATTATGTCTTAAACGATTTCCGCTTAGAACCAGTTTGTGGAAGCATAAACGCGCTAAACATGGAATCATTAATCCTAATTCAAGTGGCGGCAACGATTCACAAACACCGTTGGCAAGTGGTGAAGGAAGTAGTAGATCGAGTTGCACAATATGTAGAATTACATTTTCAGATAAGAAATCTTATTACCGCCATCGAAAAAACGTGCACAAGTCCACTGTACAAATGTGCAAAATATGTGGTAAACCTCTTAACTCGACTTTAGAGCTCTATGAGCATTTGAAGGCTGCCCACGCTAGAGAACTTTTAGGTTACAACGCTAATCAAGGTTCCAGTAAATCTCACGAAGTAGCACAAGAAATTGAACCTGATTATGAGAACGACCAGGAATCAGTGGATCCTAGCGTTGATTATCAAGCTCGCTACCCTTGTGACACTTGTGGCAAACAATTCGTTGGTTTGTTAGCTTTACAGAACCATCAGTGCATTAATCAGGCTCCACCTCAACCACAAACATTCGACTGTGAGATTTGTCACAAGAGCTATACATCAATATCGGCTCTAAAGAGCCACCGTGGATGGCACTTACGATCACCGGATGGAAAAGCAGCTGCTAATAATAGCGGACTTTGGATGCCTCAGCACAAAGTCACAAGCAAAATAAGTAAACATGAAGTTATTGATCCAGTACAGCTTGCTAAAGTCACGCATTCGAGCCCAGCAGCTGCAGTTGCTGCTAAAAGAAGACTCCCGCCTGAGGTCGAAGTCACCGTTGttaatccaaataaaaaaatgcgctcTGATGATTCTGTTGAATTAGAACAACAAAATTCTAGTTCTGCTGAAGACAGATATTGCAACATTTGTGACAAAGAGTTTACTAAACGAGCAGCTTATCAGCGCCATATGGATGAGGTCCATCAACCGAATTCGGTTTTTTGTCCGGTGTGTGATAAGAGTTTCACAAGAAAATCGACGCTACTCATTCATATGAAGAAACACTATGAGAGTGGTGAAGGCAGTTCAAGTATGGTGGGACAAGTTGAGGAGGAGTTGCATACTTGTGACTTATGCGGAGCCCAATACGATGATGAACAATCGCTGAGAGCGCATCGTGTGAGGCATCACGGTGAAGAGTCTGAAGAAGAAGATGACGATGACGGTGACGATGGAAACGTACCCATTCCTCCTCCGGGTGAGTTCACTTGCGGGCAATGTGGAGATGGTGTAGCTACACCTCGAGATTTAATCGCTCATCGCACAATGCACTCTACTCCCACTAAATTCTTCTGTAACATATGCAAAGTATACTTCGCGAGGGCATTAGACCTCTCCTCCCACACAAGGGCTAGACACGCGGACAACGACAAGGTATTCTTTCCCTGTGCCATGTGTGACAGGTTCTACATGAACAAAAAGAGTTTGCAACGGCACATTGAGATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKIKDCVSVEINENDELPTNVCRKCLDNVNNWHKFKNVCERTQNKLQSLISKDGSQLEEVQIKSEPLSDEAYDDGVVIEGSYPDSENASVANKVQPEGPPILASLGLTPRSDKKCVDPRMDWHRVYAILDMVQDNEVIDSLQSKEECDVLQHSDHDSDTEAELQPDIEDNYVDCKNGYVCKNNKVISKNPKLSPSMNNIKIRETQQLRKRKLDFPKQHCSRPKNAWQLLFTDDLLELIVNSTNENIVRNGKNDSIATNVSEIKTLIGILYLHGIMRPTHENCTDLWRCEFGVPCVRSSMKYERFKFLLQNISFDKEDDDSIIQFDIMKRMRKVFEIFAMNCRTAHEIGNIVVIDEIIVPVYGPCPFRYDIDKKPLKRGIKMILLVDSSTFYMSNLDVITDPYFGADEITKKLVQHLAGTGRTIVMDSWYTSSSLMETLRNEYQLFTIAALNPANEWIPPLFLSQYRKCRTFMSGFIDHDVSLTSYVNSDLKAINIITNEPRFYRKGHVNQTTVVSVYKKNQSAVEVVDVVMNYYTTMQHTNDWTLSLFFTLLNIASVNAQVLWSSQNTNVAQRRTFIKDLALSLMVPEERISISTTKLSDICERRQNLSLLQEIGVESEKEEEEEEDEESNEPTQPFPKMPHMPEVSITVMRPTGETLHARQGIHQLASKDCLVCGRTYRYSHNARRHELTAHSFDRYTNKITPKKTLSHMQPKLRPNPFNPKARLMPNPISHKMQFMSKNIPTKVVPVNKVITPQKPIPIKSAKTPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPEVLVSEPEIINSGPESPETLISEPEIASFQVEAILSEPDADVYDHQQGDEEADGDMHNNQGQNYDTVDMNSENEIEIARQQGDDIEGEEQADGDENIDQDDNMDGGQSENDQDVVDEMVESQENVEMEDGLEIKAEHEIKEGEQLPEEREHEEIEINHDGNEEEDDDLPMTIQPVVEINEDLQVNSFNTDVADGDELDETVDPNEIVDPNETVDEEEVKELDPDKTYVTKTQRDFILKYRDVIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRSNSCTDLWKIIYNENGITDDLVLEDEPKEVKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDAHEDGQSRVPLGCVHCRARFKDKSLLKKHIRKGDCTVYVACDLCPETFGNMQSFNDHALAIHAGNFESDSQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEETPHYCQHCDSKFEQAADLNKHIYMEHSDRTLGMQQNNEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCANSYSTPQKLSEHVQQAHPGIGAIAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDTPSSSNKGFSPSIIGKPIKQVYPMVQPGFVSFKPHYNIPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNERNDSEENTMQASTEEDEFNPDENGATLSTPQFNSFNFGNLANNIQQTQQDTMPYSCELCLKRFPLRTSLWKHKRAKHGIINPNSSGGNDSQTPLASGEGSSRSSCTICRITFSDKKSYYRHRKNVHKSTVQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSHEVAQEIEPDYENDQESVDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQAPPQPQTFDCEICHKSYTSISALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKISKHEVIDPVQLAKVTHSSPAAAVAAKRRLPPEVEVTVVNPNKKMRSDDSVELEQQNSSSAEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLIHMKKHYESGEGSSSMVGQVEEELHTCDLCGAQYDDEQSLRAHRVRHHGEESEEEDDDDGDDGNVPIPPPGEFTCGQCGDGVATPRDLIAHRTMHSTPTKFFCNICKVYFARALDLSSHTRARHADNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01075719;
- 90% Identity
- -
- 80% Identity
- -