Equa008131.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- -
- Assembly
- GCA_963859945.1
- Location
- OY982564.1:23882267-23897095[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.16 5.9e+03 -2.8 0.1 253 279 77 104 52 107 0.54 2 3 3.8e-25 1.4e-20 74.8 15.5 1 97 124 216 124 217 0.88 3 3 0.025 8.9e+02 -0.1 0.5 213 236 217 239 207 242 0.55
Sequence Information
- Coding Sequence
- ATGGGACATCAATCTGAACTGGCTACACCTCACAATAGTGACGACGAAAGCGGCGATGCTTTTACAGATGGCGATTTTGGGGATTCAGATGATGAAACTATTACAGAAAGAAATGATAATGTAAAAGGATCCCATATTCCCATTAACGAAGCCAAAAACGAGGATATACACAAAATGAATGGAGCAACCAATGGTTTTTCTAAAAACACAGATTTTGAAGACCAACCTAGACATATAGTTCGTACAATTAGTGAGGCTCACTCCAGTGATGTAGAGAATTCAAACTTAACCCTATCAGACCTTCGCAGAGATTCTCACGGCGACCAAAATCCCTCAATAGTTGGCATTCTTGGAGATCAGCAGAATcatGCTGAGCAGCGGTTGGCGGCGCGTCGTGCTGCTCGAGCGGAGGCGCGAGAAATTCGCATGCGCGAGTTGGAGCGGCAGCAGAGAGAGCAGGAAGACCATGCTGATAAGGCATATGACATGTATGCAGAGACGGTGGGGCGGCGGGACCGCACACGCCTGGCTGCGCTCAGCCCCGCCAGCTCCGTGCACTCGCCACGGAGAAGCTCCGAAGACTCCGTCGATGATGTCTTCAGTATGAAGGATCTTAGGGCCCGCGAAGCTTTGAACCGAGTGGAAGAACTGGAGACTGAGAACAGCCATCTGACGAAACGACTAGACAAACTCAAGAACGCTAAGTCAGCACTCCTCAAGGACCTGTGA
- Protein Sequence
- MGHQSELATPHNSDDESGDAFTDGDFGDSDDETITERNDNVKGSHIPINEAKNEDIHKMNGATNGFSKNTDFEDQPRHIVRTISEAHSSDVENSNLTLSDLRRDSHGDQNPSIVGILGDQQNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRDRTRLAALSPASSVHSPRRSSEDSVDDVFSMKDLRAREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -