Equa006671.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- -
- Assembly
- GCA_963859945.1
- Location
- OY982563.1:16158447-16162055[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 9.4e-06 26.2 0.0 1 37 18 54 18 61 0.92 2 2 5.5 4e+03 -1.4 0.1 13 23 139 150 136 152 0.72
Sequence Information
- Coding Sequence
- ATGCCACGAAAGTATGTGCGCAAAGCGGGTGCGAAACTTCGAGGTGTGTGGACTGAAGATGCTCTTTTAGCCGCCTTTGAAGAACTGAGACAAGGGAAATATTCTATTAATGAAATTTCCCGTCGGTACGGTATTCCATCTAGAACCCTAAGGAGACGATTTGCGAAACAAGATACAAAAAAACTGACACTAGggAAACACCCAGTTTTGGATTTCGAGAATGAGAAACGGGTCGTCGCACATGTTCAGAAATTAGAGGCTGCAGGATTTCCTATAACACGAGATATGATACGAAGACTAGCTTATGAGTTTGCTGAAAAACTTGACATAAAACATAACTTTAACGAAGAAACTCGCAAAGCTGGACCACATTGGCTACAGTCTTTTCTGGAACGGCACTCAGAACTTAGCGTTCGACAAGCAGAAGGTTTATCTGTTGCTCGAGCTCAGGGACTGAACCGTGAAGAAGTTAACAAGATGTTTGAGCTCTTGCTTCAAGTTTTCACAGAGCATGATTTACTGGATAAGCCAGATCGTATATTTAACATTGACGAAACTGGGGTCCAATTAAATAACAAGCCAGGAAAAGTTATTGCCACGAAAGGCGCAAAATTTGTTCATTCTGTAACATCAGCAGAAAAAGGGGAGACAATGTCGATTATAGCCTGCTGCAATGCTGCTGGAAATTTTCTACCTCCAGTTGTTATTATAAAGGGAGTTAACAAAAAGCCAGAATTTCAAGATGGACTTCCACCTGGCTCAGATGTTTACATGAGCAAAAAATCAGCGTATGTGAATGCGCAGTTATTCCACCAGTGGCTAGTACAGCATTTTGTACCCCGGAAGCCTCAAGGTAAAGTTATTTTGCTTCTAGATGGCCATTCTTCCCACACTAATTCTGCTGAAATGTTAGAGACTGCAGAAGAAAAcaacataattcttttttgtttaccaAGCCACAGTACACAAGCTTTACAACCTTTGGATCGCAGCTTTTTTAAgccttttaaaactttttatgccGCTGAGACCAAAAACTGGATGCTtgcaaacaaagaaaaaaaaattaatcgattaGTAGCTGGTAGACTGATTGGTAATGCATGGATCAGAGCGGCTACACCTTCTAATGCTGTTTCAGGGTTTAGAGCTTGCGGTATTCATCCCTATAATCCGGCTGCTATTCCAGAAAGTTTCTTTGCAATTTCCGACTTGTCTAAAGTCTTTAATGAGCAGGAAAACGTTGTAATTAGTGAACCTGGTGGATTACAATTACCTCATCCTTCATGTAGTAATTCGACGTTACCAAATTTAGTTGACGACGAGATTCGTGTTAATTCACCTATACGATGTTCTACGCCACCGAATCTCGATCCAATTCATGAGATCTCTGTAACCCCTGACACAGCGGCACCGGATCTTCCTGATTCTCCATCCTTGCTTGCGCAACAGCCTGGTCCGTCTATGCTTTCTTCACAGCCTGGTCCATCTATGTTTTCTTCGCAGCCTGGTCCATCTATGCTTTCTGCACAGCCGGGTGCAGAAATACAAACAGAAACGCCTAGTAAGCATTTACAAGAATTATCTCCCGTGCCGAAAATTCCGGTGCCGTTATACAAAAGAGGAAAACAGTCAGCTGCTGTATTAACTTCAAAGGAAAACATTACGATTaggaaaaataaaggaaaacgTACTCCTAACATTCCATGCAAAAGCAGTACGCAGTCCAGAAAGATTACTAAGAAGAGGACTAGAGCATCTTCTGAAGAAAAAAGTGGAAGTTCAACTTGTGCTTCTGATGACTCTTTCATTGAAAACCAACTTAATATTGTGAAAAAGACAAAGAGAGCTAAAAAAATTAGACAGACTAACAATGTGAATACCCAAAACAAAATTCAGCGTCCTGTTCGCAGAGCTCAGGAAAGGAACCAAATCAGTCAAACTTTCAATGAAAGAGACGAAACTCTTTCAAATGAGCCAGACTTATATCAATATGAGACGGATGAATGTGTGGAATGTTTTGAAGAATTCGAAAAGACAAAATCTAAGGTCAACCGTAAATCGGTTAAGAGGCCAACCGTTAAGAGGAAAATACCTGAAGTCATCGACTTCCGCCTTAACAAAGGTATTCCAAAGACTAATACATCATGTCACAGTTCCCTTCACCTTCTTCACACCACTATCTTAGTGGAACTACAAACAGGTGCTAAAGAACGTACTACCAAATATACATTGCACAGCAAAAAGACTAACTGGTCTATGTTACGTGACCTCATTGCCAAGCCTTCAAGGTTCCAGTCAGCTTGA
- Protein Sequence
- MPRKYVRKAGAKLRGVWTEDALLAAFEELRQGKYSINEISRRYGIPSRTLRRRFAKQDTKKLTLGKHPVLDFENEKRVVAHVQKLEAAGFPITRDMIRRLAYEFAEKLDIKHNFNEETRKAGPHWLQSFLERHSELSVRQAEGLSVARAQGLNREEVNKMFELLLQVFTEHDLLDKPDRIFNIDETGVQLNNKPGKVIATKGAKFVHSVTSAEKGETMSIIACCNAAGNFLPPVVIIKGVNKKPEFQDGLPPGSDVYMSKKSAYVNAQLFHQWLVQHFVPRKPQGKVILLLDGHSSHTNSAEMLETAEENNIILFCLPSHSTQALQPLDRSFFKPFKTFYAAETKNWMLANKEKKINRLVAGRLIGNAWIRAATPSNAVSGFRACGIHPYNPAAIPESFFAISDLSKVFNEQENVVISEPGGLQLPHPSCSNSTLPNLVDDEIRVNSPIRCSTPPNLDPIHEISVTPDTAAPDLPDSPSLLAQQPGPSMLSSQPGPSMFSSQPGPSMLSAQPGAEIQTETPSKHLQELSPVPKIPVPLYKRGKQSAAVLTSKENITIRKNKGKRTPNIPCKSSTQSRKITKKRTRASSEEKSGSSTCASDDSFIENQLNIVKKTKRAKKIRQTNNVNTQNKIQRPVRRAQERNQISQTFNERDETLSNEPDLYQYETDECVECFEEFEKTKSKVNRKSVKRPTVKRKIPEVIDFRLNKGIPKTNTSCHSSLHLLHTTILVELQTGAKERTTKYTLHSKKTNWSMLRDLIAKPSRFQSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706891;
- 90% Identity
- iTF_00706893; iTF_00706894; iTF_00706891; iTF_00706892;
- 80% Identity
- -