Equa002048.1
Basic Information
- Insect
- Euplagia quadripunctaria
- Gene Symbol
- -
- Assembly
- GCA_963859945.1
- Location
- OY982560.1:8006087-8008376[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-08 8.8e-06 26.3 0.0 1 37 18 54 18 61 0.92 2 2 5.2 3.8e+03 -1.3 0.1 13 23 139 150 136 152 0.72
Sequence Information
- Coding Sequence
- ATGCCACGAAAGTATGTGCGCAAAGCGGGTGCGAAACTTCGAGGTGTGTGGACTGAAGATGCTCTTTTAGCCGCCTTTGAAGAACTGAGACAAGGGAAATATTCTATTAATGAAATTTCCCGTCGGTACGGTATTCCATCTAGAACCCTAAGGAGACGATTTGCGAAACAAGATACAAAAAAACTGACACTAGggAAACACCCAGTTTTGGATTTCGAGAATGAGAAACGGGTCGTCGCACATGTTCAGAAATTAGAGGCTGCAGGATTTCCTATAACACGAGATATGATACGAAGACTAGCTTATGAGTTTGCTGAAAAACTTGACATAAAACATAACTTTAACGAAGAAACTCGCAAAGCTGGACCACATTGGCTACAGTCTTTTCTGGAACGGCACTCAGAACTTAGCGTTCGACAAGCAGAAGGTTTATCTGTTGCTCGAGCTCAGGGACTGAACCGTGAAGAAGTTAACAAGATGTTTGAGCTCTTGCTTCAAGTTTTCACAGAGCATGATTTACTGGATAAGCCAGATCGTATATTTAACATTGACGAAACTGGGGTCCAATTAAATAACAAGCCAGGAAAAGTTATTGCCACGAAAGGCGCAAAATTTGTTCATTCTGTAACATCAGCAGAAAAAGGGGAGACAATGTCGATTATAGCCTGCTGCAATGCTGCTGGAAATTTTCTACCTCCAGTTGTTATTATAAAGGGAGTTAACAAAAAGCCAGAATTTCAAGATGGACTTCCACCTGGCTCAGATGTTTACATGAGCAAAAAATCAGCGTATGTGAATGCGCAGTTATTCCACCAGTGGCTAGTACAGCATTTTGTACCCCGGAAGCCTCAAGGTAAAGTTATTTTGCTTCTAGATGGCCATTCTTCCCACACTAATTCTGCTGAAATGTTAGAGACTGCAGAAGAAAAcaacataattcttttttgtttaccaAGCCACAGTACACAAGCTTTACAACCTTTGGATCGCAGCTTTTTTAAgccttttaaaactttttatgccGCTGAGACCAAAAACTGGATGCTtgcaaacaaagaaaaaaaaattaatcgattaGTAGCTGGTAGACTGATTGGTAATGCATGGATCAGAGCGGCTACACCTTCTAATGCTGTTTCAGGGTTTAGAGCTTGCGGTATTCATCCCTATAATCCGGCTGCTATTCCAGAAAGTTTCTTTGCAATTTCCGACTTGTCTAAAGTCTTTAATGAGCAGGAAAACGTTGTAATTAGTGAACCTGGTGGATTACAATTACCTCATCCTTCATGTAGTAATTCGACGTTACCAAATTTAGTTGACGACGAGATTCGTGTTAATTCACCTCTACGATGTTCTACGCCACCGAATCTCGATCCAATTCATGAGATCTCTGTAACCCCTGACACAGCGGCACCGGATCTTCCTGATTCTCCATCCTTGCTTGCGCAACAGCCTGGTCCGTCTATGCTTTCTTCACAGCCTGGTCCATCTATGTTTTCTTCGCAGCCTGGTCCATCTATGCTTTCTGCACAGCCGGGTGCAGAAATACAAACAGAAACGCCTAGTAAGCATTTACAAGAATTATCTCCCGTGCCGAAAATTCCGGTGCCGTTATACAAAAGAGGAAAACAGTCAGCTGCTGTATTAACTTCAAAGGAAAACATTACGATTaggaaaaataaaggaaaacgTACTCCTAACATTCCATGCAAAAGCAGTACGCAGTCCAGAAAGATTACTAAGAAGAGGACTAGAGCATCTTCTGAAGAAAAAAGTGGAAGTTCAACTTGTGCTTCTGATGACTCTTTCATTGAAAACCAACTTAATATTGTGAAAAAGACAAAGAGAGCTAAAAAAATTAGACAGACTAACAATGTGAATACCCAAAACAAAATTCAGCGTCCTGTTCGCAGAGCTCAGGAAAGGAACCAAATCAGTCAAACTTTCAATGAAAGAGACGAAACTCTTTCAAATGAGCCAGACTTATATCAATATGAGACGGATGAATGTGTGGAATGTTTTGAAGAATTCGAAAAGACAAAATCTAAGGTAGACTGGATTCAGTGTGTCCTGTGTAAAATGTGGCTGCACGAAACCTGCACAATGTACGGCGATTACTGTAACCCATGTCAACGTTTAAAATTACGTCAAGAAAAAAGAACAACGTTTAACACTAAAAAATGA
- Protein Sequence
- MPRKYVRKAGAKLRGVWTEDALLAAFEELRQGKYSINEISRRYGIPSRTLRRRFAKQDTKKLTLGKHPVLDFENEKRVVAHVQKLEAAGFPITRDMIRRLAYEFAEKLDIKHNFNEETRKAGPHWLQSFLERHSELSVRQAEGLSVARAQGLNREEVNKMFELLLQVFTEHDLLDKPDRIFNIDETGVQLNNKPGKVIATKGAKFVHSVTSAEKGETMSIIACCNAAGNFLPPVVIIKGVNKKPEFQDGLPPGSDVYMSKKSAYVNAQLFHQWLVQHFVPRKPQGKVILLLDGHSSHTNSAEMLETAEENNIILFCLPSHSTQALQPLDRSFFKPFKTFYAAETKNWMLANKEKKINRLVAGRLIGNAWIRAATPSNAVSGFRACGIHPYNPAAIPESFFAISDLSKVFNEQENVVISEPGGLQLPHPSCSNSTLPNLVDDEIRVNSPLRCSTPPNLDPIHEISVTPDTAAPDLPDSPSLLAQQPGPSMLSSQPGPSMFSSQPGPSMLSAQPGAEIQTETPSKHLQELSPVPKIPVPLYKRGKQSAAVLTSKENITIRKNKGKRTPNIPCKSSTQSRKITKKRTRASSEEKSGSSTCASDDSFIENQLNIVKKTKRAKKIRQTNNVNTQNKIQRPVRRAQERNQISQTFNERDETLSNEPDLYQYETDECVECFEEFEKTKSKVDWIQCVLCKMWLHETCTMYGDYCNPCQRLKLRQEKRTTFNTKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00706891;
- 90% Identity
- iTF_00706895;
- 80% Identity
- -