Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000016.1:5288724-5297648[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.62 46 5.4 0.6 1 23 54 77 54 77 0.95

2 21 0.25 19 6.6 5.6 1 23 84 107 84 107 0.98

3 21 5.1 3.8e+02 2.5 3.9 1 23 182 204 182 204 0.97

4 21 0.002 0.15 13.3 1.0 2 23 210 231 209 231 0.97

5 21 2.5 1.9e+02 3.5 1.5 1 23 237 259 237 260 0.94

6 21 0.2 15 6.9 3.4 2 22 493 513 492 513 0.95

7 21 5.7 4.3e+02 2.4 0.4 1 20 609 628 609 631 0.70

8 21 0.69 52 5.3 0.3 2 23 763 784 762 784 0.96

9 21 0.045 3.4 9.0 1.3 3 23 859 879 857 879 0.96

10 21 0.036 2.7 9.3 0.5 1 23 887 909 887 909 0.97

11 21 0.15 11 7.4 3.5 1 23 948 970 948 970 0.95

12 21 0.00028 0.021 15.9 4.0 1 23 979 1001 979 1001 0.99

13 21 0.11 7.9 7.8 2.0 1 23 1082 1104 1082 1104 0.98

14 21 0.01 0.78 11.0 1.3 1 23 1157 1179 1157 1179 0.97

15 21 0.06 4.5 8.6 0.1 2 23 1186 1207 1185 1207 0.97

16 21 0.081 6 8.2 2.1 1 23 1274 1296 1274 1296 0.94

17 21 0.017 1.2 10.4 0.9 1 23 1302 1324 1302 1324 0.95

18 21 0.0078 0.58 11.4 2.6 1 23 1414 1436 1414 1436 0.97

19 21 0.00019 0.015 16.4 1.4 1 23 1442 1464 1442 1464 0.99

20 21 0.37 27 6.1 2.0 1 23 1553 1575 1553 1575 0.96

21 21 0.0033 0.24 12.6 3.7 1 23 1586 1608 1586 1608 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.62	46	5.4	0.6	1	23	54	77	54	77	0.95
2	21	0.25	19	6.6	5.6	1	23	84	107	84	107	0.98
3	21	5.1	3.8e+02	2.5	3.9	1	23	182	204	182	204	0.97
4	21	0.002	0.15	13.3	1.0	2	23	210	231	209	231	0.97
5	21	2.5	1.9e+02	3.5	1.5	1	23	237	259	237	260	0.94
6	21	0.2	15	6.9	3.4	2	22	493	513	492	513	0.95
7	21	5.7	4.3e+02	2.4	0.4	1	20	609	628	609	631	0.70
8	21	0.69	52	5.3	0.3	2	23	763	784	762	784	0.96
9	21	0.045	3.4	9.0	1.3	3	23	859	879	857	879	0.96
10	21	0.036	2.7	9.3	0.5	1	23	887	909	887	909	0.97
11	21	0.15	11	7.4	3.5	1	23	948	970	948	970	0.95
12	21	0.00028	0.021	15.9	4.0	1	23	979	1001	979	1001	0.99
13	21	0.11	7.9	7.8	2.0	1	23	1082	1104	1082	1104	0.98
14	21	0.01	0.78	11.0	1.3	1	23	1157	1179	1157	1179	0.97
15	21	0.06	4.5	8.6	0.1	2	23	1186	1207	1185	1207	0.97
16	21	0.081	6	8.2	2.1	1	23	1274	1296	1274	1296	0.94
17	21	0.017	1.2	10.4	0.9	1	23	1302	1324	1302	1324	0.95
18	21	0.0078	0.58	11.4	2.6	1	23	1414	1436	1414	1436	0.97
19	21	0.00019	0.015	16.4	1.4	1	23	1442	1464	1442	1464	0.99
20	21	0.37	27	6.1	2.0	1	23	1553	1575	1553	1575	0.96
21	21	0.0033	0.24	12.6	3.7	1	23	1586	1608	1586	1608	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAGGACGGCGAGGTCACTACGATTGCGCGCCCGTTCGAAAGTCGCTTCTCGGTGGACGTTTCTTCGGAGGCCTCCTCGGACGCGACGGAAGAATTCGAACTTCCGCAGTGCAAAATACGAAGAAACTATAACTGTCTGAAGTGCACTTATAGTACGCAGAATCCGCGCGCGTATCTCGTGCACACGCGAGACATTCACTtcggaaaatttaaaatatatgagTGTCATCATTGTATCTATGCCTCCAGGCATCAGCAGAAACTTTTGAGACATATAAAGATGGTTCACGGAATGACGTCGACTACGTCCTCTACCGTCAGAATGGAGACGGAGAGCAGCGCCGGCGCCGTCGAGAATGCAGCGGAGAACATGGAGGACCTTCTGGAGGAGATCGAGGAGTGCGACGACTCGCAGGACATGGAGGTGGACGAGGGCGAGCGGCCCGACGAGGCCGAGCTCGCCGGCTCCAGAAACACCAACTCCGGATTACCGAAGGGGAAAGGGAAGTTCTTCTCCTGCGACAAATGCAACTACGTGACTCACATTAAAGCGAGATACACGAAGCACGTCAAGTACCACTCGATGCCTATGATCAAGTGCACTATGTGCGACTTCCGAACGCCTTACAAATGGAATCTGGATCGTCACATGAAGAACCATGGAGGGAATGGTAGCTTCGTGTGTTCGAAGTGTACTTTTACAGCGGATATCAAGCAGAGCCTGACTGTGCACGAGATGAATCACCACACGCCGCCAGTGGGGGTCGCGGGGGCAGGGCGCCGCCGCAACCGGGTGGGCGCCAGCGACCTCACGGCCGCCGCTGCGGACTGCGCCGCCAAGGAGGAGGAAGGCAGCGGAGATTCCCGCTCCTCGCACCTCTCGGATCTAATGGAGCAATACGCAGAAAGGGAAATTGTGAGCTGTAATAGTGATTCAAATGATACTGGTCCATCGCAAGTCAACTCAAACAGGGACGAAAATCAATCAGCTCAGGGCACGTCCGGTCAAAACTCCCCTAACTCAAGCAACGAAGATAAATCCAACAAACAGAACAAAAAAGCACCCAGACCTATTCCACAACTGATCCCCCTAAACGCATCAACCCCGAATCAAAAAGCATCTGGCGAGCCGCCAGCGAAGAAATTCAAAGAATCTTCTAATTTAGATATAACAAGCACCTTTGAAAACCTACCCGGGGATATCACTGTAACCCCCGTAATCAACACACCAAAAGAAACCGTACTCCGCAAGAAAAATGAATCATTTTTCGataaattaaaagaaagatTACTAACGGAAACCGGTAAAGAAGGATCATTGAAATGCAAAAACTGCGGATTCGAGAGCAAATGTCTCTCCGAACATTCTGTGCACGAAAAGAACTGTGCCGCGCAAGCCAGCCGTGTAATGATGAGTACTGCGCATTCCAGCATGGGCTCCACTCGCTGCCAAAACTGCCGCCACCGGTGCAAATCCAGTGCAGATCTCTACGTACACATGCAAACATGCGGCAAGAAAGAAATCACACCGAACGCACCAGAAACAAAACCGGTAACCGCCGAGGCTACCACCTCAAGTTACGATCAAGACGCGGAGCCGCACCCCATGGAGAACGTGGTCTTTGTGTGGAATAACATAAACCAAGGCAATAAATTCGAAAGACCACTTGATATTAACATCAACGACGATTCAACCATGCCGGAGACGCAGAGAAATGACGACACAGAAACAGTCGATGACAACGAAGGCATGAATCTGTCTCCAAACAGTATAAGTCTCGGTAAGAACGTTTACAAATGCCCCGACTGCAAATTCTGGGCTGCAACTGCGTCTAGATTCCACGTTCATATTGTAGGACATTTGAACAAGAAGCCGTTCGAATGCTCGCTCTGTAAATACAAGTCCAATTGGCGCTGGGATATAACAAAGCATATTAAATTGAAGTCTGCTAGGGATCCGGAGCACAATGATGCTAAAGTGCTGATGACAGATGAGACGGGTAGACGAAACTACAGCAAATACAACAAATTCCTAGCTGTACCGATTGTAAGCGAGAGCGGTGAGAATGAATTCCACTTTATTGATCAGAACACAACCTTGGATGCTTCGATGGAGTTAGATGAGTCGTTGCACGATAACGGAGAAATAGTGAGCACTTCGTATGATATGCAACCGTTGAACTTGCAAACGCAATTTGCTGATCAGTATAACTCAATTGATGGTCAAGATAAGAAACCGAAGAGGACTTTGTGGAAGTGCAAAAAGTGCAATTACAAGGACCCGTCGAAGGCAGCGTTGCTGGAGCACGTGAGACAGCACTCGAAAGACAGCCTGGATGACCCTCAGGCGAAGAAAGCTGACGCTATCGATCCGGCTGACTTGGCGTACCGCTGCGGACACTGCAACCAGTTGTCCAATTGGAAACATGTCATACAGAGACACTGCCGCTTGAAGCATGACGGAATAGTAAAAGTGATAACAACGGTGAAGCCCAAACCTGAACCCGCTCCACCAGCAAGCACTGAACCATTCAGCGACTTCTGCTCCAAATGCCCCTTCAGGACCAACGACAAGACGCTCCTAAAAGAACATCTCCAACAGCACCGCCCATCTTCACAGTCCATCTTCAAATGCTACTTCTGCCCTTACTTCGTCAAAGACGAGCAAGATCTGATCCAACATCTTTTACTGCATGGCATAACTGACCCTGAAGAATATATCTCAAAGGCGATGGGCTGCAAGTCTCCTCTGCCCGACCACGCCGCGTCCTTGCACGAAACGACCGTCCCCAGCACCGTCAACAAGCGGCACAAGTGTCAAGAGTGCCCCTATGAAACCAACAGCAAATCGCAGTTCATGTATCACGAGCAATTCCATCGCACCACCTCCGCTGAGACACCCTACAAATGCCCCGAATGCAACTACAGCGTCTCCAAGAGACATCTTCTTCACCAACACTTGAGAGTTCACGGAATTTTCTCCAAGAAGAACGAAAGCGAAGCGGAACTTGAAGCATCCACGTCATCACTCCAGAAAGACAGATCGGACAGCTTTACTGACGAAATCCCTTATGTGTGGGTATCAGCGAGAAATGAATTCCACAAAATGTACAAATGTCGCTATTGTTCTTACGTTAATTCTCAGAAATGTAAGATACCTAACCACGAGAAGATTCACTGTCTCGGTTTCGAAAATAGCGAAGTGataatatacaaatgtttaGAATGTAAATATACATGTGATAATGCCGCGAGACTGGCGGAACATTCCAAGAAGCACGGCCTCCTGTACGGTCGAATTTACAGCTTCGTAGAAGAAGATATCCCTGATGAGGATCAAATATCTCGGCTGCGGCGAGTTATTGAACTTGAAAAGAATGATGATTCTGCACCAGAAGATAACGCAGTTTCTGACACgaaagaaattaaaatcttATACTTTTGTCAAAAGTGTCCAGCCAGATATTTTACTGAAAGCGAATTGAAGACTCATGGAAAATCTCATGACCTATCAAATGGTAATAAATGTAAGAATTGTGAATTCTCAGTGCCTGACGAAGCGAAACTTATAGCTCACCAGTCTGTGCACTCGGACGAGCACAACATTAGAACAAACATGCTTAAGTTTATTCACAATTCACATTCTCTTTATAAGGAGCCCCGACTCGAATCCAACCGTAGTTCTGAATCTGCGGAATTGACTTGGTCAGTTGCAGTCAATTACAAAAGTAATGAAAACGTGGACCATTTTCCGAAGAAAACGGAAACAAAACACACACCCAAGCAGTACTGTTGTAAAGAATGCCCAGCCAAGTTTTTCAAAACTTCGGCACTCACATACCATTTGGGATTACACGGTGGCGATGGAGACCACAAGTGCAAGAAATGCAGCTACGCTGTAAAGAACGTTGGCAATTTGGCTAAACACGAAATTTTACATGAAAATGAAAGTAAATCGCCGAATCATGAATACGAATCTGGCGATGATTTGGATTTCAAAAACATTCCTCTCTCAGGAACAGACCTATTTCAAAGAAAGACTGAAGCTCAGAAAAGAGTACTGACTGATAAAGACAAATTAGTTAAACCGAATGATCATTTTCCGCCTGTGTTACAAGCAGATCCACAATTTGGATATTTGATGCATGGTAATCCTGAATTCATCTATCCCACGTATCTGAAAAACGGACGACAAAAGGAAAAACGATACAAATGCCATAAGTGCCCTTCAGCTTTTGAAAAGCGtgaacaatacaaaatacatttatctCTTCACGGTTCTAAACAAAGATATAAATGTGAGTTATGTGACTATTCTGTGAAATATTATGCGAATTATGTTCAACATATGCGTAAGCATCAAATGAATGACGAGGCTCAGGCCGAAAGACTTAAAGGAACCAACGGTGACCCCGAAACTCAAGAATTAAAGCAAGAAGATGGTACAGACAACATTAAGCTAGCGATCAAAACGATGCCTAAAGGAACACCAAAATCCGATTTTCAACAGTTTTCAGTAAGAGATCAACAAACCCTTCGGCTGTTGCAGCTTATGAGATCTATGAATAATGGTGAAAAAGATCCAAGCGCCGCTGAAACTTCGCCGGTGAAGGAGCGTAAAATGCATATGTGTCTCCTTTGCCCTTACACGAATCAGCGGCAAGATGCTTTGAACAATCATTACAGAAGACATGATGACACAGATTCACTGAATTTTTCCGGTCACAAGTGCTCCTATTGTGACTTAGTAGTTGTGCAATCACATTTCTTACGGGAGCATCTAAAAACACacttcaattttaataaaactcttACACCTGAATGTTTCCTAGCTAACGATGATGTCAGTTTTACTATAACGAAAGTGGATGAGGAAAGCGAAGAACCAGTTGATCTCAAAttagaaatgaaaaatatgattttaccgTGCAATGATGATAGGATATTAGTTAAGATAAAGACAGGGGAACTTGTGGTAGAATAA
Protein Sequence: MLQQMSSSLSAQDGEVTTIARPFESRFSVDVSSEASSDATEEFELPQCKIRRNYNCLKCTYSTQNPRAYLVHTRDIHFGKFKIYECHHCIYASRHQQKLLRHIKMVHGMTSTTSSTVRMETESSAGAVENAAENMEDLLEEIEECDDSQDMEVDEGERPDEAELAGSRNTNSGLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGNGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGVAGAGRRRNRVGASDLTAAAADCAAKEEEGSGDSRSSHLSDLMEQYAEREIVSCNSDSNDTGPSQVNSNRDENQSAQGTSGQNSPNSSNEDKSNKQNKKAPRPIPQLIPLNASTPNQKASGEPPAKKFKESSNLDITSTFENLPGDITVTPVINTPKETVLRKKNESFFDKLKERLLTETGKEGSLKCKNCGFESKCLSEHSVHEKNCAAQASRVMMSTAHSSMGSTRCQNCRHRCKSSADLYVHMQTCGKKEITPNAPETKPVTAEATTSSYDQDAEPHPMENVVFVWNNINQGNKFERPLDININDDSTMPETQRNDDTETVDDNEGMNLSPNSISLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPIVSESGENEFHFIDQNTTLDASMELDESLHDNGEIVSTSYDMQPLNLQTQFADQYNSIDGQDKKPKRTLWKCKKCNYKDPSKAALLEHVRQHSKDSLDDPQAKKADAIDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIVKVITTVKPKPEPAPPASTEPFSDFCSKCPFRTNDKTLLKEHLQQHRPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEEYISKAMGCKSPLPDHAASLHETTVPSTVNKRHKCQECPYETNSKSQFMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFSKKNESEAELEASTSSLQKDRSDSFTDEIPYVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKYTCDNAARLAEHSKKHGLLYGRIYSFVEEDIPDEDQISRLRRVIELEKNDDSAPEDNAVSDTKEIKILYFCQKCPARYFTESELKTHGKSHDLSNGNKCKNCEFSVPDEAKLIAHQSVHSDEHNIRTNMLKFIHNSHSLYKEPRLESNRSSESAELTWSVAVNYKSNENVDHFPKKTETKHTPKQYCCKECPAKFFKTSALTYHLGLHGGDGDHKCKKCSYAVKNVGNLAKHEILHENESKSPNHEYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERLKGTNGDPETQELKQEDGTDNIKLAIKTMPKGTPKSDFQQFSVRDQQTLRLLQLMRSMNNGEKDPSAAETSPVKERKMHMCLLCPYTNQRQDALNNHYRRHDDTDSLNFSGHKCSYCDLVVVQSHFLREHLKTHFNFNKTLTPECFLANDDVSFTITKVDEESEEPVDLKLEMKNMILPCNDDRILVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00704516;
80% Identity: -