Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000003.1:2300107-2322625[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00038 0.028 15.5 2.3 1 23 25 47 25 47 0.93

2 14 0.0051 0.38 12.0 1.0 1 23 52 75 52 75 0.96

3 14 0.00035 0.026 15.6 4.0 1 23 81 103 81 103 0.98

4 14 1.2e-06 9.1e-05 23.4 0.4 2 23 110 131 109 131 0.96

5 14 0.00012 0.0088 17.1 6.2 1 23 137 159 137 159 0.98

6 14 0.00016 0.012 16.7 0.3 1 23 166 189 166 189 0.93

7 14 0.057 4.3 8.7 0.4 2 23 198 220 197 220 0.91

8 14 2.1e-05 0.0016 19.5 1.0 2 23 227 248 226 248 0.97

9 14 0.0059 0.44 11.8 3.2 1 23 254 278 254 278 0.94

10 14 0.14 10 7.5 7.5 1 23 283 306 283 306 0.94

11 14 6e-05 0.0045 18.0 0.6 2 23 314 336 313 336 0.97

12 14 0.062 4.6 8.6 0.5 1 23 344 367 344 367 0.95

13 14 5.4 4e+02 2.4 4.3 1 20 939 958 939 961 0.90

14 14 0.0018 0.14 13.4 3.1 1 23 1114 1136 1114 1136 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00038	0.028	15.5	2.3	1	23	25	47	25	47	0.93
2	14	0.0051	0.38	12.0	1.0	1	23	52	75	52	75	0.96
3	14	0.00035	0.026	15.6	4.0	1	23	81	103	81	103	0.98
4	14	1.2e-06	9.1e-05	23.4	0.4	2	23	110	131	109	131	0.96
5	14	0.00012	0.0088	17.1	6.2	1	23	137	159	137	159	0.98
6	14	0.00016	0.012	16.7	0.3	1	23	166	189	166	189	0.93
7	14	0.057	4.3	8.7	0.4	2	23	198	220	197	220	0.91
8	14	2.1e-05	0.0016	19.5	1.0	2	23	227	248	226	248	0.97
9	14	0.0059	0.44	11.8	3.2	1	23	254	278	254	278	0.94
10	14	0.14	10	7.5	7.5	1	23	283	306	283	306	0.94
11	14	6e-05	0.0045	18.0	0.6	2	23	314	336	313	336	0.97
12	14	0.062	4.6	8.6	0.5	1	23	344	367	344	367	0.95
13	14	5.4	4e+02	2.4	4.3	1	20	939	958	939	961	0.90
14	14	0.0018	0.14	13.4	3.1	1	23	1114	1136	1114	1136	0.98

Sequence Information

Coding Sequence: ATGGATAAAAATAAGaaaaaaacaaAGGCAAAAGACCCAAGGAAGAATGTCAATAAGCCAAAAAAGAAACCTTTCAAATGTAAAGTTTGCAGCAAGGCATTTAGTGACCGCTGCAACTTGTCTGTTCACTCAGCGCTTCACAAAGATGAGTCTTTCCCCTGCCCGCTGTGTCAGTACATCGGAAAGACCAAGAAGTATCTATCCAGGCACAAAAGACAGGTTCATACAGAGCGCAATCAGcacaaatgtacctactgtgGTAAATTCTTCCTGCACCCGAGCGATCTTAGAGATCATACGATGGTGCACAccggtgaAAAACCTCTTTCTTGCAACGTGTGCGGCAAGTCTTTCAGGGTTTCGTATTCACTCAACACACATATGTTAATACATACAGATGAGAAACCATTTCGCTGTTCCTTTTGTGACTACTCCTGTCGTGACAGCTCAACCTTACGAAAACACCAAAACAAGCATATGGGAATGGAGAGCGTTTATCAATGCAAAATATGCAGTAAGGGATATAAATCAAAATGGACGCTAAAGATTCACGTCGCCGAAGCTCATTTAGACGTCGATGTAAAGAAAATACCGTGCGGGCAATGTGATAGACGGTTTAAGACGATCAGCCAAAGGAATGGTCATGTGAAAGCGAAACACAACCGTGCCCTGACCTGCACGTGCCCTGTATGTGGCATCCGACTGGCAACCAAGTACAACCTGAGCGATCACATGCGTCGGCACATGGATGAGCGACCCTTCGCTTGCACACATCCGGGGTGTACACTGGCTTTTAAGAATAAGGGCTGCCTCCAAAAGCACACAAAAATCCACGAGCCGCCGCGCTTCGCGTGCTGTCACTGCGGTCGTAAGTTCGTGCGCAAGTGTCACGCGACGCAGCACGTGATAGTCATGCACGAGCGGCGCACGCGCAGCGTGCAGTGCGACTACTGTGGAGCCAAatTCTACTCCAAAAACTACCTGCTGAAGCacatacaaatgaaacacattcACAAACACAACTTTAAATACACATGTGATATTTGTGGATTGACAACACACAACAAGCCTAGCATTGTTATGCACCTCAAATATGgacatgataatgataatGATCTACAATGCAAGCTGTGCGATAACAAGGTCGTGTACAAGAAACATTTGTATCTAAAATCGCATTATTGGAAGACTCATAATGTTAAGTACAAGATCGATGCTAAGAGAACCGCTAGACCTAACAAGGAAGATACAACTCCGAACGTACAAATAAAAGTAGAGCCAATCGATGCGGAGTCCTACGAAGAAATACAGCTGTTAGATGTTGAAAAGCAGGAGCATGTCTCTGAAGATGACAACGAATCTCTTGACTATTCTAAACAAGTTCTGTCGGAAGATATAACAGCTCTAGTTCTGAGAGATAGTAAAGTGGAAGGGAAAGAAGTGGACTTTGATGACTTCTACATAAGGCATATTATGGCTAAGCAGGAGGAAAAACGAGATGAACCCAAACCATATGTTGCCGTTAATATAGAACAAGATCAAGACGTAAAACGAAAAATTAAGTACATTCTTATACGCACCCAAAAACTAGAGAAAGCAAAGGAAGAGCGcaagaagaaaaaagaagaagagaGGTTGAGAaaggaaaaagaagaagaagaggcTCGGATAAGAGAAGAGGAAGAGAGACAAGAGATTATTGAGTTAAGGAGAGTGAGAGATTTGTATAATGAAAAGATGAAAGCGGCAGCGGAAAGAGAAAAACTGAAGAAAGaaaaagtaaatattaaatactttaagaAGAAACCAGAAATCAGCAAAACGTATGCTGTTATAGATGATGATAACGATTTAGACAAAGAATCTACAGAAAATGATACAACAACGAACATATCAGTGACCAATGATGATACAGATGATGACGAGGACAACACACCACTAAAtagtttaaaaactaaaatgaacaGTAGCGTTGATGAAAACGTTGATGAGTCTACAAACACTgatgaaaatgttaatttaaacACTGTTGAGAAAGATTTAGCGAATGaacttaataaaaacaacacagAAAATGAAAATATGGACATTGATGAAGATTTGAATATTGCTAATATAGTTTTTAGTGCAGGACACACTATTGTTAATAAAAATGAAGTTGTTAGTCAACTTGTCCATACAAATGATACTGATCTCTCAGCTAATGGCGATAGAGTACAAACTAGCCATGTAAGTCATAATAAAAACGACACTGATGTCGATAACCTAGAAATGCTTAAGGATAAAAGCTATACTGATCAAACTTGTATCAGAAATGACGAAGAAAATGATTGTCAAcaaaataatgatgaaaaagATAATGTTGATAAAAACCATGaccatacttatattaaaaatcataatgatgataataaagtAACACAAGACGAGCAAACTACACAACAAGACTTAATAGATAAAGAAAAAACAGAGGAACAAGTTACTGAAGGTgcaaaattaattgaaaatgatCAAAAACAAATTGATTCTGATGATGTTGGAAATAATCATCGTATAGACAGAAATGTTAATGATGAAAACAATGATGACGAAattattaacaatgaaaatgaAGTTGTAAACAGTGATACAGAAGTTGTTGACAAAGACAATGATTTCTGCaacaatgaaaatgaaataaacagcGACAGTGCTTACGATAAACctctaaaagaaagaaaatgcaaaaaaaaatcaatgagaGATTTAGATTATGAAGTTGATGATAAGGAAGTTGTTTGTAAAAAGAAAGCTAATAAGATTGAGTTTAAGACACATCAGTGTTATGTTTGTTTCAAGCTTTACCAAACAAAAGAAGAACTTATAAACCACTGCCAAGAACACTTCGATATATGCAACGAAAGGACACTCGGAAAATGCCCTATATGCAACCATGTTAGCTACAAAGTAACCGGGCATATGCGACGTGTTCACAAAGTTGGTATCAAGGTCCCTTTCAACAAATTAAAGGATAGAAAGACTACAGATGGATCCAGATACTGCTACGAAATCGACGGAGGCGAAATAGAAGTTATACCAAGCATCAAAATACTGAATAAGACTGCTAGCATGGAAATAGACAAGAAGCGGCgtgaaaaaaaagataaaaccaTAGCTAGAACAAAACTAGTTAAGAAAGGTAATGCGTGGATTGTCGAAAAAGAGTATTTAGATCTAACATATGATGAGTTACCAGAATTAACTGATATAGAACTAACGAAATGCAAAGTTACTGGTAACGATATCGATAGGCTGGGTCAGATCAGTCGTATAGCGAAGAAGAAAGGATTGAAAATGATGTTTCCGTGCTTCGAATGCGATAAAGTATGTCAGAACTTTAGTGCATTGAAACTGCATAAGAGAAGGCATGAAGTTAACCCTAAGCCTTTCGCGCCGAGGATTAAAAACGGGGCGCGAAGCGTGAAAAAGGAAAGTAAAATTAAGTTAGATAAAGGTAATAGAACAGCGCTTCCTAAACCTATTAAAACGAACCATAAATGTGATGAGAAGCTGAAGAAATTCTTCGAAAGCAACATTAGAGGTGGTGATATAGAATTCTGGCAGTTCTTAAAGATCTTCAACAAAATTGACCGTGAAAAAGTCAGTGATTTCAAAGATTTGGAAGAGAGAAGCGATTTTGGTAACCATTTAGATTATTACAAGGATGATGACAATGATGAAATGGTTGAAATGGCTAAAGAAATTGATAAATATATTGATGTAGATGATAATGATAGTGAAATCGTTGAAGATGATGAAAAGATTGCAGAAAGTGGTGATGAATcatag
Protein Sequence: MDKNKKKTKAKDPRKNVNKPKKKPFKCKVCSKAFSDRCNLSVHSALHKDESFPCPLCQYIGKTKKYLSRHKRQVHTERNQHKCTYCGKFFLHPSDLRDHTMVHTGEKPLSCNVCGKSFRVSYSLNTHMLIHTDEKPFRCSFCDYSCRDSSTLRKHQNKHMGMESVYQCKICSKGYKSKWTLKIHVAEAHLDVDVKKIPCGQCDRRFKTISQRNGHVKAKHNRALTCTCPVCGIRLATKYNLSDHMRRHMDERPFACTHPGCTLAFKNKGCLQKHTKIHEPPRFACCHCGRKFVRKCHATQHVIVMHERRTRSVQCDYCGAKFYSKNYLLKHIQMKHIHKHNFKYTCDICGLTTHNKPSIVMHLKYGHDNDNDLQCKLCDNKVVYKKHLYLKSHYWKTHNVKYKIDAKRTARPNKEDTTPNVQIKVEPIDAESYEEIQLLDVEKQEHVSEDDNESLDYSKQVLSEDITALVLRDSKVEGKEVDFDDFYIRHIMAKQEEKRDEPKPYVAVNIEQDQDVKRKIKYILIRTQKLEKAKEERKKKKEEERLRKEKEEEEARIREEEERQEIIELRRVRDLYNEKMKAAAEREKLKKEKVNIKYFKKKPEISKTYAVIDDDNDLDKESTENDTTTNISVTNDDTDDDEDNTPLNSLKTKMNSSVDENVDESTNTDENVNLNTVEKDLANELNKNNTENENMDIDEDLNIANIVFSAGHTIVNKNEVVSQLVHTNDTDLSANGDRVQTSHVSHNKNDTDVDNLEMLKDKSYTDQTCIRNDEENDCQQNNDEKDNVDKNHDHTYIKNHNDDNKVTQDEQTTQQDLIDKEKTEEQVTEGAKLIENDQKQIDSDDVGNNHRIDRNVNDENNDDEIINNENEVVNSDTEVVDKDNDFCNNENEINSDSAYDKPLKERKCKKKSMRDLDYEVDDKEVVCKKKANKIEFKTHQCYVCFKLYQTKEELINHCQEHFDICNERTLGKCPICNHVSYKVTGHMRRVHKVGIKVPFNKLKDRKTTDGSRYCYEIDGGEIEVIPSIKILNKTASMEIDKKRREKKDKTIARTKLVKKGNAWIVEKEYLDLTYDELPELTDIELTKCKVTGNDIDRLGQISRIAKKKGLKMMFPCFECDKVCQNFSALKLHKRRHEVNPKPFAPRIKNGARSVKKESKIKLDKGNRTALPKPIKTNHKCDEKLKKFFESNIRGGDIEFWQFLKIFNKIDREKVSDFKDLEERSDFGNHLDYYKDDDNDEMVEMAKEIDKYIDVDDNDSEIVEDDEKIAESGDES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704301;
90% Identity: -
80% Identity: -