Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438635.1:8950476-8979058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.07 5.9 8.5 5.6 1 17 25 41 25 47 0.86

2 15 0.0031 0.26 12.7 2.1 1 23 52 75 52 75 0.96

3 15 0.00014 0.012 17.0 2.3 1 23 81 103 81 103 0.98

4 15 1.3e-06 0.00011 23.3 0.4 2 23 110 131 109 131 0.96

5 15 0.00052 0.044 15.1 8.8 1 23 137 159 137 159 0.98

6 15 0.00023 0.019 16.3 0.2 1 23 166 189 166 189 0.92

7 15 0.057 4.8 8.7 0.5 2 23 198 220 197 220 0.92

8 15 5.7e-05 0.0049 18.2 1.6 2 23 227 248 226 248 0.97

9 15 0.072 6.2 8.4 5.1 1 23 254 278 254 278 0.94

10 15 4.8e-05 0.0041 18.4 3.1 1 23 283 306 283 306 0.93

11 15 3.7e-05 0.0031 18.8 0.8 2 23 314 336 313 336 0.97

12 15 0.067 5.7 8.5 0.5 1 23 344 367 344 367 0.95

13 15 3.9 3.3e+02 3.0 4.4 1 20 967 986 967 989 0.90

14 15 1.5 1.2e+02 4.3 1.5 2 23 1000 1019 999 1019 0.91

15 15 0.002 0.17 13.3 3.1 1 23 1142 1164 1142 1164 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.07	5.9	8.5	5.6	1	17	25	41	25	47	0.86
2	15	0.0031	0.26	12.7	2.1	1	23	52	75	52	75	0.96
3	15	0.00014	0.012	17.0	2.3	1	23	81	103	81	103	0.98
4	15	1.3e-06	0.00011	23.3	0.4	2	23	110	131	109	131	0.96
5	15	0.00052	0.044	15.1	8.8	1	23	137	159	137	159	0.98
6	15	0.00023	0.019	16.3	0.2	1	23	166	189	166	189	0.92
7	15	0.057	4.8	8.7	0.5	2	23	198	220	197	220	0.92
8	15	5.7e-05	0.0049	18.2	1.6	2	23	227	248	226	248	0.97
9	15	0.072	6.2	8.4	5.1	1	23	254	278	254	278	0.94
10	15	4.8e-05	0.0041	18.4	3.1	1	23	283	306	283	306	0.93
11	15	3.7e-05	0.0031	18.8	0.8	2	23	314	336	313	336	0.97
12	15	0.067	5.7	8.5	0.5	1	23	344	367	344	367	0.95
13	15	3.9	3.3e+02	3.0	4.4	1	20	967	986	967	989	0.90
14	15	1.5	1.2e+02	4.3	1.5	2	23	1000	1019	999	1019	0.91
15	15	0.002	0.17	13.3	3.1	1	23	1142	1164	1142	1164	0.98

Sequence Information

Coding Sequence: ATGGCTAAAGTAAAGaaaaaaactaaGCCAAAAGAGCCAAGCAAAAATGTCAACAAGCCAAAACCGAAACCTTTCAAATGTAAAGTTTGCAATAAGGCCTTCAGTGACCGTTGCAATCTGTACTGCCACTCAGCGCTCCATAAAAATGAGGTATTCCCCTGCCCCCTGTGTCCGTACAAAGGGAAGACTAAGAAATACCTTTCAAGGCACCATAGacagGTCCATACAGAGCGCAATCAAcacaaatgtacctactgtgGTAAATTCTTCCTCCACCCGGGTGATCTTAGGGAGCACATTATGGTCCACACCGgtGAAAAACCTCTGTCTTGCAACGTGTGTGGCAAATCATTCAGGGTGTCGTATTCACTCAACACACATATGCTAATACACACAGATAAGAAGCCATTTCGCTGTTCGTTCTGCGACTACTGCTGCCGTGATAGCTCTTCGTTAAGGAAACACCAGAACAAGCATATGGGACTCGAGAGCGTTTATCAATGCAAGATATGCAGTAAGGGTTATAAATCAAAGTGGATGCTAAAGATCCACGTCGCTGAGGCACATTTAGACGTCGACGTGAAGAAAGTACCCTGCGGGCAATGCGACAGGCGGTTTAAGACGGTCAGCCAACGTAATGGTCATGTGAAAGAGAAACACAAGCGTGCCCTAGCCTGCACGTGTCCTGTCTGCGGTTTCCGTCTGGCGAGCAAGTACAACCTGAGCGAGCACATGCGGCGGCACATGGACGAGCGACCCTTCGCCTGCACGCACCCGGGGTGCTCACTGGCTTTTAAGAACAAGggTTGCCTTCATAAGCATACAAAGATCCACGACCCACCGAAATTCGCGTGCTCACACTGCGGCCGTAAGTTCGTGCGCAAGAGTCACATGATGCGACACGAGATCGTGATGCACGAGCAGCGCGCGCGCAGCGTGCAGTGCGACTACTGTGGAGCCAAattctACTCCAAAAACTACTTGTTAAAGCACATACAAACGAAACACATCCACAAACAGAAGTTCAAATACACCTGCGATATTTGCGGACTGACAACCCACAACAAGCCGAGCATCGTCATGCATCTTAAATATGGACATACTAACGATAATGACCTGCAATGTAAACTATGCGATAACAAAGTTGTTTACAAGAAGCACATTTACCTAAAATCCCACTATTGGAAAACTCATAATGTAAAGTACAAGATTGATGCTAGGAGAACAGCTAGACCtaaaaaGGAAGAAATAAAACCGGACGTACAGATAAAAGTGGAACCAATCGAAGCGGAATCGTACGAAGGATTACAACTGTTAGATGTGGACAAGCACGAACATGTGTCTGAAGATGACAACGAATCCTTAGACTATTCTAAACAAGTGCTATCAGAGGATTTAACAGCTCTAGTTCTGAGAGACAGTAAAATGGAAGGGAAAGAAGTGGACTTTGATGACTTCTACATAAGGCATATTATGGCTAAGCAGGAGGAGAAACCAGaTGTACCCAAATCATCTATAGGGGTTAACAGCGAACAAGATAAGGACGTGAAACGAAAAATCAAACATATTCTTATCCGCACTCAAAAACTGGAAAAAGCAAAGGCAGAGCGCaagaagaaaaaagaagaagagAGGTTAAGAAAGGAAAAGGAGGAAGAAGAGGCTCGGATAAGAGAGGAGGCGGAGAGACAAGAGATTATTGAGCTGAGGAGAGTGAGAGAGTTGTATAATGAGAAGATGAAAGCGGCTAAGAAAAGGGAGACAGAGATGAAAGaAAAAGTGAATATTAAATACTTCAAGAAGAAACCAGAAATCAGCAAAACAGTTACTGTGATAGATGATGAAGTTCATTTAGACAAAGAATCTACAAAAAATGATACAACAACCAACAAAACAGTGACCAATGATAACATTAATGATGatacggatgatgatgatgacaacacgccattaaatagtttaaaaactaaaaactattgTGTTGATTCTACAAACAATGAAGATATTAATAGTTTGAAGAAAAACAGTGACAATTCTGCACAAAGTGATGAACACGATGATAATTTAAACATTGCTGAGGAAGAATTAGCGAATGAAGTTAATGAAAACAACACAGACACTGATAATATGGACATTGATGAAGATTTAAATCTTGGTAACATAGTTTTTATTGAAGGAGacacttttataaataataatgaagttGTCAGTCCAACTACTAAAACAAATGATATTGATCTCTCAGACCATGGCGATACAGTACGAAATATCGATGTAAGTCATAATAAAAACCATGATGAAGTCGATAACCTAGAAAGGCCTGGTGCTGGGGATATAAGTTATACTGATCGTACTTATATCAGAAATGACGAAGGAAATGATTGTCAGCAAAATAATGATGAAAAAGATAATGGTGATAAGAACCATGACCATActtatgttaaaaataattataagacAGATAATGGAATACTAGACAAGCAAACTACTATACAAGACACAATAGACAAAGAAGTAACAAGGGAACAAATTACTGAAAGAGCAAAAGTAATTGAAAATGATCAACAACAATCTGAAATGGATTCTGATGATGTTAGAAATGATCATGGGCTAACcagaaatgatgatgatgaaaacaatgataaattaattaacaatgaCAAAGATATTGTTAACAATGACAAAGATATTGTTAACAATGACAAAGATATTGTTAACAATGACAATGAAGTAACAAACAATGATAATGAATCGTCACAGAGTGATAGTGATTTTGATAAACCTCTAAAGGAAAGAAAACAGAAACGCAAAAAGAAATCGGAAAAAGATTTAGATTATgaagttgatgatgaagatgttGTTTGTAAAAAGAAAGCAAAGAAGATGGAGTTTAAAACACATCAGTGTTATGTTTGCTTCAAGCTCTACCAAACAAAAGATGAACTAATAAACCATTGCCAAGAACACTTCGACTTATGCAACCAAAGGACACTCAGCAAATGCCCGATATGCAACCATGTGAGTTACAAACTAACTGATCACATGAGACGCATCCACAAAGTTAATATTAAAGTACCTTTCATGAAATTAAAGGATAGGAAAACTACAGATGGCTCCAAATATTGCTACGAAATCGACGGAGGTGAAATAGAAGTTATACCCAGCATCAAAATACTGAATAAGAACGCTAGCATGGAAATAGACAAAAAGAGACgagaaaaaaaagataaaacgaTAGCTACAACCAAGCTTGTTAGAAAAGGTAATGCCTGGATTGTAGAAAAGGAATATTTAGATCTGGAATTCGATGAGTTACCAGAACTAACTGATTTAGAGCTAACGAAATGCAAAGTAACCGGTAACGACATTGATAGGCTAGGTCAGATCAGTCGTATAGCGAAAAAGAAAGGGTTAAAAATGATGTTTCCGTGCTTCGAATGCGATAAAGTATGCCAGAACTTTAGTGCATTGAAACTGCATAAGCGAAGGCATGAAGTTAACCCTAAACCGTTCGCGCCGAGAGTTAAAAACGGGGCGAGAAGTGTTAAAAAGGAAAGTAAAATCAAGTTGGATAGGGGTAACAGAACAGCGCTTCCTAAACCTATTAAAACGAAACATAAATGTGATGACAGACTGAAAGAGTTTTTCGAAAGCAACATACGAGGTGGCGATATAGAATTCTGGCAGTTTTTGAAGATCTTCAACAAAATGGATCGAGAAAAGGTCAATGATTTCAAGGATTTGGAGGAGAGAAGCGATTTTGGTAACCATTTAGATTATTACaaagatgatgataatgatgaaatggTTGAAATGGCTAAAGAAATTGATAAATATATTGGAGAAGATGATGTCAGTGAAatcgatgatgatgaaataagtGAAGTGATTCCGGAAAGTGGTGATGATGATTAA
Protein Sequence: MAKVKKKTKPKEPSKNVNKPKPKPFKCKVCNKAFSDRCNLYCHSALHKNEVFPCPLCPYKGKTKKYLSRHHRQVHTERNQHKCTYCGKFFLHPGDLREHIMVHTGEKPLSCNVCGKSFRVSYSLNTHMLIHTDKKPFRCSFCDYCCRDSSSLRKHQNKHMGLESVYQCKICSKGYKSKWMLKIHVAEAHLDVDVKKVPCGQCDRRFKTVSQRNGHVKEKHKRALACTCPVCGFRLASKYNLSEHMRRHMDERPFACTHPGCSLAFKNKGCLHKHTKIHDPPKFACSHCGRKFVRKSHMMRHEIVMHEQRARSVQCDYCGAKFYSKNYLLKHIQTKHIHKQKFKYTCDICGLTTHNKPSIVMHLKYGHTNDNDLQCKLCDNKVVYKKHIYLKSHYWKTHNVKYKIDARRTARPKKEEIKPDVQIKVEPIEAESYEGLQLLDVDKHEHVSEDDNESLDYSKQVLSEDLTALVLRDSKMEGKEVDFDDFYIRHIMAKQEEKPDVPKSSIGVNSEQDKDVKRKIKHILIRTQKLEKAKAERKKKKEEERLRKEKEEEEARIREEAERQEIIELRRVRELYNEKMKAAKKRETEMKEKVNIKYFKKKPEISKTVTVIDDEVHLDKESTKNDTTTNKTVTNDNINDDTDDDDDNTPLNSLKTKNYCVDSTNNEDINSLKKNSDNSAQSDEHDDNLNIAEEELANEVNENNTDTDNMDIDEDLNLGNIVFIEGDTFINNNEVVSPTTKTNDIDLSDHGDTVRNIDVSHNKNHDEVDNLERPGAGDISYTDRTYIRNDEGNDCQQNNDEKDNGDKNHDHTYVKNNYKTDNGILDKQTTIQDTIDKEVTREQITERAKVIENDQQQSEMDSDDVRNDHGLTRNDDDENNDKLINNDKDIVNNDKDIVNNDKDIVNNDNEVTNNDNESSQSDSDFDKPLKERKQKRKKKSEKDLDYEVDDEDVVCKKKAKKMEFKTHQCYVCFKLYQTKDELINHCQEHFDLCNQRTLSKCPICNHVSYKLTDHMRRIHKVNIKVPFMKLKDRKTTDGSKYCYEIDGGEIEVIPSIKILNKNASMEIDKKRREKKDKTIATTKLVRKGNAWIVEKEYLDLEFDELPELTDLELTKCKVTGNDIDRLGQISRIAKKKGLKMMFPCFECDKVCQNFSALKLHKRRHEVNPKPFAPRVKNGARSVKKESKIKLDRGNRTALPKPIKTKHKCDDRLKEFFESNIRGGDIEFWQFLKIFNKMDREKVNDFKDLEERSDFGNHLDYYKDDDNDEMVEMAKEIDKYIGEDDVSEIDDDEISEVIPESGDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00703289; iTF_00699485; iTF_00706301;
90% Identity: iTF_00703289;
80% Identity: -