Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000043.1:2970613-2981194[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 1e-07 7.7e-06 26.7 1.5 1 23 461 483 461 483 0.99

2 8 9.3e-07 6.9e-05 23.7 1.4 1 23 489 511 489 511 0.98

3 8 8.3e-06 0.00062 20.7 0.6 2 23 520 541 520 541 0.98

4 8 1e-05 0.00078 20.4 0.6 1 23 547 569 547 569 0.99

5 8 9.8e-08 7.3e-06 26.8 2.1 1 23 575 597 575 597 0.98

6 8 1.5e-06 0.00011 23.1 2.6 1 23 603 625 603 625 0.97

7 8 1.4e-05 0.0011 20.0 6.3 1 23 631 653 631 653 0.97

8 8 0.00014 0.011 16.9 2.1 1 21 659 679 659 680 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	1e-07	7.7e-06	26.7	1.5	1	23	461	483	461	483	0.99
2	8	9.3e-07	6.9e-05	23.7	1.4	1	23	489	511	489	511	0.98
3	8	8.3e-06	0.00062	20.7	0.6	2	23	520	541	520	541	0.98
4	8	1e-05	0.00078	20.4	0.6	1	23	547	569	547	569	0.99
5	8	9.8e-08	7.3e-06	26.8	2.1	1	23	575	597	575	597	0.98
6	8	1.5e-06	0.00011	23.1	2.6	1	23	603	625	603	625	0.97
7	8	1.4e-05	0.0011	20.0	6.3	1	23	631	653	631	653	0.97
8	8	0.00014	0.011	16.9	2.1	1	21	659	679	659	680	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTGTCTTTGGGAGAATGGAGCGACGTGCAACTGTTATGCGGTGGTCACTCTTTTAGCGCCCACAGAGCAGTCCTAGCAAGTGTCAGCAATTTTCTAAGGCGTATCCTGCTAACAAGCCCTGACGAAGCAACCACATTCATCGTTCTACCCGACTTCGATTTAGAAGCAATGTCCTCAGTTTTGTATTACATATACAACGGAGAAGTGGTCCTTCAGAAGAACAAGTTGGGTCTGTTTTTGGAGATCGTTCATGCTATGCAGATTTATATAGACTCTCAATATTTGTCTAAAATATGTGCTAAAATACAGGATATTGAAGAAAAATATGTAGAATTTGCAAAATATTGTGAAAACATTTCCTTGCCCAATCAGATATTCACTCTCGGATTGAATATCGATAATGAGCAaatgtttaatattaaaaaatgtaaagaaaCCCAGAGACCTCTTGTGAAATATTCACAGAGCAACATAGATTTAAACGATTGCAACGTACGAAATCTGAATGAGAGTAAGCCCGACGAGTCTCGTTTAGGCAATCTGAAATCGCCATACGAAGACCGACAAAGGAACACTTTACTACGTGATTTATTTATCGAGGCATATCCTCGAAACGGTAATGTTAACGGTCTGACGGAAAGCGTGCTGGCAATATCAAACGAATGCTATCAGTCTCCGGCATCTGAGCTCTTAGCAAATGCAAATAGCAGACATCTCAACATGGGAGCCGCGCGCGCAGTACGCCCTAAAACAGCATCTTGCCATTCTTTACATTCGGCATCCGTCTCAGGCGACGACAGATTGCAACAGACTTACAACTCCAATTCGAAATGTAGCAAACAAATTGATGCAGCAGATTTACGAGCTAATCGATATCCAACAGATTTTCAAGGGATCATGCGATTTTATAGTGTCAACCAAACGTTTTTGGATGTAGACAGACATGCCTTTGACGATGCAGTTCGAACCACATCAGGCACGGATATCAATAAGTTACTTTTCGATCCAATAATGTGTCGCATAAATACAGAAAACTTTATAAAACAGAGAAATCTGCCAGTAGAGAATGAAAGAGTACATCAAAGAGAAAATACGAAATCAAAAGCTCCTTCAAAAGTTATATTCAATCAAGTCTTGGAAAACCCTTGGAATGCACGAAAGCCTAACAATTATAGACCATTTcggaaaaaagaaaaacacgAAATTTTACTTTCAACAAACAAGGATAACATAATAGAGGCTCAAAATGATACGAATAACAATGTTGAAATACCGCCTGTGTCAGAAGGAGAGTTGGCTGAAAGGGAACTCGAACAACCCCTGCAAGAGTTTTTTATCAGTCCTGCAGTTATTGAAAGCAGGGAATGTTTCAAATGCACCAATTGTGACCAGGTATTCACAACCAGCGAGTCCCTCACTATCCACATGCGTCGCCACTCCTCCAGCGCGCGTTACTCTTGCGGCGAGTGCGGAAAGACGTTCTCTCAGCTGCGAAACTTCAAGTACCACATGTCAATACACAAAGGAACTCGCGAATTCGCAGCGACCTGCACTGTCTGCGGGAAGTATTTCAATGATAGGGGATACTTGAGCAGCCATATGAAGATTCATAGAAATCGCAAGGAATATAAATGCTCACTGTGCCCCAAGTCCTTCAATCAGCGTGTTGCCTACAACATGCATGTGAGGATTCACACAGGAGTAAAACCACACGTTTGCGAAGAATGTGGCAAGGCGTTCTCCCGCAAGATGCTTTTGAAACAGCATCAGCGCACGCACTCGGGTGAGCGCCCGTACGCCTGCCCGCACTGCGATAAGTGCTTCGCCGATCGTTCTAATATGACCCTGCATGTTAGATTGCACACTGGCGTAAAACCATTCTCGTGTCCTATGTGCCCAAAGTCGTTCACAAAGAAGCACCATCTGAAGTCCCATCTAAACTTCCACACGGGATCCAAGCCTTACTCCTGCCCGCGCTGCCACCTTGCCTTTACACAGTCTTCGAACATGAGGACCCATTACAAGAAATGCATCGCAGAGCCAAGTACCAGCGAATCTGTACCTTAG
Protein Sequence: MCEWLSLGEWSDVQLLCGGHSFSAHRAVLASVSNFLRRILLTSPDEATTFIVLPDFDLEAMSSVLYYIYNGEVVLQKNKLGLFLEIVHAMQIYIDSQYLSKICAKIQDIEEKYVEFAKYCENISLPNQIFTLGLNIDNEQMFNIKKCKETQRPLVKYSQSNIDLNDCNVRNLNESKPDESRLGNLKSPYEDRQRNTLLRDLFIEAYPRNGNVNGLTESVLAISNECYQSPASELLANANSRHLNMGAARAVRPKTASCHSLHSASVSGDDRLQQTYNSNSKCSKQIDAADLRANRYPTDFQGIMRFYSVNQTFLDVDRHAFDDAVRTTSGTDINKLLFDPIMCRINTENFIKQRNLPVENERVHQRENTKSKAPSKVIFNQVLENPWNARKPNNYRPFRKKEKHEILLSTNKDNIIEAQNDTNNNVEIPPVSEGELAERELEQPLQEFFISPAVIESRECFKCTNCDQVFTTSESLTIHMRRHSSSARYSCGECGKTFSQLRNFKYHMSIHKGTREFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCSLCPKSFNQRVAYNMHVRIHTGVKPHVCEECGKAFSRKMLLKQHQRTHSGERPYACPHCDKCFADRSNMTLHVRLHTGVKPFSCPMCPKSFTKKHHLKSHLNFHTGSKPYSCPRCHLAFTQSSNMRTHYKKCIAEPSTSESVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698527;
90% Identity: iTF_00706215; iTF_00699407; iTF_00699459;
80% Identity: iTF_00706215;