Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000193.1:238537-242978[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.0049 0.37 12.0 0.1 1 20 115 134 115 136 0.94

2 24 0.028 2.1 9.6 2.3 1 23 166 188 166 188 0.97

3 24 0.0096 0.72 11.1 0.9 2 23 193 215 192 215 0.94

4 24 0.62 46 5.4 5.8 3 21 219 238 218 239 0.89

5 24 9e-05 0.0067 17.5 1.6 1 23 248 271 248 271 0.96

6 24 0.015 1.1 10.5 0.2 2 21 378 397 377 398 0.94

7 24 0.0057 0.42 11.8 3.6 1 23 428 451 428 451 0.96

8 24 0.00091 0.068 14.3 0.4 3 23 458 478 456 478 0.94

9 24 0.93 69 4.9 3.4 1 20 481 500 481 502 0.91

10 24 0.00011 0.0081 17.2 0.4 1 23 514 537 514 537 0.94

11 24 3.5e-05 0.0026 18.8 2.4 1 23 543 565 543 565 0.97

12 24 0.031 2.3 9.5 1.0 5 23 575 593 573 593 0.97

13 24 0.0017 0.13 13.5 0.9 1 23 599 622 599 622 0.98

14 24 0.015 1.1 10.5 0.2 3 23 632 653 631 653 0.96

15 24 0.00018 0.014 16.5 0.3 2 21 765 784 764 785 0.94

16 24 1.6 1.2e+02 4.1 0.0 3 23 792 813 790 813 0.94

17 24 0.07 5.2 8.4 0.0 3 23 820 841 819 841 0.94

18 24 7.9e-05 0.0059 17.7 0.3 3 23 848 868 846 868 0.95

19 24 0.028 2.1 9.7 3.5 2 20 872 890 871 892 0.93

20 24 1.5e-05 0.0011 19.9 0.3 1 23 916 939 916 939 0.95

21 24 0.00069 0.052 14.7 2.2 1 23 945 967 945 967 0.96

22 24 0.043 3.2 9.1 0.2 1 23 973 995 973 995 0.98

23 24 0.025 1.8 9.8 0.1 1 23 1001 1024 1001 1024 0.94

24 24 0.0037 0.28 12.4 0.4 1 23 1030 1053 1030 1053 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.0049	0.37	12.0	0.1	1	20	115	134	115	136	0.94
2	24	0.028	2.1	9.6	2.3	1	23	166	188	166	188	0.97
3	24	0.0096	0.72	11.1	0.9	2	23	193	215	192	215	0.94
4	24	0.62	46	5.4	5.8	3	21	219	238	218	239	0.89
5	24	9e-05	0.0067	17.5	1.6	1	23	248	271	248	271	0.96
6	24	0.015	1.1	10.5	0.2	2	21	378	397	377	398	0.94
7	24	0.0057	0.42	11.8	3.6	1	23	428	451	428	451	0.96
8	24	0.00091	0.068	14.3	0.4	3	23	458	478	456	478	0.94
9	24	0.93	69	4.9	3.4	1	20	481	500	481	502	0.91
10	24	0.00011	0.0081	17.2	0.4	1	23	514	537	514	537	0.94
11	24	3.5e-05	0.0026	18.8	2.4	1	23	543	565	543	565	0.97
12	24	0.031	2.3	9.5	1.0	5	23	575	593	573	593	0.97
13	24	0.0017	0.13	13.5	0.9	1	23	599	622	599	622	0.98
14	24	0.015	1.1	10.5	0.2	3	23	632	653	631	653	0.96
15	24	0.00018	0.014	16.5	0.3	2	21	765	784	764	785	0.94
16	24	1.6	1.2e+02	4.1	0.0	3	23	792	813	790	813	0.94
17	24	0.07	5.2	8.4	0.0	3	23	820	841	819	841	0.94
18	24	7.9e-05	0.0059	17.7	0.3	3	23	848	868	846	868	0.95
19	24	0.028	2.1	9.7	3.5	2	20	872	890	871	892	0.93
20	24	1.5e-05	0.0011	19.9	0.3	1	23	916	939	916	939	0.95
21	24	0.00069	0.052	14.7	2.2	1	23	945	967	945	967	0.96
22	24	0.043	3.2	9.1	0.2	1	23	973	995	973	995	0.98
23	24	0.025	1.8	9.8	0.1	1	23	1001	1024	1001	1024	0.94
24	24	0.0037	0.28	12.4	0.4	1	23	1030	1053	1030	1053	0.96

Sequence Information

Coding Sequence: ATGGAAGATGGCAATTCCCGCAACACTCCACAACAGCTGTGCCATCAATGCGTGTCCGAAATCACCGCGTTCATACCATTCCTGAGACTCTGCAAACAATCCGCTGAACATTGGAGCTTTCTATCTGAGAATTTGATCAACCTTTCTACCCAGAAGACTTTTAACACAGTTTTCATCTTTGTCAACGATAAAATAGATAAAGTAAACACTGTGTTCGAAAGAAGGGATAGAAGCAAGAATAAGTTGTGTAATGTAGTCATAAAGCGGATTAACCAGCTAGAGTCAGCGAAACGGATACAAGAGACCGACGAtgatgaaccaaccaagccgggGAAGTTTCATTACGCTTGCGTAGAGTGCGGTGCGAAGTTTAGCCGGTTGCACAACATTAATAACCACTTAGCGAACCAGAAAAAGCGTTTCTGTCCTCATTGCCACAATATTATCGATCTTAAAGCGTTTGGAGAGCATTTGAAGTCGCATTCAATCCCTTTCTACACCTGCAAGATCTGTTCCTTAGCCTTTGAGTGTAAATACGAATTGATAAAACACAAAAGTGTACATAAAGGTAAAGTCATGTGCGGGGAATGCAAAAACGCCTTTCCCTCAGCACATCACCTAAACATTCACGTCATTAGGAAGCATGAGCGTGCTTGCTGCatcaaatgtaataaaaaattctCGAATCGCATATGTTTTAACAAGCATCAAAGCAAATGCAAGTCTAGGAAGCCTGAGAAGTATATTTGCGATCACTGCTCAAAAGAGTTCAGTGAGAAGGGCAATATTAAGAGGCACATAAATAACATGCATTCAAAGATCTTATCTCATCAGTGCGAGGTCGACGACCACCCCGCGCTCCCGCCGGGGCTCTGCGGCGTCTGCGCAGGCGACGCCATATCCGCTGCCAAATTCAGAAAACTTTCCGATAAGTCCGTAAAATGCTGGAGCGAAGCCGCCCAATACCTATCACAAATAGACAGTGAGAGCAACGACACGAAAACATTGCTTTATGTCTTCGAAGGACACACTTTGATATTCTACAAAAAAAGGGCCAAAACTGTTAAATCTGCGGTCACAGCTCTCggtaatttcgagaaggaattAACGACCAATAAAAAGAGTCCGACCTCATGCCCATTCTGCGATAAACGGGTGATTTCTGTGCAGAATCTTAACCAACATCTTAAAAACAGCTCGAAAAAGATGTGCTTTTGCGGTTGCCTTATGGACAAATCAGAAATCTGTAAACACTTGCGAGAGGCGCACAAAATCAAGGTCTTCCAATGCAGTATCTGTCATGAGCAGTTTCAGAATAATAAGGTTTTAAAGAGGCATAGCATGAGATCCCACGGACCCAAGTCGTTCGGTTGCGAGCATTGTGGACGTGGTTATAGAAACGCGAGGGCCTTGCGGGCCCATTACTACGCCCACACTTTGTTCGACTGCTCCGCTTGCGGGAGAACTTTCGAAAACATCCGCTGTTACCGCCACCACAAAACtacatgtaaaaatatacacaaaaatgTCTTCAGTATATTTGAGTGTAATGACTGCGGAAAGCAATATGACAAGAAAGGATCTCTTAGGATCCATGtgatacaaaaacatttaaatgtCTTACCATACATTTGTCAGATCTGCGGGAAGAAAACTTCTACCTTAAGCCATTTGAAATCACACTCTAAAGTTCACGAGGCAGATAGGAAGACTCTAGAATGCCACTGCGGGGCTAAGTTCCGCACTGAAATAGGGTACCGATTACATATGAGGATACACAGCGGTTTGAGGCCTTTTAAATGTGAGGAGTGCGAGGAGAGTTTTATATCAGCGTCTAGACGCTCCGATCATATGAAGAGACGACATAAGAGTGTGAAAGATATGGCACATGGTTGCGAGCAGTGCTTGGCTCGGTTCATCAGGCCTTGGGAACTGAAGAAGCATTACAAGCTGTCGCATAATTCGATAGTGGATATAAAAGAGGAGACCTTCTGTCCGGGTGGTGTTTGCGTAGCATGCGCAAGCGCAGCGCTGGCTGCGGAAGAATTCCGTCTATTCGTTCGCAACGCCGCCTCACTCTGGCGGCGCGCCATCATCAACCTCTCCCAACTACCCTACGAGGCTAGCGACAACGCCAAGTCCGTTTGCGCGGTCGTTTCCCCCAACATTACTGTCGACACACATAGTGATCTCGACGCTGGCGATGCGACTGAAGTCATTGACAAGTTGCAGTCGAAGTTGATTAAGAAACACGAGAGAAAACCTCGCGTTTTCCGCACCGGGCCAACTGTAACCTGCCCTGATTGCAACAAGCAGTTCTCAGGTCCTCATTTATTGCAAACGCATCTTCAGAACAGTGATAGGAAAGACGCTTGTGGAATTTGCGGCGCGGTTGTTGCTATAGGTGCTGAGTTGAAAAATCACCTGGCAACGGTGCATAGAGAACCCGCTATCCTGTGCAAAGAATGCCCAACCGTTGTGGTCTCAGAAGCTGCGCTCAAAGCACATCGGAGCTTAGCACATAAACCTGGGGCACTAAACTGCGGCGCTTGCGGTAGGACCTTTACCCGCAAAGGGTCCTACGAAAGCCATATCCAAATGCACGTCGTCTTGACCTGCAGACTCTGCGGTACCCAATTCTCTAACAGAAGCTGCTTCCGCCAGCATAGATCCTTTTGCGAACCCAATGCAAAACCTAAATCCATCCCCCGCATACGTCGTTCCAACAACCGCGATCCAGGTCAATACGTGTGCGACTACTGTCAAAAGATGTACAGCTCTAGGCCGCAATTGAAGAACCATATCCTCTGGATCCATTTGGACCACAGGCCGCACCAATGCTCGTTCTGCGGAAAGCGATTCTACACATCAGCGAGGTTGAACGAGCACACCGTTGTCCATACGAGAGTTAGAAACTTCGAGTGTGATCTATGTGACGCGAAACTAGTGTCTAAAAGTGCTGCGATTTACCACAGACGAAGGCATACTGGGGAGAAGCCCTACATCTGCGATGACTGTGGAGCAGCCTTTATTTCCTCATCGAGGAGGTTAGAACACGCGAAACGAAAACACAATAAAGGAATTCGGTTTAAGTGTACAGAGTGCATCGCTAGCTTCGTAAGGAGACGGGAGCTTGAGAAACACGTGGCGAAAAATCATAAAGCCAATGCTAAATGTGAGGTATTCGAAAGTGGTTtcaaagtttaa
Protein Sequence: MEDGNSRNTPQQLCHQCVSEITAFIPFLRLCKQSAEHWSFLSENLINLSTQKTFNTVFIFVNDKIDKVNTVFERRDRSKNKLCNVVIKRINQLESAKRIQETDDDEPTKPGKFHYACVECGAKFSRLHNINNHLANQKKRFCPHCHNIIDLKAFGEHLKSHSIPFYTCKICSLAFECKYELIKHKSVHKGKVMCGECKNAFPSAHHLNIHVIRKHERACCIKCNKKFSNRICFNKHQSKCKSRKPEKYICDHCSKEFSEKGNIKRHINNMHSKILSHQCEVDDHPALPPGLCGVCAGDAISAAKFRKLSDKSVKCWSEAAQYLSQIDSESNDTKTLLYVFEGHTLIFYKKRAKTVKSAVTALGNFEKELTTNKKSPTSCPFCDKRVISVQNLNQHLKNSSKKMCFCGCLMDKSEICKHLREAHKIKVFQCSICHEQFQNNKVLKRHSMRSHGPKSFGCEHCGRGYRNARALRAHYYAHTLFDCSACGRTFENIRCYRHHKTTCKNIHKNVFSIFECNDCGKQYDKKGSLRIHVIQKHLNVLPYICQICGKKTSTLSHLKSHSKVHEADRKTLECHCGAKFRTEIGYRLHMRIHSGLRPFKCEECEESFISASRRSDHMKRRHKSVKDMAHGCEQCLARFIRPWELKKHYKLSHNSIVDIKEETFCPGGVCVACASAALAAEEFRLFVRNAASLWRRAIINLSQLPYEASDNAKSVCAVVSPNITVDTHSDLDAGDATEVIDKLQSKLIKKHERKPRVFRTGPTVTCPDCNKQFSGPHLLQTHLQNSDRKDACGICGAVVAIGAELKNHLATVHREPAILCKECPTVVVSEAALKAHRSLAHKPGALNCGACGRTFTRKGSYESHIQMHVVLTCRLCGTQFSNRSCFRQHRSFCEPNAKPKSIPRIRRSNNRDPGQYVCDYCQKMYSSRPQLKNHILWIHLDHRPHQCSFCGKRFYTSARLNEHTVVHTRVRNFECDLCDAKLVSKSAAIYHRRRHTGEKPYICDDCGAAFISSSRRLEHAKRKHNKGIRFKCTECIASFVRRRELEKHVAKNHKANAKCEVFESGFKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704256;
90% Identity: -
80% Identity: -