Basic Information

Insect: Eupithecia vulgata
Gene Symbol: -
Assembly: GCA_946478135.1
Location: CAMLCK010000147.1:479141-483902[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.5e-06 0.00011 23.1 3.4 1 23 179 201 179 201 0.99

2 16 0.07 5.2 8.4 2.9 1 23 207 229 207 229 0.96

3 16 6.8e-06 0.00051 21.0 0.3 2 23 235 257 235 257 0.95

4 16 1.2e-06 8.9e-05 23.4 0.3 2 23 264 285 263 285 0.97

5 16 3.8e-07 2.8e-05 25.0 2.5 2 23 292 313 291 313 0.96

6 16 0.00073 0.055 14.6 3.1 1 23 319 341 319 341 0.97

7 16 2.2e-05 0.0016 19.4 3.3 1 23 347 369 347 369 0.96

8 16 2.9e-05 0.0022 19.0 0.2 1 23 375 397 375 397 0.99

9 16 4.5e-06 0.00034 21.6 3.8 1 23 403 425 403 425 0.97

10 16 7.2e-08 5.4e-06 27.2 1.7 1 23 431 453 431 453 0.99

11 16 3e-07 2.2e-05 25.3 1.1 1 23 459 481 459 481 0.99

12 16 4.1e-06 0.00031 21.7 0.7 1 23 487 509 487 509 0.98

13 16 1.4e-06 0.00011 23.2 0.5 1 23 515 537 515 537 0.98

14 16 2.8e-06 0.00021 22.2 3.0 1 23 543 565 543 565 0.98

15 16 3.1e-06 0.00023 22.1 1.2 1 23 571 594 571 594 0.97

16 16 3e-06 0.00023 22.1 0.9 1 23 600 622 600 622 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.5e-06	0.00011	23.1	3.4	1	23	179	201	179	201	0.99
2	16	0.07	5.2	8.4	2.9	1	23	207	229	207	229	0.96
3	16	6.8e-06	0.00051	21.0	0.3	2	23	235	257	235	257	0.95
4	16	1.2e-06	8.9e-05	23.4	0.3	2	23	264	285	263	285	0.97
5	16	3.8e-07	2.8e-05	25.0	2.5	2	23	292	313	291	313	0.96
6	16	0.00073	0.055	14.6	3.1	1	23	319	341	319	341	0.97
7	16	2.2e-05	0.0016	19.4	3.3	1	23	347	369	347	369	0.96
8	16	2.9e-05	0.0022	19.0	0.2	1	23	375	397	375	397	0.99
9	16	4.5e-06	0.00034	21.6	3.8	1	23	403	425	403	425	0.97
10	16	7.2e-08	5.4e-06	27.2	1.7	1	23	431	453	431	453	0.99
11	16	3e-07	2.2e-05	25.3	1.1	1	23	459	481	459	481	0.99
12	16	4.1e-06	0.00031	21.7	0.7	1	23	487	509	487	509	0.98
13	16	1.4e-06	0.00011	23.2	0.5	1	23	515	537	515	537	0.98
14	16	2.8e-06	0.00021	22.2	3.0	1	23	543	565	543	565	0.98
15	16	3.1e-06	0.00023	22.1	1.2	1	23	571	594	571	594	0.97
16	16	3e-06	0.00023	22.1	0.9	1	23	600	622	600	622	0.98

Sequence Information

Coding Sequence: ATGTACTTTATAGAAAACGAATATCCCCAAGAAGTTTACCAGAGGTTTACTGGAAGTTTGCTTATGGCAGGAGACAACAGACCCAGCACGGTGTGCTACATGTGCAACGCACAGTTACTAAGATGCTGGAGGTTCTATAACATGTGCCAGAAGTCGGAAAAAATTTGCACAGACCTGTATCAGAACAATCTAGAGGTGACACAGGAGAGTCTAGCTAAGCACAACCTTGGTTGGATTTACAACTTGTCTACAACACCAGTGAAATTTGTATCTTATGTTGAAGAGACAGAAATCTCTGTTAAAGAAGAAGACACTTCAGATGATGAAGTTCTGATGCCTATGTTTGTTGAGGAAATCAAAAGTGAATGCAATGTGCTTATCAGTAATGAAGCAATTGATGATAAATCTATGACTACAAGCATACATGATACCTCAAATGGAAATTGTAATGAAAGTGACATTAATAGTAGACAAAGAGACAAATcaaaatctaaaatgaaacgTGAAAGCCGTAGAGGAAATGTAGCTACAATATTTAAGTGTGATGTTTGTAAAAAGCCGTTTACTAAAAGTTTGTACTTGAAAAGGCACATGAGAAAACACACTGAGGAAAATCCATATTCTTGCAAAATATGCACTGAGAGATTTAGTTGCATGGATTCATTAAAAACTCATAATCTTGTACATACAGCAGAGATGCCGACCTGTGATGTCTGTGGCAAAACATTTGCCACAAAAACTGTTCTCAATAGACATATTATGCAAGTACACTCTGGACAAAAACCAATGGAATGTAAAGTTTGCAATAAATCATTTCCAGTCAGAGATAGTCTACGGGCGCATATGAAAATTCACGTTGGATACAAGCCATGTGTCTGCAATATCTGTGGGAAAACCTTTTTTGACAAAAGTCAACTGAAAGTCCACACTAGAATACATTCTGGAGAAAAGCCTTTTACATGTGACTTGTGCAACAAGTCATTTACTCAATTAACTATATTAAAAAGTCATATGCACCTTCACACTGGAGAGAAGCCTTATGTTTGTAAAATATGCAATAAGTCATTTCGACATCGTTCCACTTTGGCCTATCACTCACAACTCCATACTGGAGGAAAGCCATATACATGTCCTATATGCAACAGTGTCTTTGATCTGAAACCTCTTTTACGCAAGCACATGGCCACTCACACCGACAACACCTCCCATGTTTGCAAAATTTGTAACAAAGCCTTTATCCAAAGTGTTTGTCTTAGGAAGCACATGAAAATTCACACAGAGGAGAGGCGATATACTTGCAATGTGTGTGGCAAATCCTTCTTCAGAAGTACTGGATTAAACAATCACATGAAAACGCACACCGGAGAAAAACCATATACATGCAATGTGTGTGGAAAATCATTCTCTCTTAATTCAACTTTAGTGAAACACAAGAGAATACACACGGGTGAGAGACCATACTCCTGTGACGTGTGCAATAAGAAATTCAGGCTCAGCGGTGCTTTGAGTAGACACATCAAAAtgcacactggagaaaagccattCACCTGCAACATTTGCAGCAAGTCATTCATTGGCAGTGGAGAattgaaaaaacatttaaaagtaCACAGTGAAGAAAAACCATATACTTGCTACACTTGTACGAAATCATTCAGAGATAAAAAGTCCTTAAAAATTCATATTAGATTACACACTGGAGAAAAACCATACTCTTGCAGTGTCTGTTCTAAATCATTTACCCAAAGTAGTAGTTTGAGTATGCATGTGAAGAGAGTGCACAGTGAAGAGAAACCTTACAGCTGCACTGTTTGTGGGAAATCCTTTTCACTTAATTATATTTTGACCAaacacatgagaattcacactaaAGAGGAGCCACAATAG
Protein Sequence: MYFIENEYPQEVYQRFTGSLLMAGDNRPSTVCYMCNAQLLRCWRFYNMCQKSEKICTDLYQNNLEVTQESLAKHNLGWIYNLSTTPVKFVSYVEETEISVKEEDTSDDEVLMPMFVEEIKSECNVLISNEAIDDKSMTTSIHDTSNGNCNESDINSRQRDKSKSKMKRESRRGNVATIFKCDVCKKPFTKSLYLKRHMRKHTEENPYSCKICTERFSCMDSLKTHNLVHTAEMPTCDVCGKTFATKTVLNRHIMQVHSGQKPMECKVCNKSFPVRDSLRAHMKIHVGYKPCVCNICGKTFFDKSQLKVHTRIHSGEKPFTCDLCNKSFTQLTILKSHMHLHTGEKPYVCKICNKSFRHRSTLAYHSQLHTGGKPYTCPICNSVFDLKPLLRKHMATHTDNTSHVCKICNKAFIQSVCLRKHMKIHTEERRYTCNVCGKSFFRSTGLNNHMKTHTGEKPYTCNVCGKSFSLNSTLVKHKRIHTGERPYSCDVCNKKFRLSGALSRHIKMHTGEKPFTCNICSKSFIGSGELKKHLKVHSEEKPYTCYTCTKSFRDKKSLKIHIRLHTGEKPYSCSVCSKSFTQSSSLSMHVKRVHSEEKPYSCTVCGKSFSLNYILTKHMRIHTKEEPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705647;
90% Identity: iTF_00696641;
80% Identity: iTF_00706605;