Evul022910.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- -
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000143.1:10348-16359[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-07 8.4e-05 22.9 0.0 2 38 103 139 102 143 0.87 2 2 4.6 2.9e+03 -1.3 0.0 13 28 783 802 779 807 0.76
Sequence Information
- Coding Sequence
- ATGGCGCTACAAGTGGGCCCGGCCAGCTTCAGTGCGCACGGACACCTGCACCAGACCTCCAACGAGGCCGAGAGCTTCCACGCGACCTCACGCCGGTCTCTCGGCCCTTCTCCCAATATTTGGAGATACACAGGTGGGCCCGGCCAGCTTCAGTGCGCACGGACACCTGCACCAGACCTCCAACGTGGCCGAAAACTTACAAGCGACCTCACGCCGGTCTCTCAGCCCTTCTACCAATGTTTAGAGATACACAGAATGGGTCGTGTATTAAAAAAAGGAGCACCTAGAAAAATAGGGGCCACTTCTCaagaagaaatgaaaaaagcCGTGCACCTGCACATCAAGAATGGAGTGAGTATTCGAAAAGCATCGAGAGATTGCAAGATACCCTACCCCACTTTACGTAGATacgtaaaaaagtatttacagGATAGCTCAGCAGTTTTAGAGCCAAATTATACggtaaataaagtatttacatctGAGCAAGAAGATTCCCTGCACGAGTATATTGTGGAttgttcaaataaattttatggaCTATCTACCAAAGACTGCCGCCGACTAGCTTACGAGATGGCAGAAATCAACAATATTTCTATGCCTTCATTATGGGTAACGAACAAAATGGCTGGCAAGGATTGGTTGCTAAGTTTTCGAAGGAGACATCCCGATCTCTCGTTAAAGAAACCAGAAGCCTGCAGTGTGGCGAGAGCAACTGCTTTTAATCCTATGAATGTGAAAAAGTTTTATGACAACCTCAAGGATGTGCTTCAGCGTGATGCAAGTTTTGCAGATGGATCCAGGGTGTACAACTTAGATGAAACATCAACAACAACCGTTCAACGCCCTGGAAAGATATTGACACTCAAAGGGCGAACTGCATGTAAAGTAACAAGCGGGGAACGAGGAGTGCTTGTCACAACTTGCTGCATCGTTAATGCGATTGGGCAAGCTCTGCCTCCTGTAATGGTTTTTCCTAGAAAAAACTTTAAGGAACATATGTTGTACGGCGCACCCCCTGGTACACTGGGCGTTGCTGCACCTTCAGGATGGATGAATGGAGAACTATTTGTGCAAGTTATGGCTCACTTCATCAAACATACTGCAGCGTCAAAGGACCACCCGGCATTACTGATTATGGATAATCATGAAAGCCATTTATCCTTGCAAGCACTTAACCTAGCAAAGGCATCGGGAGTAACAATTCTAACGCTCCACCCACATACAACTGCAAAAATGCAACCCTTAGATGTAGGTTTGCTGGCGCCCTTCAAGGCCTATTATAATGGTGCTGTTGATTCGTGGCTACTGCGGAATCCAGGGAGGCCCATGACTATTTATAATATCGCAGAATGCGTGGGTCCTGCATACATGAAGTCAATGACCCCAATAAATATAGTCAACGCATTTAAAAAATGTGGAATATTTCCATATGACGACCAATTATTTACTGATGCTGATTTCCTGCCAAGCACTGTGACTGATAGACCACAACCAACAATTGAAATTGAGGAAGAATCAGACGTGACAGATGCAGAAGATGTTGCTGAGCATCATGAAAATTCGATGAATTGTAATAAGACCTGTGCCTCACCATCTCTTTTGGATGAAAACACGGCTCCTCTCATAGAAAATGATACGAGAGCAGTAGTTAATTTGATGGAAGATCACAGACAATCTAGCACTTCTGCTGAACCAACCACTGCTTCAAAAGCAGTTGAACTGGTTGAAGATCATGCGCAACCAAGTACTTCTAGAGCTGCAGCAAACTTTATATCTCCTAAAGTATTTTGCAAACCCCTGAAAGCAAAACCTCGAAAAACAATACGGAAAGCAGGAAGAAGCCTCATAGCAACTGACACGCCCGAAAAGGATGCCTTAGCTGCAttgaaaaacatcaaaaataagggaatgaaaagaaaaaatactcaaGCAAAAAAAGTGAAGCAAGACTTATTCAATAAAGCTAAAAATGTACGAAGAAGTGAAAGGTCTGCTGTGGCTTCAGATTCATCCGATGATGAGCAGGCAGTATTCGAACCAAGCGGGTCATCGTCGGGTGGAGAACAATTTTGGAGCGAtgcagaagaagaagaagttatTTTGAATGACGATTTTCCACCATTGACTAAAGAGCCTGTGCCTAATGATTATGTAATTATCCTATTCAAATCCAAAAACATTAATGTTTACTACGTGGCCAAAATTTTGGAGAaactagatgatgatgattgtgacTATTATGTGTCGTATCTGAAGCTTAAGAGCAAAGCTAATCAAAAGTTTGTCGAGCCAATAATTCCTGACACAGCAGGAGTAGCCATGtcagaaattaaatatgttttgcCTGCTCCTAAAGTGGAAGGTACTAGTCGCCGACAAGCTACTTTAAAATTTGACGTTGACATGTCACTTCTAAATTTACGGTTTTAG
- Protein Sequence
- MALQVGPASFSAHGHLHQTSNEAESFHATSRRSLGPSPNIWRYTGGPGQLQCARTPAPDLQRGRKLTSDLTPVSQPFYQCLEIHRMGRVLKKGAPRKIGATSQEEMKKAVHLHIKNGVSIRKASRDCKIPYPTLRRYVKKYLQDSSAVLEPNYTVNKVFTSEQEDSLHEYIVDCSNKFYGLSTKDCRRLAYEMAEINNISMPSLWVTNKMAGKDWLLSFRRRHPDLSLKKPEACSVARATAFNPMNVKKFYDNLKDVLQRDASFADGSRVYNLDETSTTTVQRPGKILTLKGRTACKVTSGERGVLVTTCCIVNAIGQALPPVMVFPRKNFKEHMLYGAPPGTLGVAAPSGWMNGELFVQVMAHFIKHTAASKDHPALLIMDNHESHLSLQALNLAKASGVTILTLHPHTTAKMQPLDVGLLAPFKAYYNGAVDSWLLRNPGRPMTIYNIAECVGPAYMKSMTPINIVNAFKKCGIFPYDDQLFTDADFLPSTVTDRPQPTIEIEEESDVTDAEDVAEHHENSMNCNKTCASPSLLDENTAPLIENDTRAVVNLMEDHRQSSTSAEPTTASKAVELVEDHAQPSTSRAAANFISPKVFCKPLKAKPRKTIRKAGRSLIATDTPEKDALAALKNIKNKGMKRKNTQAKKVKQDLFNKAKNVRRSERSAVASDSSDDEQAVFEPSGSSSGGEQFWSDAEEEEVILNDDFPPLTKEPVPNDYVIILFKSKNINVYYVAKILEKLDDDDCDYYVSYLKLKSKANQKFVEPIIPDTAGVAMSEIKYVLPAPKVEGTSRRQATLKFDVDMSLLNLRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377051;
- 90% Identity
- iTF_01529130;
- 80% Identity
- -