Evul002654.1
Basic Information
- Insect
- Eupithecia vulgata
- Gene Symbol
- POGK_1
- Assembly
- GCA_946478135.1
- Location
- CAMLCK010000009.1:4565134-4568316[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.1e-09 1.4e-06 28.6 0.0 1 35 14 48 14 56 0.91 2 3 4.7 3e+03 -1.3 0.0 25 37 762 774 761 777 0.86 3 3 4.7 3e+03 -1.3 0.0 25 37 966 978 965 981 0.86
Sequence Information
- Coding Sequence
- ATGCCCCGTACGTACGTTCGTTTGAAAACAAAACCATACACGCCAGAAGACTTAGCTGAGgcgttacaaaaaataaaaaatggagaACTTACCATAACCACTGCAGCAGAACAATACTCCATTCCAAAAGCGACTCTAAGCGATAATCTGCATTCTAAGTATTCCAGGCCAACTGCAGGTAGACCAACAATCTTTTCATTGGAAGAAGAACGTTTAGCAGATGCTATTAGAGTAATGGAAAAATGGGGATTTGGAGTGTCCAGACAAGAAATTTTGGAAATTGTCGCTGAATACGTAAAGGAAAATCAGATTAAAACGCCATTTAAAAATAACACGCCTGGTCCTGATTGGTTCATCAACTTTCGCAAACGTCACCGCCTCTCTGTAAAGAAAGCACAGCCCGTGGAATACGTGCGTAAAAAAATGACGGATCCATTTTTCATCTTCGAGTACTTTGAGTTGCTAGAACAGACATTGACAGAGTTGGATCTTATTGACAAACCTCAAAAGATCTGGAATCTTGATGAAACGTCTCTGTGCCTGGACCCTACTAGAACAAAAGTAGTTGGCGCCATCAACAAACCCTGCGCAAGAACCACTTACGGTTCTGGCAAGGAAAATATAACAGTATTGGCAGGTGCAAATGCTGCAGGCAAGAAATTACCGCCTTTAGTTATATTTAAAGGAACATATGTTTGGGATCAGTGGATGGCTGAAACAGATGATTACGACTTTGAGTTATCGTATGCTGCAAGTCCTAAGGGGTGGATGCAGACCGATATATTCTATAATTACATAAAGAGGATTCTCATTCCAAGTCTAGGTCAGGAGAGACCAGTCTTGTTAGTGTATGACGGCCATTCCACCCACGTCGATGTTAAAGTTATAGAATTGGCAATTGAAAATGATATAACCATTCTCAAACTCCCCCCACACACATCTCATTTTCTTCAACCGCTTGATATAGCAGTTTTCAAATCCTTCAAGAGCAAGTGGGATGCCAAACTAGTCGACTGGCAGCGTCGAAACACGGGCACTAAAATGGCAAAAAAGATATTCTCGAAAACACTTGCTGATACATGGCAAGAAACCAAACCCGACATAATTAAAAATGGGTTTAAAAAAGCTGGAATTTGTCCATTTGATGCCAATGTTATACCTGTGGAGAAGTACGATCCAAATGCCTATAGAAGGTACCAGATAATAAGAAAAGAGCGTTTGGCCCAAAGTCAACAAAACGCAAGTAGTCCCGaatcattgaaaaaaatatgtatcgaTTATTTTAATCAACAGAATATCATACCTCACGAAACACTTCAAAAACAGTGCCCATCGGACCAACAGGACGAAACTCTTGAAAAACCAAAGTCTATTCCAACTGGAAATTTAACCTTACTatctgaaatttcaaaatctgATAGCCAGATGACGGCTTTTTTAGCTAAAGATTCAAATTCTTTGCCAACATGTTTAAAAAAAGGTCGTTCTGACCAACGAAACAACGTTACAGATAAACCTCCTAAATTCACATCTAACATTGTCATCAAAGAACCTTCAGTTGCTTTCAATGCAGCGCCAGGACCACACCTTTCACCAGCATCTCCAAAAATTTTCACATTTGAAGAAGCTTTTCTGAAAAAGATACAACAGGACAAGAAAAACAATGATACTGtggtgaaaaaaaaacgtatcTCAAAAGGTGCCGAGGTTATAACCAAGTCTATGAGTAAGAAAGAAGAATCTAAAGACGAAGATAAAGTAACTAAGAAAAGTATGAAGAAGCAAAATAACAAGGATAGTCAGAGCAAAAATTCTAAAGCAAAAATCGGACAAACAGTGGATAAAAATCGACCGAGCACCTCAGGCCTTCAAAAGAGAACGAAGCGAAAGCGAGTTCCTTCAATGGACTCCACAACAAGTATATCGGATTTAATGAGCCTGTATAGTGACTCAGAAAATCTTGATTTGGATGACTTggaagatttttattttaaagaagaTTTTACCTTACCAAATCTAGACAGTAAACGAAGAAAGGAAGAATTACATAACATCAGTATAAAGGGAAAAGGTAAAGgcaaaaaaagtattaaagaaaaacataccaaggaaaatgaaaatgaaagtgACAGCTCTATGAGTAAACAATCTGGAAGTTACGAAAAAGACTTGACCAatgccaaaaaaataaaaaaggaaaaaggcGAACGATATCAAGAAAGCGAAACCAAAGAAGACACACGTGATAACAACGAAAATGACTACAAAGATGAAAGGAatgacatttttaatataaacgaTACGGTTCTAGTcagatattttatgaaaaacaaatGGGTCTACTATATAGGctttattgaaaatattgacCAGCTGGATGCAGAAACTTACTACActattaatttcttaaaaattgtAAAGAAACCATTCCTAGTATTTGTAACACCAAAAACGAGAGATTGCGACGTAATTCCGAAAGCATCAATAGTGAAGATAGTTAAAATTGAatggaaaaatgagaataaaaaagaatattGCTTGTGTGATGACGTTGACGCTGTGTATTTTGAAGACTTGGAAGAATCTAAAGTATTGAACGAAgattttactttacaaaatctagataataaacaaagaaacgaaGAATCTCATAATATCAGTATAAGAAAGGCTAaaggtaaaggaaaaaaaagtagtAAAGACAAAGAAAACCAaaacaaagaagaagaaaatgaaAGTGACAGCTTTATGAGAAAACCATCTGGAACTGATGTAAAATACTTGAACcgttcaaaaaaaataaaaaaggaaaacGGTGAACGATATCAAGAAAGCGAAACCAAAGACGACACACGTGATAACAACGAAAATGATTACAAAGATGAAAGGAatgacatttttaatataaacgaTACGGTTCTAGTcagatattttatgaaaaacaaatGGGTCTACTATATAGGCTTTATTGAAAAAATCCACCAGTTGGAAGAAGAAACTAGCTTTACTATTGATTTCTTAAAAACTGTAAAGAAACCATTCCTGATATTTGTACCACCAAAAAGGAAAGACATTGACGTAGTTCCGGAGGCATCAATAGTAAAGacaattaaaattcaattaaataatgataataaaaaagaatattgCTTGTGTGATGACGTTGACGCTGTGTATTTTTAG
- Protein Sequence
- MPRTYVRLKTKPYTPEDLAEALQKIKNGELTITTAAEQYSIPKATLSDNLHSKYSRPTAGRPTIFSLEEERLADAIRVMEKWGFGVSRQEILEIVAEYVKENQIKTPFKNNTPGPDWFINFRKRHRLSVKKAQPVEYVRKKMTDPFFIFEYFELLEQTLTELDLIDKPQKIWNLDETSLCLDPTRTKVVGAINKPCARTTYGSGKENITVLAGANAAGKKLPPLVIFKGTYVWDQWMAETDDYDFELSYAASPKGWMQTDIFYNYIKRILIPSLGQERPVLLVYDGHSTHVDVKVIELAIENDITILKLPPHTSHFLQPLDIAVFKSFKSKWDAKLVDWQRRNTGTKMAKKIFSKTLADTWQETKPDIIKNGFKKAGICPFDANVIPVEKYDPNAYRRYQIIRKERLAQSQQNASSPESLKKICIDYFNQQNIIPHETLQKQCPSDQQDETLEKPKSIPTGNLTLLSEISKSDSQMTAFLAKDSNSLPTCLKKGRSDQRNNVTDKPPKFTSNIVIKEPSVAFNAAPGPHLSPASPKIFTFEEAFLKKIQQDKKNNDTVVKKKRISKGAEVITKSMSKKEESKDEDKVTKKSMKKQNNKDSQSKNSKAKIGQTVDKNRPSTSGLQKRTKRKRVPSMDSTTSISDLMSLYSDSENLDLDDLEDFYFKEDFTLPNLDSKRRKEELHNISIKGKGKGKKSIKEKHTKENENESDSSMSKQSGSYEKDLTNAKKIKKEKGERYQESETKEDTRDNNENDYKDERNDIFNINDTVLVRYFMKNKWVYYIGFIENIDQLDAETYYTINFLKIVKKPFLVFVTPKTRDCDVIPKASIVKIVKIEWKNENKKEYCLCDDVDAVYFEDLEESKVLNEDFTLQNLDNKQRNEESHNISIRKAKGKGKKSSKDKENQNKEEENESDSFMRKPSGTDVKYLNRSKKIKKENGERYQESETKDDTRDNNENDYKDERNDIFNINDTVLVRYFMKNKWVYYIGFIEKIHQLEEETSFTIDFLKTVKKPFLIFVPPKRKDIDVVPEASIVKTIKIQLNNDNKKEYCLCDDVDAVYF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01076362;
- 90% Identity
- -
- 80% Identity
- -