Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041615.1:763478-766369[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.8 3.2e+04 -4.0 0.1 26 32 46 52 38 54 0.63

2 11 0.13 1.1e+03 0.7 0.0 14 44 182 212 177 216 0.88

3 11 0.016 1.4e+02 3.6 0.2 21 50 217 246 209 251 0.85

4 11 0.025 2.1e+02 3.0 0.1 24 52 276 304 264 306 0.77

5 11 1.9e-05 0.16 13.0 0.1 13 52 320 360 315 362 0.83

6 11 0.24 2.1e+03 -0.1 0.0 21 43 357 379 355 385 0.80

7 11 0.00066 5.6 8.1 0.2 21 42 385 406 382 412 0.76

8 11 0.61 5.2e+03 -1.4 0.0 26 46 418 438 413 442 0.84

9 11 0.04 3.4e+02 2.3 0.1 21 44 469 492 465 500 0.79

10 11 0.039 3.4e+02 2.4 0.0 21 48 497 524 490 528 0.83

11 11 0.001 8.9 7.4 0.0 21 47 525 551 522 556 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.8	3.2e+04	-4.0	0.1	26	32	46	52	38	54	0.63
2	11	0.13	1.1e+03	0.7	0.0	14	44	182	212	177	216	0.88
3	11	0.016	1.4e+02	3.6	0.2	21	50	217	246	209	251	0.85
4	11	0.025	2.1e+02	3.0	0.1	24	52	276	304	264	306	0.77
5	11	1.9e-05	0.16	13.0	0.1	13	52	320	360	315	362	0.83
6	11	0.24	2.1e+03	-0.1	0.0	21	43	357	379	355	385	0.80
7	11	0.00066	5.6	8.1	0.2	21	42	385	406	382	412	0.76
8	11	0.61	5.2e+03	-1.4	0.0	26	46	418	438	413	442	0.84
9	11	0.04	3.4e+02	2.3	0.1	21	44	469	492	465	500	0.79
10	11	0.039	3.4e+02	2.4	0.0	21	48	497	524	490	528	0.83
11	11	0.001	8.9	7.4	0.0	21	47	525	551	522	556	0.85

Sequence Information

Coding Sequence: ATGCCGATAACAGTATGCAGAATTTGTTTGTGTAGTAGTGATTTGTTGTTTCAAATACCAAACAAATATCCACCAGAGGTTTTTCAGAGACTAACTGGATCTTTGCTCGTCTCTGAAGATAACAGACCCACTAAAGTGTGTTACATATGTAAAGCACAGTTGGAGAGATTTATGAAGTTCTTCAATATGTGCCAGAAATCAGAGAAAATATGCAGAGATCTTTTCCAGAATAATGTAGAGGTAACACAGGAGAGCTTTGTTGAGCTTAACTTGAGATGGTTTTACAACTTGTCAATATCACCACTGAAATTGGTGTCCTATGATAATGCAATAGACATCTCCATCAAACAGGAAGAAGTTTTAATTAATCAAGCATTAGTCCCCATGGTGGATTTCAAAATCAAAAGTGAATGCAACATGTCAGACAGTGAAGTAGAAACTTGTGTTGAACAGTGTGCAGCAACATGCTTATTTGATctttcaaatgaaaaaactgcaaaaacagataataataaaacaagaaatagaagaaaaactaaaataaagccaGACAGCATTCACAATGTAGAGAAGTCGTATAAATGTGATGTTTGTAACAAGTCATATAAGAATAATTTCACTTTCAAAAGACATATGAGACAACACACTGGAGAATTGCCATATGCATGCAAGATATGCACTGAAACATTCAAACAAGTGGAGTTGTTGAATGCTCACATGCTTTCAAATCATTCTGCAGAAAGTCCCACCTGTAATACATGCGCTAAAAGTTTTTCTACAAAAACTCTTCTCGATAGACACATTAGGCAAACCCACCAACAAAGCTCATTAACATGCAAAGTTTGTAATAAAACattcaatataaaacaaaatttaaacgCACACATGAAGATACATGTTGGATACAAGCCATTTGTTTGCACTGTTTGTGGTAAAACCTTTATAGAAAGTGGTCAGTTAAAAGTCCACTCAAGAATACATTCTGGTAAAAAACCATTCACCTGTGAGTTGTGTAACAAGTCATTTAGACAATCAAGTGTATTGCAAAGTCATATGTATCTTCACACAGGAGAAAAGCCATATAATTGCAATGTGTGCAGCAAGTCATTCCGGCACCGGACCACACTCGCTCTACACACTGTGCTCCATGCCGGCGAGAAGCCTTACACATGTCCTATATGTAAGAGCATCTTTGATCTTAAGCCTCTTCTACACAAACATATTGCAACCCACACCGACAACTCCtcatatgtgtgcaaaatttgcAGCAAAGTATTTGTTCATAATATTCTTTTGAAGCAACATATGAAAATTCACATGGATCCGAGAAGTTTTACTTGCGATATGTGTGGTAGATCCTTCTATAAGAACTCGGCTTTAGTGAATCACATGACAACACACACTGGAGAGAAACCATTTACATGTGATGTATGTGAGAAGTCATTTCCTCATAAGAGAACTTTAGTGGCCCACAGAAGGATACACACGGGTGAGAAGCCATACTCGTGCGATGTATGCAATAAGAAGTTTACTTTCAACCATGGCCTGAACAGACATTTTAAGATACACACTGGAGAAAAACCATTTAGCTGCAGCATCTGCAACATGTCATTCATTGGAGGTGATAAATTGAGAAGACATTTGATAGTACATAGTAAAGAAAAACCTTAG
Protein Sequence: MPITVCRICLCSSDLLFQIPNKYPPEVFQRLTGSLLVSEDNRPTKVCYICKAQLERFMKFFNMCQKSEKICRDLFQNNVEVTQESFVELNLRWFYNLSISPLKLVSYDNAIDISIKQEEVLINQALVPMVDFKIKSECNMSDSEVETCVEQCAATCLFDLSNEKTAKTDNNKTRNRRKTKIKPDSIHNVEKSYKCDVCNKSYKNNFTFKRHMRQHTGELPYACKICTETFKQVELLNAHMLSNHSAESPTCNTCAKSFSTKTLLDRHIRQTHQQSSLTCKVCNKTFNIKQNLNAHMKIHVGYKPFVCTVCGKTFIESGQLKVHSRIHSGKKPFTCELCNKSFRQSSVLQSHMYLHTGEKPYNCNVCSKSFRHRTTLALHTVLHAGEKPYTCPICKSIFDLKPLLHKHIATHTDNSSYVCKICSKVFVHNILLKQHMKIHMDPRSFTCDMCGRSFYKNSALVNHMTTHTGEKPFTCDVCEKSFPHKRTLVAHRRIHTGEKPYSCDVCNKKFTFNHGLNRHFKIHTGEKPFSCSICNMSFIGGDKLRRHLIVHSKEKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705289;
90% Identity: iTF_00705289;
80% Identity: iTF_00705289;