Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041629.1:2929595-2932081[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.051 4.3 8.9 0.1 2 23 2 24 1 24 0.94

2 17 0.43 37 5.9 0.2 2 23 49 71 48 71 0.96

3 17 0.022 1.9 10.0 1.0 2 23 94 115 93 115 0.94

4 17 1.1e-07 9.3e-06 26.7 0.6 2 23 120 142 119 142 0.96

5 17 0.23 20 6.8 2.3 1 21 148 168 148 169 0.94

6 17 0.8 68 5.1 0.1 1 12 176 187 176 199 0.87

7 17 0.00012 0.01 17.1 0.7 1 23 206 229 206 229 0.96

8 17 0.014 1.2 10.7 0.1 2 20 274 292 273 294 0.94

9 17 0.02 1.7 10.2 0.1 2 20 324 342 323 343 0.93

10 17 0.00078 0.067 14.6 2.9 1 23 368 390 368 390 0.97

11 17 0.0096 0.81 11.2 0.0 1 23 394 417 394 417 0.96

12 17 0.17 15 7.2 0.3 2 20 423 441 422 443 0.92

13 17 2.3 1.9e+02 3.7 1.6 1 23 450 473 450 473 0.85

14 17 4.5e-06 0.00039 21.6 1.2 1 23 480 503 480 503 0.98

15 17 0.00019 0.016 16.5 1.9 1 23 507 529 507 529 0.98

16 17 1.7e-05 0.0014 19.8 1.6 1 20 535 554 535 557 0.95

17 17 0.0024 0.2 13.1 1.0 1 23 563 586 563 586 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.051	4.3	8.9	0.1	2	23	2	24	1	24	0.94
2	17	0.43	37	5.9	0.2	2	23	49	71	48	71	0.96
3	17	0.022	1.9	10.0	1.0	2	23	94	115	93	115	0.94
4	17	1.1e-07	9.3e-06	26.7	0.6	2	23	120	142	119	142	0.96
5	17	0.23	20	6.8	2.3	1	21	148	168	148	169	0.94
6	17	0.8	68	5.1	0.1	1	12	176	187	176	199	0.87
7	17	0.00012	0.01	17.1	0.7	1	23	206	229	206	229	0.96
8	17	0.014	1.2	10.7	0.1	2	20	274	292	273	294	0.94
9	17	0.02	1.7	10.2	0.1	2	20	324	342	323	343	0.93
10	17	0.00078	0.067	14.6	2.9	1	23	368	390	368	390	0.97
11	17	0.0096	0.81	11.2	0.0	1	23	394	417	394	417	0.96
12	17	0.17	15	7.2	0.3	2	20	423	441	422	443	0.92
13	17	2.3	1.9e+02	3.7	1.6	1	23	450	473	450	473	0.85
14	17	4.5e-06	0.00039	21.6	1.2	1	23	480	503	480	503	0.98
15	17	0.00019	0.016	16.5	1.9	1	23	507	529	507	529	0.98
16	17	1.7e-05	0.0014	19.8	1.6	1	20	535	554	535	557	0.95
17	17	0.0024	0.2	13.1	1.0	1	23	563	586	563	586	0.96

Sequence Information

Coding Sequence: ATGGTCTGTGTTTTCTGCTTTGAGAGTTACGAGGATTCGTCAGTGTTCAGAAACCATATGGATATAGAGCACAAGACGTTCTCTGTCCCTTTAGCCTTCGCGCATTGCTCAGAAGGCTTCGTAAAAGCCGACTGCACCGACATTCGATGCCGAATGTGCAGCGAACCCTGTGCTAATCTAGACGAAGCGgctgtacatttaaaaaaagttcaCCAAAAAGCTGTCGATATTTCAGCTCAGTTAGGAATACAACCGTTTGTTTTCACATCCAGTACATTAAAATGCGCGATTTGCGATTCGAAATCCTACAGCCTCCGGAACTTAAGTAGACACACGCAGTCTCACTTCCTAAGATTGACTTGCGAGTCCTGCGGGAAGGCATTCTCCACTAAATCTACCCTCCAAGTTCACATAAGAACCTCGCACATCAAAACTAAAGAGTATCCGTGTTACAAATGCAAATCTTGCTTCAGTACTACTGAAGAAAAAAGAAATCATTTGAACGCGTCTTCGAAATGTCGAAAATACCTGTGCAATGTATGTGGTGAACGTTTTGTGTCTggatttataaaagaaatgcaCATGACAAATGTTCACGGAGTTGCGCGGAAGCCTCATGTTTGTCCTGAGTGCGAGTTAGTATTCACAGATAAAAAACTTTTCGTAAGACATTTCAAAATTGCGCACACTGATGACAATTTTGTTTGCTCCTTCTGTGAATGGGCTATCGCTCCAGGTACCTCCATCCGTCGTCGAAATGCCAATCTAATTTGGCGCCACACGACGGCATATCCGTTCAGACTACCCAACACTTTAATGACATGTTTTGAGTGCTTAGAAACTTTTAATGAACCGGAAGAATTTAGAAAACATATGGACGTTGAGTTTAACAATATGAGAAAGCGCGGTCGAACTCTTACCAGCAGGATAAACGCCCAATACGACGTCAAAGTAGACATAACTGACCTCAAATGTAGAATATGTCATGAATCCTTCGAATCTCTTGACGATGTAGCTGCCCATTTATACTGCGTACATCGCGTTGGTATTAATTTAAACCATAAATTAGGATTGCAGCCATTCAAACTGTATAGGAACAATTATTCTTGTTTAATCTGCCACGAAAAATTTCACGATCTGCGTGCGTTAAGTAGACACATGCAAGGtcataatttaaattacatGTGCGAGGCTTGCGGCAAAGCTTATGGAAACGAGGCAAGTGTCAGAGCGCACGCGAGAAACTCTCATGGGGAGTACAAAACATACTGTTTGAAATGTAGAAAAGGCTTTAACTCCAGCGAGGAGAAAAGGTTGCACATTCTAGGCTCTGAACGCTGTTGGCCATATGTTTGCAACTTTTGTGGTATACGATGTCTCTCAAAAGCTACAAAACAGAATCATTTGACCGAAGAACATGGTTACAAACCACCGCTTTACAGATGCCCTGAATGCGATATGATTTTCACTTCCAAGTCGAATCAAAATAGACATTTCAACACAGAACACACGGACAAATACAAATGTGCTCATTGCGAAAGAAAATTCAGCGGGAAAAAGGATCTAATAGATCATACAGTCACACATACCTCTGAAAAGCTGTACAACTGTGAGGTTTGTTACAAAAGTTTCTCTAGAAAGAAAACTTTGAAAGCCCATATGTGGAATCATAAGGAGAAGAAACGATTTGAGTGTAAACCATGTAACAAGCAGTTTAACCAGCGTGTTAGTTGGAGAACTCACATGGCTTCCTATCATCCGCACCAGAGCCCATAA
Protein Sequence: MVCVFCFESYEDSSVFRNHMDIEHKTFSVPLAFAHCSEGFVKADCTDIRCRMCSEPCANLDEAAVHLKKVHQKAVDISAQLGIQPFVFTSSTLKCAICDSKSYSLRNLSRHTQSHFLRLTCESCGKAFSTKSTLQVHIRTSHIKTKEYPCYKCKSCFSTTEEKRNHLNASSKCRKYLCNVCGERFVSGFIKEMHMTNVHGVARKPHVCPECELVFTDKKLFVRHFKIAHTDDNFVCSFCEWAIAPGTSIRRRNANLIWRHTTAYPFRLPNTLMTCFECLETFNEPEEFRKHMDVEFNNMRKRGRTLTSRINAQYDVKVDITDLKCRICHESFESLDDVAAHLYCVHRVGINLNHKLGLQPFKLYRNNYSCLICHEKFHDLRALSRHMQGHNLNYMCEACGKAYGNEASVRAHARNSHGEYKTYCLKCRKGFNSSEEKRLHILGSERCWPYVCNFCGIRCLSKATKQNHLTEEHGYKPPLYRCPECDMIFTSKSNQNRHFNTEHTDKYKCAHCERKFSGKKDLIDHTVTHTSEKLYNCEVCYKSFSRKKTLKAHMWNHKEKKRFECKPCNKQFNQRVSWRTHMASYHPHQSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702244;
90% Identity: -
80% Identity: -