Etri030623.2
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- OY041629.1:1526755-1530979[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.021 1.8 10.1 0.9 1 23 33 56 33 56 0.93 2 27 0.049 4.1 8.9 0.9 3 23 88 109 86 109 0.94 3 27 0.31 26 6.4 0.7 2 23 132 154 132 154 0.95 4 27 0.0039 0.33 12.4 2.7 1 23 159 182 159 182 0.97 5 27 1.5 1.3e+02 4.3 0.1 1 23 187 210 187 210 0.89 6 27 0.00036 0.03 15.6 1.0 1 23 215 238 215 238 0.94 7 27 0.00033 0.028 15.8 0.4 2 23 246 268 245 268 0.97 8 27 0.14 12 7.5 0.0 2 23 275 296 274 296 0.96 9 27 5.2e-07 4.4e-05 24.6 0.6 1 23 302 324 302 324 0.96 10 27 1.1e-05 0.00096 20.4 2.1 1 23 330 353 330 353 0.95 11 27 3.9 3.4e+02 2.9 4.3 1 23 436 457 436 458 0.94 12 27 0.012 1 10.9 0.7 2 23 533 554 532 555 0.94 13 27 0.00074 0.063 14.7 0.3 2 23 561 583 560 583 0.92 14 27 0.06 5.1 8.7 5.6 1 23 586 609 586 609 0.95 15 27 0.0025 0.21 13.0 0.6 1 23 615 638 615 638 0.94 16 27 0.0062 0.53 11.7 0.6 2 23 646 668 645 668 0.95 17 27 0.062 5.3 8.6 0.6 1 23 673 695 673 695 0.98 18 27 5.3e-08 4.5e-06 27.7 0.4 1 23 701 723 701 723 0.98 19 27 0.084 7.2 8.2 0.2 1 23 797 819 797 819 0.96 20 27 1.3 1.1e+02 4.4 0.0 2 23 845 867 844 867 0.93 21 27 0.63 53 5.4 0.1 3 23 891 912 889 912 0.93 22 27 0.00078 0.066 14.6 0.2 3 23 920 941 919 941 0.97 23 27 0.0017 0.14 13.5 0.6 3 23 948 969 947 969 0.95 24 27 0.012 1 10.8 2.3 1 23 975 998 975 998 0.98 25 27 0.0013 0.11 13.9 2.2 2 23 1005 1027 1004 1027 0.95 26 27 0.028 2.3 9.7 1.3 1 23 1033 1055 1033 1055 0.94 27 27 0.018 1.5 10.3 1.2 1 23 1061 1084 1061 1084 0.89
Sequence Information
- Coding Sequence
- ATGGAACTTGCGCGTAAGTTGCTAACAAAACGACGCAATGTCGAGTATATCTTACAGTACAGCAACGTCACTCCGTTCACATGGCACAAATCCAAATATAAATGCTTCTACTGTTTTGAAGTTATGAAAGACCCCAGTTATCTCAGACAACACACCGCTGAGAACCACGCGGATGCAAACCTAGAGCTAATAATTTACGATAGAACAAAAAGCAATAGGAATAAAGACGCGGCGATCAAAATAGACGTGACTGACATATGTTGCAAGCTGTGCACGCAATCTTTGAACTCACTGGAAGAACTTATCCATCATATAATCATAGCTCATGATGCTGAGTACAATGTTAACATCCCGAACTGTGTGCTTCCTTTTAAACTGGATAAGGACGCCCCTACTTGTGCCACCTGTGATTCTAAATTTGCCTTCTTTGAGTACTTATTGCGGCACGCAAATAAATACCACCTCTCCCATCAATTCGTCTGCGATGTCTGTGGAACGAGCTTCCAAGGGGAGATCCATCTTAAAATGCATCATAGATACTACCACCGCGAAGGTGGCTACATCTGTGAAACTTGCGGTATCAGTCTCGCTACGATATCTAAGAAAATCTTGCATGAAAAGAACGTTCACAACGTTAATCTCTACACTTGCCCACACTGCCCGGAAACCTTCAAAAGCCCTTATCTAAAGAAGCTTCATCTAGCCAATGACCACGGAGTAGAGGAGCTCAAAATCAAATGCCCATATTGCTTCAAAGTGTTCCCACAAGAGAGCATTATGTCGAGGCACATGAGACGGGTTCATTTGCGAGAGAAGAATGTAGAGTGCGGTGTCTGTGGAGACAAATTCTTTGGTCCCTACGACGTGAAACTTCACATGCTAAAACACAACGGGGATAAGAAATTCGTCTGCACAGTTTGCGGAAAGAAATTCGCAAAAAAGAGCAACTTAAACTCTCACATGGTCTTGCATACGAGAGAGAAGAACTTCTTGTGTCAAGTATGCGATAGATCCTTCGCGCATCAAGCGACTTTAAAGATGCATATGCGAAGCCGACATCAGCATATTGACTTTAAGAATGATGTTGAAAGTATAGCTCTTCAAGATGAGAGGATAGAGTATGAAGATGAACTGAGAAATGACGATGAAGAAGAGGGGATTGAGCTTGAGGATCAGAATATCGAAGTGATTGAAGGTAGCGACACACAGGGCAGTTATCTGGACCGACTTGGTATACTCAGACGCAACATTAACACCGTCCTTCGCTACTCAAACGTAACCCCTTTCAATTGGAACACGAAAGGCTTCCGTTGCTTCTACTGCTCAAAGCAGTTGCGAGAATCCAATATTAAAGAACACACAGACAAACATCATGTTGAAGATTTGGATAGCTTTCTCAAAAAGAATGTTATAACTAAAGATATACCAGTCAAAATTGATATAACAAATCTAGCTTGCAATTTCTGTCCTGAAACCCCAATCGCGTCTTTAGATGAAATGGTATCGCATATAGTTGAAAACCACAACGAATTCTATGATACAGAGACAGAAGTATGCTTCTTCCCTTTTCTTCTCAAGAaagataacaatataataagTTGCGTTTTATGTGAGACGGAATTTGACAACTTTCCGTCCCTTATAACGCACATGAATAAGCATCATGTTACACACTCAGTTGTATGCCAAGTATGTGGTCTCAGTTTCAAAGACCAGGTTCGCTTGAACAGGCATTTCACTGTTAGTCACATCGGTCACCGTTGTACGATCTGCGACAAAACCTTCGAGGCATACCACAAATTAGATAAACATAAGGAGAAATTCCACGGGCAAGTCAAAAATTACGACTGCAATCTCTGCACTAGTATCTTTAAAAGCAACTATCAACTCAAAGTTCATTTAGGGAAGGTCCACAACGTCCAGAAATATAGGATCAAATGTGAACAATGCGATAAAATTTGCACTACTAAAGGCGCTATGGTCTTGCATGTCCAAAGTCTGCATTCAGACATCAGATACCAGTGTGATGAGTGCGATTATACGACAGGCATTAAATGGTTGGTTAAGTTACACAAGCGAAAGCACACAGCGGTCAAAGATTATGTTTGTAGTGTGTGTGAGAGAGCATTCCGTCGGTCGAGCAATCTGAGAGCTCATATGAAAATCCACGCGGGAGAACCTAGAGGTGGCCAGAAAGCAAACCCATTGATAAAACCCACACCAGCACCGCTCAAACGACCCGTCAAAAGCTTTGCACCATCCTCAAGCGTACTCGCAACACGACCCAAAGGTTTATCCAGTAAGGACAAACGGAACATAATGATCCAAAACGTACTAGCGATTCTCCAGAAAACAACCGCCATGCCTTTCCGTTGGTTAAAGAGTTCTTACCGTTGCTTCTATTGCTACGACATCTTCCAAGAGGCGTCTGACTTAAAAGCGCATCAAGCAGCACACAGCGATGATTCCATCAAGGAAAAGGCAATGAACAACTATTGGGAGCCAGTTGTGTACATCGATATATCAAACATGAAATGTCTTCTGTGCCCTGAAGACGTAACAGATCTATACGATATGATCAATCATTTGGTCTCTCAACACAGCGTGGTTTATAACAAAGATGTAGGGACTTGTATGGTAGCTTTTAAGCTAAACAACTTTGATGTTAGTTGTCTTGCTTGTGGTGCTAGCTTCTACTCTTTCGGTCCATTGTTgaatcacacaaataaagaccATAAAGGAGCATCCGTCATCCTCTGCGACATATGCGGTCAGAACTATAAAGACCAGAATCTTTTACGTCTCCACGTAAAATCTGCTCACGACAACAGTGGCATGCTATGCCCAGAATGTGGTGACAAATTCGAGACGCGATCGAAATTAAAAACACACCAAATCAACAGTCACGGGGTCGAGCGCAAATTCAAATGCCTCGTCTGTGATCTGACCTTTGGAAGTCACTATAAAAGATCTCGACACATGGCGACCGATCACAAAAACCGTCAAGAGATCAAATGTCTACACTGCCCGAAGACTTTCGTCTTTCGCAGCATGATGATGACGCATCTTAGAGACACTCATTTGAAAGTGCGTAACCATATCTGCGGAATTTGCGGTTGGAAGGCTTTTAACAGTAATCGATTGAAGAATCACATGTATAAACATAGTGGGGAGAAGAATTTCAAATGTGATTCCTGTGATAAGGCGTTTACGACGCGGAAAATCATGAAAGCTCATTTCGCGAGGATGCATAAGCCCCCAGAAGCAACCCCTGTAGTTCCAATCATGACGCATTATGGTCAGTACGGTGGACAATAG
- Protein Sequence
- MELARKLLTKRRNVEYILQYSNVTPFTWHKSKYKCFYCFEVMKDPSYLRQHTAENHADANLELIIYDRTKSNRNKDAAIKIDVTDICCKLCTQSLNSLEELIHHIIIAHDAEYNVNIPNCVLPFKLDKDAPTCATCDSKFAFFEYLLRHANKYHLSHQFVCDVCGTSFQGEIHLKMHHRYYHREGGYICETCGISLATISKKILHEKNVHNVNLYTCPHCPETFKSPYLKKLHLANDHGVEELKIKCPYCFKVFPQESIMSRHMRRVHLREKNVECGVCGDKFFGPYDVKLHMLKHNGDKKFVCTVCGKKFAKKSNLNSHMVLHTREKNFLCQVCDRSFAHQATLKMHMRSRHQHIDFKNDVESIALQDERIEYEDELRNDDEEEGIELEDQNIEVIEGSDTQGSYLDRLGILRRNINTVLRYSNVTPFNWNTKGFRCFYCSKQLRESNIKEHTDKHHVEDLDSFLKKNVITKDIPVKIDITNLACNFCPETPIASLDEMVSHIVENHNEFYDTETEVCFFPFLLKKDNNIISCVLCETEFDNFPSLITHMNKHHVTHSVVCQVCGLSFKDQVRLNRHFTVSHIGHRCTICDKTFEAYHKLDKHKEKFHGQVKNYDCNLCTSIFKSNYQLKVHLGKVHNVQKYRIKCEQCDKICTTKGAMVLHVQSLHSDIRYQCDECDYTTGIKWLVKLHKRKHTAVKDYVCSVCERAFRRSSNLRAHMKIHAGEPRGGQKANPLIKPTPAPLKRPVKSFAPSSSVLATRPKGLSSKDKRNIMIQNVLAILQKTTAMPFRWLKSSYRCFYCYDIFQEASDLKAHQAAHSDDSIKEKAMNNYWEPVVYIDISNMKCLLCPEDVTDLYDMINHLVSQHSVVYNKDVGTCMVAFKLNNFDVSCLACGASFYSFGPLLNHTNKDHKGASVILCDICGQNYKDQNLLRLHVKSAHDNSGMLCPECGDKFETRSKLKTHQINSHGVERKFKCLVCDLTFGSHYKRSRHMATDHKNRQEIKCLHCPKTFVFRSMMMTHLRDTHLKVRNHICGICGWKAFNSNRLKNHMYKHSGEKNFKCDSCDKAFTTRKIMKAHFARMHKPPEATPVVPIMTHYGQYGGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700319;
- 90% Identity
- iTF_00696656;
- 80% Identity
- -