Basic Information

Insect: Eupithecia tripunctaria
Gene Symbol: -
Assembly: GCA_955876795.1
Location: OY041628.1:623645-627722[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.06 5.1 8.6 5.6 1 23 123 145 123 145 0.97

2 16 1.4e-05 0.0012 20.1 2.6 1 23 152 174 152 175 0.95

3 16 3.7e-05 0.0032 18.7 4.2 1 23 182 204 182 204 0.98

4 16 7.1e-05 0.006 17.9 0.4 1 23 211 233 211 233 0.98

5 16 8e-05 0.0068 17.7 2.7 2 23 239 260 238 260 0.97

6 16 6.9e-05 0.0059 17.9 0.3 2 23 265 288 264 288 0.92

7 16 0.00025 0.022 16.1 1.1 1 23 294 316 294 316 0.97

8 16 7.5e-07 6.4e-05 24.1 2.4 1 23 322 344 322 344 0.98

9 16 4e-05 0.0034 18.6 2.7 1 23 349 371 349 371 0.98

10 16 7.6e-05 0.0064 17.8 0.4 1 23 377 399 377 399 0.97

11 16 2.6e-06 0.00022 22.4 1.6 1 23 404 426 404 426 0.98

12 16 1.2e-05 0.001 20.3 0.6 1 23 432 456 432 456 0.96

13 16 3.5e-06 0.0003 22.0 1.2 1 23 462 484 462 484 0.97

14 16 4.2e-08 3.6e-06 28.0 0.5 1 23 490 512 490 512 0.98

15 16 0.00025 0.021 16.1 0.2 3 23 520 540 518 540 0.97

16 16 0.00022 0.019 16.3 4.4 1 23 546 568 546 568 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.06	5.1	8.6	5.6	1	23	123	145	123	145	0.97
2	16	1.4e-05	0.0012	20.1	2.6	1	23	152	174	152	175	0.95
3	16	3.7e-05	0.0032	18.7	4.2	1	23	182	204	182	204	0.98
4	16	7.1e-05	0.006	17.9	0.4	1	23	211	233	211	233	0.98
5	16	8e-05	0.0068	17.7	2.7	2	23	239	260	238	260	0.97
6	16	6.9e-05	0.0059	17.9	0.3	2	23	265	288	264	288	0.92
7	16	0.00025	0.022	16.1	1.1	1	23	294	316	294	316	0.97
8	16	7.5e-07	6.4e-05	24.1	2.4	1	23	322	344	322	344	0.98
9	16	4e-05	0.0034	18.6	2.7	1	23	349	371	349	371	0.98
10	16	7.6e-05	0.0064	17.8	0.4	1	23	377	399	377	399	0.97
11	16	2.6e-06	0.00022	22.4	1.6	1	23	404	426	404	426	0.98
12	16	1.2e-05	0.001	20.3	0.6	1	23	432	456	432	456	0.96
13	16	3.5e-06	0.0003	22.0	1.2	1	23	462	484	462	484	0.97
14	16	4.2e-08	3.6e-06	28.0	0.5	1	23	490	512	490	512	0.98
15	16	0.00025	0.021	16.1	0.2	3	23	520	540	518	540	0.97
16	16	0.00022	0.019	16.3	4.4	1	23	546	568	546	568	0.97

Sequence Information

Coding Sequence: ATGCTCGAAAACCTTACAAATCTCAAGTATGAGGACAACCAGTACCAAGAACTATGCATGATGTGCTACGCAGAGTTGCAGAAATGTTACAAGTTCATCAGCAAGGCACAAAGGTCCTACAGCACACTCCAAGGTCTACATTTAAGAGGattggtagtagAGTCTATCACGATGTGCATCGCCGAGTCAAGTGATAGTCTTGAAAAAGCTGTAAAGGAAGAACCCCTTGctttaaaagaagaagaaatacACGAAGAATCTGTCTTTGAAGACGCCTTTGATGATATTGATGATGAACCTCTTAAGAAACCTCTTAAACTAGAAGATACTTCGTCAAGAAGAGAGCAGAATAGTGCCGGGGAATCATACTTCTGCTATAAATGCAATATATCATTCAATCTCAAATTTCATTATGAAAAACACTCAAAGATACACGCAGAAGAAGAGAAGATATACGCTTGCAATGACTGTcctaaaaaatttaaacttaaaaGAAGTTTAGTTAAGCACATTTTAAAACACCacagagaaaaaacaaaaatctaccCTTGCAATAAATGTACTAAAAAATTTCATCGCAAAATTGCATTGAAAAAGCATTTACTCACCCATATCGATAGTCCAGAAGAATTCACATGTGAAATTTGCAATAGAGCCGTCAATAACCTATACAATCTCCTAAAACATAAAGCAACGCATACAGAAAATTCTTTGACTTGTCAAACATGTGGCAAAAACTACCTCAACAAAAATACACTAAAGAAACACATGCGCACTCATAATCTCCAACACGCTTGCGAGCAACCTGGCTGTGGCAAGATCTTTGCGCAGAAAAATCAACTGACAATTCACTCTAGAGTACACAGCGGAGAAAGACCTTTTGCTTGCAGCAAATGTAATAGATCCTACACGCTCTTAGACTCTTTGAAATACCACCTAAGAGCTCACGAAGGAAACAGACCATACAAGTGCAACCTATGCGAGAAAGCCTTCTACAGAAAATTCAATCTAACAAACCACATGAAAGCGCATGAAAGGGAGTCTTACAACTGTTTGCATTGCAGCAAGACCTTTACTTTACCTGTTCATTTAGAAACTCATATGCTTATCCATACTGCATTAAAACCTCATTCGTGCAGGCTCTGTGATTTAACCTTCGCCGCACCAAGCAGTTTGAAAGCACACATGGTAACCCATACGGACTATTTGTTTACTTGCGACCGATGCGCGAAGAGCTTTCGCGACAAAAGCAGCTTGCAAAGCCATATAAAACTGCACGATGGCATCAAACCTCACGTCTGTCCGGAACCAAACTGTGGGAAAGCATTCGTCCGGAAATTTCAACTCAAAGAACATTCGAGAGTACATTCTGGAGAAAGACCGTATATTTGCAATGAGTGTGGCAAGACGTTTACACAGAGCAGCTCTTTGCTTTTCCACCAGAGACTTCACAGTGGAGAGAGACCGTACATCTGTGAAATTTGCGGAAGATCTTTTACTGATAAATATGGCTTGCAGAAACATACTCGAGTTCATACAAATGAGAAGCCCTATGGTTGTGATAACTGTGATTTGAGGTTTGCGTATCCTAGTGCGTTGCAAAAACATAGTTCGACCCATAGCGGGGAGAAACCGTTCGCGTGTGAGAGGTGTTATAAGATTTTTGGCCGGAAGTGTAGTTTGAGAAAACATATGAAGATGCATTTGAGAGAAAAATTTCAGAGCCCTTCGCTTCTACCTGCaaaatga
Protein Sequence: MLENLTNLKYEDNQYQELCMMCYAELQKCYKFISKAQRSYSTLQGLHLRGLVVESITMCIAESSDSLEKAVKEEPLALKEEEIHEESVFEDAFDDIDDEPLKKPLKLEDTSSRREQNSAGESYFCYKCNISFNLKFHYEKHSKIHAEEEKIYACNDCPKKFKLKRSLVKHILKHHREKTKIYPCNKCTKKFHRKIALKKHLLTHIDSPEEFTCEICNRAVNNLYNLLKHKATHTENSLTCQTCGKNYLNKNTLKKHMRTHNLQHACEQPGCGKIFAQKNQLTIHSRVHSGERPFACSKCNRSYTLLDSLKYHLRAHEGNRPYKCNLCEKAFYRKFNLTNHMKAHERESYNCLHCSKTFTLPVHLETHMLIHTALKPHSCRLCDLTFAAPSSLKAHMVTHTDYLFTCDRCAKSFRDKSSLQSHIKLHDGIKPHVCPEPNCGKAFVRKFQLKEHSRVHSGERPYICNECGKTFTQSSSLLFHQRLHSGERPYICEICGRSFTDKYGLQKHTRVHTNEKPYGCDNCDLRFAYPSALQKHSSTHSGEKPFACERCYKIFGRKCSLRKHMKMHLREKFQSPSLLPAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700314;
90% Identity: iTF_00701281;
80% Identity: -