Basic Information

Insect: Eupithecia inturbata
Gene Symbol: -
Assembly: GCA_963662085.1
Location: OY759204.1:7815054-7816691[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0067 0.49 11.6 7.5 1 23 83 105 83 105 0.95

2 16 9.1e-06 0.00067 20.6 1.3 1 23 112 135 112 135 0.97

3 16 0.0011 0.079 14.1 3.6 1 23 142 164 142 164 0.96

4 16 1.3e-05 0.00097 20.1 0.6 1 23 174 196 174 196 0.98

5 16 1.2e-05 0.00091 20.2 1.8 2 23 202 223 201 223 0.97

6 16 6.1e-05 0.0045 18.0 0.3 2 23 228 251 227 251 0.92

7 16 0.00013 0.0095 17.0 1.4 1 23 257 279 257 279 0.97

8 16 9.6e-07 7.1e-05 23.7 2.3 1 23 285 307 285 307 0.98

9 16 3.5e-05 0.0026 18.7 2.7 1 23 312 334 312 334 0.98

10 16 8.1e-05 0.006 17.6 0.2 1 23 340 362 340 362 0.97

11 16 2.2e-06 0.00016 22.5 1.6 1 23 367 389 367 389 0.98

12 16 1.5e-05 0.0011 19.9 1.0 1 23 395 419 395 419 0.97

13 16 3.1e-06 0.00023 22.1 1.2 1 23 425 447 425 447 0.97

14 16 3.7e-08 2.7e-06 28.1 0.5 1 23 453 475 453 475 0.98

15 16 0.00022 0.016 16.2 0.2 3 23 483 503 481 503 0.97

16 16 0.00013 0.0094 17.0 4.7 1 23 509 531 509 531 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0067	0.49	11.6	7.5	1	23	83	105	83	105	0.95
2	16	9.1e-06	0.00067	20.6	1.3	1	23	112	135	112	135	0.97
3	16	0.0011	0.079	14.1	3.6	1	23	142	164	142	164	0.96
4	16	1.3e-05	0.00097	20.1	0.6	1	23	174	196	174	196	0.98
5	16	1.2e-05	0.00091	20.2	1.8	2	23	202	223	201	223	0.97
6	16	6.1e-05	0.0045	18.0	0.3	2	23	228	251	227	251	0.92
7	16	0.00013	0.0095	17.0	1.4	1	23	257	279	257	279	0.97
8	16	9.6e-07	7.1e-05	23.7	2.3	1	23	285	307	285	307	0.98
9	16	3.5e-05	0.0026	18.7	2.7	1	23	312	334	312	334	0.98
10	16	8.1e-05	0.006	17.6	0.2	1	23	340	362	340	362	0.97
11	16	2.2e-06	0.00016	22.5	1.6	1	23	367	389	367	389	0.98
12	16	1.5e-05	0.0011	19.9	1.0	1	23	395	419	395	419	0.97
13	16	3.1e-06	0.00023	22.1	1.2	1	23	425	447	425	447	0.97
14	16	3.7e-08	2.7e-06	28.1	0.5	1	23	453	475	453	475	0.98
15	16	0.00022	0.016	16.2	0.2	3	23	483	503	481	503	0.97
16	16	0.00013	0.0094	17.0	4.7	1	23	509	531	509	531	0.97

Sequence Information

Coding Sequence: ATGAGACCTATTCAAAACTTATCAGTAAGTTCTGCGGAGTCTATGGCCACGATATACATTGTCGAATCAAGTGATAGTTTAGAAAAAGCCGTAAAGCAAGAACCACTCGCTTTAAAAGAAGAAGATATACATGAAGAATCTTTTTTTGATGATGCATTTGACGAAAATGATGATGAACCTCTTAAGAAACCTCTTAAACTAGAAGATACTGCGTCAAGAACAGAGAAAAATAGTGCCGATGAACCATTTCTCTGCTTTAAATGCAATTTATCTTTCAATCATAAATTTCACTATGAAAAACACTTAAAGATACACACAGAAGAAGAAAAAGTATACGCTTGTAATGACTgtcctaaaaattttaaacttaaacgAAGTTTAGTTAAACACATGCTAAAATTCCACAGAGAAAAGACAAAACTGTACCCTTGCACGAAATGTACTGAGAAATTTCATCGCAAAATCGCCTTGAAAAAGCACTTACTCTTCCATAAAGATACAATTGATCCTGTAGAAGAATTCACATGTGAAATTTGCAATAGAGTCGTTAACAACCTGTACAATCTCCAAAAGCACAAGGCAACACATACAGAAGATTCTTTAACCTGTCCAACATGTGGCAAAAACTACCTTAACAAAAATACACTGAAGAAACACATGCGAACACACAACCTACAACATGCTTGCGAACAACCAGGCTGTGGAAAGATATTTGCGCAGAAAAATCAGCTAACTATTCACTCTAGGGTTCACAGTGGGGAGAGACCATTTGCTTGCAACAAATGTAATCGATCCTACACGCTCTTGGACTCCTTGAAATACCACCAAAGAGGTCACGAAGGAAATAGGCCATATAAGTGCAGCCTATGCGAGAAAGCCTTCTACAGAAAGTTCAATTTAACCAATCATATGAAGGCCCATGAAAGAGAGGCATACAACTGCTTGCATTGCAGCAAAACCTTCACCCTACCTGTGCATTTAGAAACTCATATGCTTATCCATACTACATTAAAACCTCATATGTGTGGTCTCTGTGATTTAACCTTTGCAGCTCCAAGTACTTTGAAAGCCCACATGGTAACCCATACTGACTACATGTTTACTTGCGAGCGATGCGCGAAAAGCTTCCGCGACAAAAGCAGTTTGCAAAGCCATATAAAACTGCACGATGGCATCAAACCCCACGTCTGCCCTGAACAGAACTGTGGAAAAGCTTTCGTCCGGAAATTTCAACTAAAAGAACATTCTAGAGTACATTCTGGAGAAAGACCGTACATTTGCAATGAGTGTGGTAAGACCTTTACACAGAGCAGCTCTTTACTTTTCCATCAAAGACTTCATAGTGGTGAAAGACCATACATATGCGAAATATGTGGAAGATCCTTCACAGATAAATATGGCTTGCAGAAACATACTCGTGTTCATACAAATGAAAAACCATACGGTTGTGACAACTGTGATTTAAGATTCGCGTATCCTAGTGCGTTGCAGAAACATAGTTCGACTCATAGCGGGGAGAAACCGTTCGCGTGTGAGAGGTGTTATAAGATATTTGGGCGGAAGTGTAGCTTGAGGAAACATATGAAGACGCATTTGAGAGAAAAGTTTCAGAGTCCTTTGCTTCTGCCTGCTAAATGA
Protein Sequence: MRPIQNLSVSSAESMATIYIVESSDSLEKAVKQEPLALKEEDIHEESFFDDAFDENDDEPLKKPLKLEDTASRTEKNSADEPFLCFKCNLSFNHKFHYEKHLKIHTEEEKVYACNDCPKNFKLKRSLVKHMLKFHREKTKLYPCTKCTEKFHRKIALKKHLLFHKDTIDPVEEFTCEICNRVVNNLYNLQKHKATHTEDSLTCPTCGKNYLNKNTLKKHMRTHNLQHACEQPGCGKIFAQKNQLTIHSRVHSGERPFACNKCNRSYTLLDSLKYHQRGHEGNRPYKCSLCEKAFYRKFNLTNHMKAHEREAYNCLHCSKTFTLPVHLETHMLIHTTLKPHMCGLCDLTFAAPSTLKAHMVTHTDYMFTCERCAKSFRDKSSLQSHIKLHDGIKPHVCPEQNCGKAFVRKFQLKEHSRVHSGERPYICNECGKTFTQSSSLLFHQRLHSGERPYICEICGRSFTDKYGLQKHTRVHTNEKPYGCDNCDLRFAYPSALQKHSSTHSGEKPFACERCYKIFGRKCSLRKHMKTHLREKFQSPLLLPAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700314;
90% Identity: iTF_00705284; iTF_00700314;
80% Identity: -