Etri004926.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia tripunctaria
Gene Symbol
PAXBP1
Assembly
GCA_955876795.1
Location
OY041600.1:15750195-15768555[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-08 0.0006 20.4 0.0 5 50 505 550 475 585 0.85
2 2 0.00016 2.8 8.4 0.0 125 190 605 670 592 679 0.73

Sequence Information

Coding Sequence
ATGTTTCGCAAGCCTAAAAAAATACAGAGACGTGTTTTCTGTGCTGATGATGACGACGACGATGATCCGGAgcctccgccgccgccgatcaTCAGTCAGGAGTCACTGGAGAAGAaggaaagaaaagaaaagaaagagaaTAAGCCTGTGAAGAGTGTGGCGCTTCTCAGTTTCGCTGATGAGGATGATGAATGTGAGGAGTTCAAAGTGAAGAAATCATCCCAAAGCAAGCGCCTGTCCAAACGTAGAGATAAGGAAAAAAAGAAATTGCCCGATGgtgataataacaaaaatgaCAGTAACGGCCACGAGGAAAATACAAACCACACGGAGAAAAACGTGAAGCCAAAGAAGAAAGTGACTCTAGAGGGGCTGATTCTCTCCGGTCGTGAGGCGCTGGCTGCAGATGGGGCTGGGGATGTATCGGAAGAGGAGATGGAGGATGACAGGGGGTTCCACACGTACCGCGCCGAGTCGGTCAGGGCTGCGCTGGCGGGCGCGGGGGGACCCATCCCCGACGCTGCACTTATCCACGCAGCGCGCAAGACTAGACAGCAGGCCCGCGAACTTGGGGACTTCGTGCCGATTCGGTCAGAACCCGCGGCCGGGTCGCGGCTCGTGCGGGAGGGAGACGACTCTGCGGACGACGAGGACGACCGCATAGCAGTCCGGGGGCTGGAGATGCCTAGCGATAAGCCTCAGCgtGGCACCGCCGCTATGGACCCGGAGGAAGAAGACAACAGCGAGACGGAGGTGTGGGCGGAGCAGCAGATGCAGAAAGCAATGCCGGCCATCATTGATATTACAGGAGAAGGCGCAATAGAGTTGAATCCGTTCGCAGtggcgcccccgccgccgcggATGCCGATGGCGCCGCACCTGCGCCCTCTCGCGGCCGCGTCGGCCCCGCAGCTGGTGATGGCACTTACGGAACGGCTAGAAGAACTTCAGCTAGATCGAATCAACACGTTCAACAAGCGAGAGGCTTTATCGCAACAGATTCTGAATCTTGCAAGAATCCGTGAAAACCGAGCAGCTCGGCGCGGGGAGCTAGACGCGGCCTACAGGCGCGCGCAGGCCGTCAGGGGGTACCTGACGGATCTGATCGAGTGTCTGGACGAGAAGATGCCGTTACTGGAGGCACTGGAGGGCCGAGCCCTAGCGCTGCACAAGCGGAGACACGAGTTCCTGGTGGAGCGGCGCCGGGCGGACGTGAGGGACCAAGCGCAGGACGTGCTAGCGCTAGCTGGTCGTCCAGGGTCCGCGCGTGCCCCCGAGTGCGCGGACAAGGTGCGTCGCACGGCGGAGCGCgaggggcggcggcgcgcgcggcgcCTGCAGCGCGCCTCGCTGCCCGGCGCGCCGCGCGCTCACCGCGACGGGGACTCCAGCGACGACGACCTGCCGCCGGATATACACCATCAGCATCTCAATGAACGAGAGAGTATCCGCGCGGGCACGGAGTCCCTGTTCTCGGACGCGCTGGCGGCGTggcgcggcgcgcgcggcgTGTGCGCTCGCCTGGGCGCCTGGCGCGCGCGCCACGCCGCCTCCTACTGCGACGCGCACATGCCGGCCGCTCTGCCCCGGCTGCTGGCGCCCTACGTCCGACATCAGCTCATATTATGGAACCCTCTTGCTGACGAAGACAATGAGGATTACGAGAAAATGGATTGGTACAAATGTCTAATGATGTATGGCGTGCGCGTAGAGCCCACGGGCGACTCCTCCGACTCGGAGGCCGAGGGCGACGCCCCGGAGCCTGGGCCCCTCAGCGAGGGAGGCGTGCGGGAGGACCCGGACCTCATGCTGGTACCCACTGTGCTCAATAAGGTTGTACTGCCCAAGATTACAGAGATAGTGGAGAACGCATTCGACCCGATGTGCGTGCGAGCGTGCGTGCGGCTGCGGGCCGTGCTGGTCCGGGCGGGCAGCGTGCCGGGCTGCGAGCGCGCGCTGCGCCAGctggcggcggcagcggcgcaCCAGCTAGCGGCAGCTCTACACGCAGATGTCTTCCTGCCGACATTACCTCCGCAAATAATGGAGGGTCCGGGCGGCGCGTTCTGGCGGCGCTGCGTGGGCGCCGGCGTGCGTCTGCTGCGCGGCGCGCTCGCCCTCACCGCGCCGCCGGCGCTGCTTAGGAACGACGACAACGTGCTGGCAATCATTGAGACGCTGAGCATGGCGCTGGGCGCGGCGCCCGGCACCTCCATGTCGTGGGCAGGCGCGGCGCTGGCCGAGACGCTGCCGCGCGGCGGCGAGCTCCGCCAGAGGGCGCTGCAGCGACTGGCTAGGCTCGCTACACTGGCGCTCACTAGACTGGACGGTGACAACCCACTGCATCTGAAATCCATTGAGCAAGCTCGGGCGGTGTTGTCAGAAGCGAAAGCGGCAGTGGTAGCGGAATGA
Protein Sequence
MFRKPKKIQRRVFCADDDDDDDPEPPPPPIISQESLEKKERKEKKENKPVKSVALLSFADEDDECEEFKVKKSSQSKRLSKRRDKEKKKLPDGDNNKNDSNGHEENTNHTEKNVKPKKKVTLEGLILSGREALAADGAGDVSEEEMEDDRGFHTYRAESVRAALAGAGGPIPDAALIHAARKTRQQARELGDFVPIRSEPAAGSRLVREGDDSADDEDDRIAVRGLEMPSDKPQRGTAAMDPEEEDNSETEVWAEQQMQKAMPAIIDITGEGAIELNPFAVAPPPPRMPMAPHLRPLAAASAPQLVMALTERLEELQLDRINTFNKREALSQQILNLARIRENRAARRGELDAAYRRAQAVRGYLTDLIECLDEKMPLLEALEGRALALHKRRHEFLVERRRADVRDQAQDVLALAGRPGSARAPECADKVRRTAEREGRRRARRLQRASLPGAPRAHRDGDSSDDDLPPDIHHQHLNERESIRAGTESLFSDALAAWRGARGVCARLGAWRARHAASYCDAHMPAALPRLLAPYVRHQLILWNPLADEDNEDYEKMDWYKCLMMYGVRVEPTGDSSDSEAEGDAPEPGPLSEGGVREDPDLMLVPTVLNKVVLPKITEIVENAFDPMCVRACVRLRAVLVRAGSVPGCERALRQLAAAAAHQLAAALHADVFLPTLPPQIMEGPGGAFWRRCVGAGVRLLRGALALTAPPALLRNDDNVLAIIETLSMALGAAPGTSMSWAGAALAETLPRGGELRQRALQRLARLATLALTRLDGDNPLHLKSIEQARAVLSEAKAAVVAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00702918; iTF_00696488; iTF_00700139; iTF_00703983; iTF_00706032; iTF_00699185; iTF_00698333; iTF_00321612;
90% Identity
iTF_00702918; iTF_00696488; iTF_00700139; iTF_00703983; iTF_00706032; iTF_00699185; iTF_00698333;
80% Identity
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