Etri010630.1
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- -
- Assembly
- GCA_955876795.1
- Location
- OY041605.1:12775114-12777294[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-07 8.7e-05 23.1 0.0 2 38 18 54 17 58 0.87 2 2 8.1 3.1e+03 -1.1 0.0 13 28 698 717 694 722 0.76
Sequence Information
- Coding Sequence
- ATGGGTCGTGTATTAAAAAAAGGAGCACCTAGAAAAATAGGGGCCACTTCTCAAGAAGAAATGAAAAAAGCCGTGCACCTGCACATCAAGAATGGAGTGAGTATTCGAAAAGCATCGAGAGATTGCAAGATACCCTACCCCACTTTACGTAGATAcgtaaaaaagtatttacagGATAGCTCAGCAGTTTTAGAGCCAAATTATACGGTAAATAAAGTATTTACATCTGAGCAAGAAGATTCCCTGCACGAGTATATTGTGGATtgttcaaataaattttatggaCTATCTACCAAAGACTGCCGCCGACTAGCTTACGAGATGGCAGAAATCAACAATATTTCTATGCCTTCAACATGGGTAACGAACAAAATGGCTGGCAAGGATTGGTTGCTAAGTTTTCGAAGGAGATATCCCGATCTCTCGTTAAAGAAACCAGAAGCCTGCAGTGTGGCGAGAGCAACTGCTTTTAATCCTATGAATGTGAAAAAGTTTTATGACAACCTCAAGGATGTGCTTCAGCGTGATGCAAGTTTTGCAGATGGATCCAGGGTGTACAACTTAGATGAAACATCAACAACAACCGTTCAACGCCCTGGAAAGATATTGACACTCAAAGGGCGAACTGCATGTAAAGTAACAAGCGGGGAACGAGGAGTGCTTGTCACAACTTGCTGCATCGTTAATGCGATTGGGCAAGCTCTGCCTCCTGTAATGGTTTTTCCTAGAAAAAACTTTAAGGAACATATGTTGTACGGCGCACCCCCTGGTACACTGGGCGTTGCTGCACCTTCAGGATGGATGAATGGAGAACTATTTGTGCAAGTTATGGCTCACTTCATCAAACATACTGCAGCGTCAAAGGACCACCCGGCATTACTGATTATGGATAATCATGAAAGCCATTTATCCTTGCAAGCACTTAACCTAGCAAAGGCATCGGGAGTAACAATTCTAACGCTCCACCCACATACAACTGCAAAAATGCAACCCTTAGATGTAGGTTTGCTGGCGCCCTTCAAGGCCTATTATAATGGTGCTGTTGATTCGTGGCTACTGCGGAATCCAGGGAGGCCCATGACTATTTATAATATCGCAGAATGCGTGGGTCCTGCATACATGAAGTCAATGACCCCAATAAATATAGTCAACGCATTTAAAAAATGTGGAATATTTCCATATGACGACCAATTATTTACTGATGCTGATTTCCTGCCAAGCACTGTGACTGATAGACCACAACCAACAATTGAAATTGAGGAAGAATCAGACGTGACAGATGCAGAAGATGTTGCTGAGCATCATGAAAATTCGATGAATTGTAATAAGACCTGTGCCTCACCATCTCTTTTGGATGAAAACACGGCTCCTCTCATAGAAAATGATACGAGAGCAGTAGTTAATTTGATGGAAGATCACAGACAATCAAGCACTTCTGCTGAACCAACCACTGCTTCAAAAGCAGTTGAACTGGTTGAAGATCATGCGCAACCAAGTACTTCTAGAGCTGCAGCAAACTTTATATCTCCTAAAGTATTTTGCAAACCCCTGAAAGCAAAACCTCGAAAAACAATACGGAAAGCAGGAAGAAGCCTCATAGCAACTGACACGCCCGAAAAGGATGCCTTAGCTGCAttgaaaaacatcaaaaataagggaatgaaaagaaaaaatactcaaGCAAAAAAAGTGAAGCAAGACTTATTCAATAAAGCTAAAAATGTACGAAGAAGTGAAAGGTCTGCTGTGGCTTCAGATTCATCCGATGATGAGCAGGCAGTATTCGAACCAAGCGGGTCATCGTCGGGTGGAGAACAATTTTGGAGCGATgcagaagaagaagaagttatTTTGAATGACGATTTTCCACCATTGACTAAAGAGCCTGTGCCTAATGATTATGTAATTATCCTATTCAAATCCAAAAACATTAATGTTTACTACGTGGCCAAAATTTTGGAGAAactagatgatgatgattgtgacTATTATGTGTCGTATCTGAAGCTTAAGAGCAAAGCTAATCAAAAGTTTGTCGAGCCAATAATTCCTGACACAGCAGGAGTAGCCATGTCagaaattaaatatgttttgCCTGCTCCTAAAGTGGAAGGTACTAGTCGCCGACAAGCTACTTTAAAATTTGACGTTGACATGTCACTTCTAAATTTACGGTTTTAG
- Protein Sequence
- MGRVLKKGAPRKIGATSQEEMKKAVHLHIKNGVSIRKASRDCKIPYPTLRRYVKKYLQDSSAVLEPNYTVNKVFTSEQEDSLHEYIVDCSNKFYGLSTKDCRRLAYEMAEINNISMPSTWVTNKMAGKDWLLSFRRRYPDLSLKKPEACSVARATAFNPMNVKKFYDNLKDVLQRDASFADGSRVYNLDETSTTTVQRPGKILTLKGRTACKVTSGERGVLVTTCCIVNAIGQALPPVMVFPRKNFKEHMLYGAPPGTLGVAAPSGWMNGELFVQVMAHFIKHTAASKDHPALLIMDNHESHLSLQALNLAKASGVTILTLHPHTTAKMQPLDVGLLAPFKAYYNGAVDSWLLRNPGRPMTIYNIAECVGPAYMKSMTPINIVNAFKKCGIFPYDDQLFTDADFLPSTVTDRPQPTIEIEEESDVTDAEDVAEHHENSMNCNKTCASPSLLDENTAPLIENDTRAVVNLMEDHRQSSTSAEPTTASKAVELVEDHAQPSTSRAAANFISPKVFCKPLKAKPRKTIRKAGRSLIATDTPEKDALAALKNIKNKGMKRKNTQAKKVKQDLFNKAKNVRRSERSAVASDSSDDEQAVFEPSGSSSGGEQFWSDAEEEEVILNDDFPPLTKEPVPNDYVIILFKSKNINVYYVAKILEKLDDDDCDYYVSYLKLKSKANQKFVEPIIPDTAGVAMSEIKYVLPAPKVEGTSRRQATLKFDVDMSLLNLRF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00377051;
- 90% Identity
- iTF_01529130;
- 80% Identity
- iTF_00704942;