Esub024259.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia subumbrata
Gene Symbol
nfxl1
Assembly
GCA_949316285.1
Location
OX438647.1:189635-192106[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 2 3.5e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 19 0.014 2.5e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 19 6.8e-07 0.012 16.6 16.1 3 19 186 202 185 202 0.95
4 19 9.3e-09 0.00016 22.5 8.1 3 19 239 255 237 255 0.91
5 19 0.16 2.7e+03 -0.6 1.8 4 13 256 265 255 266 0.78
6 19 1.1 1.9e+04 -3.2 0.9 6 10 280 284 279 284 0.86
7 19 9.5e-10 1.7e-05 25.7 12.2 1 19 290 308 290 308 0.99
8 19 6e-05 1 10.3 21.1 3 19 345 361 337 361 0.87
9 19 1.2 2.1e+04 -3.4 2.8 7 13 365 371 365 373 0.76
10 19 6.7e-06 0.12 13.4 19.0 1 18 395 412 395 413 0.97
11 19 2.3e-08 0.00041 21.2 16.9 1 19 422 440 422 440 0.99
12 19 0.0002 3.5 8.6 6.4 9 19 488 498 486 498 0.89
13 19 0.00012 2.2 9.3 6.1 1 12 508 518 508 518 0.96
14 19 0.35 6.1e+03 -1.7 3.3 14 18 547 551 547 552 0.85
15 19 2 3.5e+04 -4.8 4.4 8 12 568 572 567 582 0.62
16 19 9.2e-07 0.016 16.1 5.0 1 14 588 602 588 602 0.90
17 19 0.56 9.7e+03 -2.3 1.7 15 18 613 616 612 618 0.66
18 19 8.4e-05 1.5 9.9 14.1 1 18 628 645 628 646 0.86
19 19 1e-06 0.018 16.0 14.3 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGTCGCTACAAAGACGCAGCCGCAAAGCTGCAGCAAAATGTGCAAAAACATCTGAAGGATATGAAGGATCTCTCGTCGTCTGAGGACGAGGAGCCGTACGACACCGGCGTGCTGGAGAGCATGTTCCGCAGCTactggcgcggcggcggcgacacGCACATGCTCAACAGGACCAAGAACCTCCTGGAGGAAGCCATAAGCGGCCGCGCCGTGGCCTGCCTCATCTGCATCAGCTCCATCAAGCGCGCGCACGCCGTGTGGAGCTGCGACCACTGCTACTCGCAATTCCACCTCGCCTGCATACAGAAGTGGGGCAACGACTCTATCAGCCTTCGCAGCATCGAGCCGCAGGCGCCGATCAGCGTCTACAGGCCGCTCAAGATCGAGTGGTGCTGTCCGAAGTGCCGCAACTCGTATAGCAAGGACGAGATCCCGCGCAAGTACCGCTGCTTCTGCAGCAAGACCGACAACCCACCCGTGCACCCCTGGCTGCTGCCCCACACCTGTGGGGAGGTGTGCGAGAAGAGGCTCTCCACAGGAGACAACTGCAAGCACAAGTGTGTGCTGCTGTGCCACCCGGGGCCGTGCCCACCCTGCCCCCAGACTGTGAATGGAATATGCTACTGTGAAAAGGAACAGAAGAAAGTCAGATGTAGTGCAGCAAAGTGGTCATGTGGCTATCAATGTAAGAAAACTTTGCTTTGTCAGACACACAAATGTGAGCTGATCTGCCACGAAGGAGAGTGTCCGTCGTGCACCCATACCAGCATCCAGCCGTGCCACTGTGGAGCCAAAAAGACCAAAAGACCCTGCGATGACCCTTTCTGGCACTGCAAAAAACCTTGCAATAAACCATTCTCATGTGGCTACCATAAATGTGAAAGAGTCTGCCATTCTGGCAGCTGTGAGGAATGTCCGAATTCAGGCATGAGATCCTGTCCCTGCGGAGCGAACCAAACACATGTGCAATGTCCTGATACCATGGAGACCTGTCTGGGGACTTGCGGCAAGCAGCATCAGGAGTGTGACCATGGCTGCCCCGAGAAATGCCACAAGGGACCCTGCCCTCCGTGCCAAGTCATGATCCAGAAGAAGTGTCACTGTGGCTTGCACATGCGCTCCTTGCCGTGCAGTAAGGAGTACAAGTGTGACACCAAGTGCAGAGGGACCAGGCCTTGCGGGAAGCATGGCTGCTCCAGGAAGTGCTGCAATGGAAACTGTCCTCCATGTGAAAAGACGTGCGACAAGCCCCTGCAGTGTGGCCGCCACAAGTGCACCACCATCTGCCACCACGGGCCTTGCTATCCCTGCCCCCTGGAATCCAAAGTAACTTGCAAATGCAAGGAAACCTACATCACAGTCCCATGCGGGAGAGAGCGCTTCACAAAGCCACCGAAATGTAGCCTCCCTTGTAAAGTGAAGTACAAGTGTGGACATCTTGAGGAAAATAAGCATTCCTGCCATTTCGGAGACTGTCCTCCTTGCAAAGCGATCTGCTACAAAGCATACCCAAAGTGCGGTCATAAGTGCAACGCTATTTGTCATGAATATAAAGCTGTAGTCTTCAAGCAGATCGAGAAACCTGCCACGCCCTGGGATATACAACCGCCGAAGACTAAGATCATGACCTTGGAATGTCCTCCCTGCAACTTACCTGTCTCCGTGGTCTGCTTCGGCGAGCATGAGACCGACAGCCAGCCGTGCcacgcggcggcgcggcgccccTGCGGACGGCCGTGCGGGAAGCCTCTGGCCTGCGGAAACCACAACTGTACTCGACTCTGCCATCTAAGCGGTCCCGATCCTAACTATCCAAATGTTCCATCCAGCTGCAAGCCTTGTCATAGAGAATGCGCTAAGCTCCGTCCCGCGAAGTGCTCGCACAAGTGTGCGCGGCGCGCGTGCCACCCCGGCGCGTGCCCGCCGTGCGGCGTGCTGGAGCGCGTACCCTGCCACTGCGCCGTGACCGAGCTCTACCTCAAGTGCACGGAGTACTGCAGCGCCACCGAGGACATTTTGTCGTGCAAGCAGCAGTGCCCCAGGAACCTGGCGTGCGGACACCGCTGCAAGAACACCTGCCACTCGGGACCCTGCGGCGAACAGGTCTGCACCAAGAAAACTAAGATACACTGCCCCTGCGGCAACTTAAAGAAGGAAACGCCTTGCAATACCATCAGAAGTGGCGATGCCAAAGTCGCGTGTGATAACACCTGCGAAGCCAAGAAAGCTGCCGCAAAGCTGGAGAAAGAGAAGGAACAACAGAGGCTGAAGCAGCTGGAGGAGGAGAGGAACAGGCGGGAGCTGGCCGAGTACGAGTGGAAGCTCAGCGGGAAGAAGAAGAAATATAAGGAAAAGAAGGTTGTGATAGATATGCAGCAGAAGAGCTGGCTACAGGAATACTGGATGGCAATATTGCCCTTTTTAGTTGTTATCATTGCAACTGTTTACTATTTATCCCTTATTTAG
Protein Sequence
MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYDTGVLESMFRSYWRGGGDTHMLNRTKNLLEEAISGRAVACLICISSIKRAHAVWSCDHCYSQFHLACIQKWGNDSISLRSIEPQAPISVYRPLKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLLPHTCGEVCEKRLSTGDNCKHKCVLLCHPGPCPPCPQTVNGICYCEKEQKKVRCSAAKWSCGYQCKKTLLCQTHKCELICHEGECPSCTHTSIQPCHCGAKKTKRPCDDPFWHCKKPCNKPFSCGYHKCERVCHSGSCEECPNSGMRSCPCGANQTHVQCPDTMETCLGTCGKQHQECDHGCPEKCHKGPCPPCQVMIQKKCHCGLHMRSLPCSKEYKCDTKCRGTRPCGKHGCSRKCCNGNCPPCEKTCDKPLQCGRHKCTTICHHGPCYPCPLESKVTCKCKETYITVPCGRERFTKPPKCSLPCKVKYKCGHLEENKHSCHFGDCPPCKAICYKAYPKCGHKCNAICHEYKAVVFKQIEKPATPWDIQPPKTKIMTLECPPCNLPVSVVCFGEHETDSQPCHAAARRPCGRPCGKPLACGNHNCTRLCHLSGPDPNYPNVPSSCKPCHRECAKLRPAKCSHKCARRACHPGACPPCGVLERVPCHCAVTELYLKCTEYCSATEDILSCKQQCPRNLACGHRCKNTCHSGPCGEQVCTKKTKIHCPCGNLKKETPCNTIRSGDAKVACDNTCEAKKAAAKLEKEKEQQRLKQLEEERNRRELAEYEWKLSGKKKKYKEKKVVIDMQQKSWLQEYWMAILPFLVVIIATVYYLSLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_00703614;
80% Identity
-