Basic Information

Insect: Eupithecia subumbrata
Gene Symbol: -
Assembly: GCA_949316285.1
Location: OX438650.1:15831058-15839557[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.024 2 9.9 2.0 1 23 195 218 195 218 0.93

2 29 0.00076 0.065 14.6 0.8 2 22 253 273 252 273 0.93

3 29 0.00015 0.013 16.8 0.3 2 23 308 330 308 330 0.97

4 29 0.0003 0.025 15.9 1.3 1 23 378 401 378 401 0.97

5 29 0.022 1.8 10.1 0.1 1 23 435 457 435 457 0.96

6 29 0.00026 0.023 16.1 1.5 2 23 504 525 503 525 0.96

7 29 0.00024 0.021 16.2 2.0 2 23 575 597 575 597 0.97

8 29 0.00025 0.021 16.2 1.3 1 23 647 670 647 670 0.97

9 29 0.00034 0.029 15.7 0.1 1 23 725 747 725 747 0.97

10 29 0.001 0.087 14.2 7.1 1 23 758 780 758 780 0.98

11 29 0.044 3.8 9.1 1.1 2 23 792 813 791 813 0.96

12 29 0.0039 0.33 12.4 1.0 1 23 823 845 823 845 0.98

13 29 1.5 1.3e+02 4.2 4.1 1 21 874 894 874 896 0.86

14 29 0.0014 0.12 13.8 5.6 1 23 907 929 907 929 0.98

15 29 0.0021 0.18 13.2 1.2 1 23 937 959 937 959 0.96

16 29 5.7e-05 0.0049 18.2 0.5 2 23 979 1001 978 1001 0.97

17 29 0.013 1.1 10.8 2.6 1 23 1019 1041 1019 1041 0.98

18 29 0.23 20 6.8 0.6 2 23 1082 1104 1081 1104 0.90

19 29 0.0038 0.33 12.4 0.2 2 23 1127 1148 1126 1148 0.95

20 29 1.8 1.6e+02 4.0 0.3 2 20 1152 1170 1151 1171 0.85

21 29 0.3 25 6.5 1.1 2 23 1191 1213 1190 1213 0.95

22 29 0.047 4 9.0 0.6 2 23 1229 1250 1228 1250 0.91

23 29 0.53 45 5.7 4.6 5 23 1260 1278 1258 1278 0.94

24 29 0.00037 0.032 15.6 1.9 1 23 1288 1311 1288 1311 0.96

25 29 9.3 7.9e+02 1.8 4.9 2 23 1328 1346 1328 1346 0.78

26 29 1.8 1.6e+02 4.0 1.6 2 20 1350 1368 1349 1370 0.92

27 29 0.21 18 6.9 2.2 2 23 1418 1439 1417 1439 0.94

28 29 0.013 1.1 10.8 0.6 2 23 1450 1472 1449 1472 0.96

29 29 0.066 5.6 8.5 2.6 2 21 1510 1529 1509 1530 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.024	2	9.9	2.0	1	23	195	218	195	218	0.93
2	29	0.00076	0.065	14.6	0.8	2	22	253	273	252	273	0.93
3	29	0.00015	0.013	16.8	0.3	2	23	308	330	308	330	0.97
4	29	0.0003	0.025	15.9	1.3	1	23	378	401	378	401	0.97
5	29	0.022	1.8	10.1	0.1	1	23	435	457	435	457	0.96
6	29	0.00026	0.023	16.1	1.5	2	23	504	525	503	525	0.96
7	29	0.00024	0.021	16.2	2.0	2	23	575	597	575	597	0.97
8	29	0.00025	0.021	16.2	1.3	1	23	647	670	647	670	0.97
9	29	0.00034	0.029	15.7	0.1	1	23	725	747	725	747	0.97
10	29	0.001	0.087	14.2	7.1	1	23	758	780	758	780	0.98
11	29	0.044	3.8	9.1	1.1	2	23	792	813	791	813	0.96
12	29	0.0039	0.33	12.4	1.0	1	23	823	845	823	845	0.98
13	29	1.5	1.3e+02	4.2	4.1	1	21	874	894	874	896	0.86
14	29	0.0014	0.12	13.8	5.6	1	23	907	929	907	929	0.98
15	29	0.0021	0.18	13.2	1.2	1	23	937	959	937	959	0.96
16	29	5.7e-05	0.0049	18.2	0.5	2	23	979	1001	978	1001	0.97
17	29	0.013	1.1	10.8	2.6	1	23	1019	1041	1019	1041	0.98
18	29	0.23	20	6.8	0.6	2	23	1082	1104	1081	1104	0.90
19	29	0.0038	0.33	12.4	0.2	2	23	1127	1148	1126	1148	0.95
20	29	1.8	1.6e+02	4.0	0.3	2	20	1152	1170	1151	1171	0.85
21	29	0.3	25	6.5	1.1	2	23	1191	1213	1190	1213	0.95
22	29	0.047	4	9.0	0.6	2	23	1229	1250	1228	1250	0.91
23	29	0.53	45	5.7	4.6	5	23	1260	1278	1258	1278	0.94
24	29	0.00037	0.032	15.6	1.9	1	23	1288	1311	1288	1311	0.96
25	29	9.3	7.9e+02	1.8	4.9	2	23	1328	1346	1328	1346	0.78
26	29	1.8	1.6e+02	4.0	1.6	2	20	1350	1368	1349	1370	0.92
27	29	0.21	18	6.9	2.2	2	23	1418	1439	1417	1439	0.94
28	29	0.013	1.1	10.8	0.6	2	23	1450	1472	1449	1472	0.96
29	29	0.066	5.6	8.5	2.6	2	21	1510	1529	1509	1530	0.95

Sequence Information

Coding Sequence: atggccctcaAACTTGGAAAATGTAGGCTTTGCCTCAAACTCGGGGACTTCTTCTCCATCTTCGCCTCGGATAACGATGTCCAGCTATCTGAGATGGTCATGGCATGTTCCAGGATAAAGgTATATGATGGAGACGGACTTCCAGATAAAGTGTGTTCTGATTGCGTACAAAAGCTTAGCAGTGCCTACATATTTAAGCAGCAATGTGAGAGGTCTGATCAAGAACTACGGCGAAACTATGTTCCACCCCCAGGTTTTAGTATCACTCCACCCCCACCAACAAATCGAGAAAGCAGCGACTCTGCCTTTTCAACGCTCACAGACAGCTCGAACCTAAAGTCATCTTTCTCTGAAAATAAAGTAACACCTGCTAGTAGAGGCAGAAAACGAAGCGTTGAGAGTGATGTGTCAATTGGTAGCCGGTCCCAAGAACGGCCAGGTAGCTCCAAACGTGTAGAAGAACTCAAAAAGGCACAAAAACCGAAGCGACCGCGCTACTCCGTCGACTCTGATTACGAAGATAACGGAGCTTCTAGTATTGTCAATGAAACGGACTCAGACGAACCACTCCTCAAAAACGAGCACACATGCCCCCTCTGCCCTAAGACCTTCAAATGGTTGAAAAGTATGAAGATTCACATGGCTCATATACACACAGGAAAGAAAGCCAACTCAAGAGCCCCAGAACAGAATGTCAATATTCCTATAAAGAAAGCAAACAAAAAAGATCTACCAGAAAGTGAAGATGAACAGATAAGCTGTGACAAATGTGATAAGAAATTCAAACTGAAAATCATGCTGAAGCGTCACCAAGAAACTTGTCAAAAGTCACCTGCAAAGGTCGCCTCCACGTCTCCTATGAAGGAGCTGATGATCACGCTTGAGCCGATAGACGCCGTGCCGCAGCGCCCCAAGAAACCCACGTGCGAATATTGCACGGCGCAATTCAAAACTGTCGACAACTTGGAGAAGCACCTGAGAGTGGTCCATGCAGCGACGCGGAAAAAAACAAACAGCGAAACTAAGCAAGGGGGAACGCTGATATGCCTCTATTGCAGTAAAGAGTATGAAGATTACTACGTGTACAGTTCCCATTTCAATGGCTGTCCGATGAAAGAGAACTTTTCCGTTTACCAATGTCCCATGTGTCCGAAAAGCTGCAGTCGCCTCACTGCTTACGTGAGCCACGTGAGGAACTCTCACGGCCACTATCATGGGCATGGCATGGGCAGCGCTGCCAGCACCAGCCCGAAGGTAGAGCCGGAGCTCCGATTGTCCGCGGCGAGCCCGGCCGCGGCGGCCTTCGAGTGCCGCATGTGCAGCAAGAAGCTGGCAACACAGGCGCTGCTGATCGAGCACTTGGCCGCGCACATGTCCACGAGTGTCACGAATGTCGACGAGGACGACACGATCGCAGACGACTTTGATTCAAGAGATGCCACTGTAGCCGACGATTCGATGTCGGTCCATTCAGCGCAGAGCTCGCAAGCATCTCAATCGGGCCCCATTAAATGCCGCTATTGCGATAAAGAGTTCACCTACAAAAAGTCTCTTGCGTCGCACGAGCTGAAGCACGCCGAGGAGAATGTGACCGTGAAGCACGAGCCTCCTGACAAAGCGCCGCACGCCGACCTGCTTGCGGAGAAACACGATGTCGCGGACACTGCCAACAACCAGGAATATGATTCCGAATCTAGTCAAGACGAGGGAGAGGAAGATAACACGTGTGATATATGCGAGAAACAGTTCTCCTACAAACGGCTGCTAATACAACACAAGCGAACGAAACACACAATGGTGGCGGGGATGAAGCGAGCCAAAATAAGCCTGAAAGATTGCTCAGTAAGGTGTCTGATTTGTGAAGAGGAAATGAAAGTCAGTGTCATCAATGAGCACAATCAGAAGCACATCTCTGTGAATATACGGCCGAGGAACATCTACACTTGCGCGGAGTGTGCTCAGAAGTTCAAGAGTTGCAGCAATCTGGCCAATCACATTAAACTAGTGCACAGGTTGAAACAACAAGAGGTGCCAAAGCAGTTTGCCGGCGTAGACATGGCGGATTTTTGTGAGGTCGTTGTGACGAAAGCGGAACCTCTGGATGAATCCCAGAGTCACAACGGCTTTGGAGAGGTTCCGCAGAACGCAGCGCCAGTGGTTAACCTGACCGGGTTCACTTGCCCTATTTGTGGCAAGAAAATGCCGACGCTAGTGTCCCTCAAACGGCACGTCAATTGGCACTCCTTTGTGGGGAACAATCTGGAGTCGAAGCACGAATGTTTCGTGTGTAAAGAGACATTCAAGTTCAAAGGTCACTTCAAGATCCACATGCGCAAGCACTACAGGGACCCCAACATCGACGCATCCTTCCTCACGTGCAACATCTGCCAGCGCCGCAGCAAGCATCTCCGCGCGGCCCAGGCGCACATGAACTGGCACAAGCAGACCCGCTTCCAGACTAAAGACTACCAGTGCTCAATATGCAAGCGAGTCTTCCAGTACAGGAAGGTATATCTCTCACACATGGCCGTCCATTACAAGAAGGGCGAGAGCGGACAGAACACGGTGGTCGGCGATATGGTCCCGAACAACCTTGATAAAGCTAAGTATGACGGCACCTTCACCTGCCAGCTCTGCGGGAAGGTCTGCGACTCTGAAAACTCTTTAAAATGTCACTCCAGCTGGCACAGGTCCAAGACGCTGCTGTACGGAGCGCGCCACGAGTGCCAAATGTGCAATCTCCAATTCACGAACAAGCGTCATTTAGAGCTCCACACGCGCTCCCATTATGAGGATCCCAACGGTGAGTTCAAGTGCAATATTTGCGGCAAGGGCTTCATAGATGAGGAGTATCACAGGAGACACGTCAAGGGACACAACTTCGATCACCAATCTCACAAGAAGCGAATAGAGAAGCTGAGGAAAGGGAAGGTGAAGTGTCCGATCTGCGACCGGTACTATCCGGATCTGGTGCACCTGATCCGCCATCTCCGCCGCACGCACCCCGAGAGCAAGATGATCAAGGAGGACCCCGACGCACCGCCGCCTAAGTACTACAGCTGCAAGCTCTGCGCTAAGTCCTTCTACGACGAGAAACGGTTCAAGAGCCACCAGGAGTCGCATCTCCGCAAGCCCTGCTTCATAAAGTGCAAATTCTGCGGATACAAAAGTATATCGATGAAGAATCATCACCTACACATCAAGCAGAAGCACATGACGAAGAAGTACGTCGAGAATCCGCTGAAGTGTCCGCGGTGTGACGAAGTTTTTGTGTGGGGCTACGCGTTACACCACCATTTGCGCGACGAGCACGGCGTGCAGGAGGACTGGGTGGCGGAGCGCGACGACGCGGCGCTAGAAGGACCACTCAAAGACTTGCAGTGCTCCATCTGCCTCAAGGTCCTCGCCAGCAAGGGCAACTTTGAGCGGCATCTCGACTACCACAACACTTTACGCTGCAACTACTGCTTCGAGTACTTCAGCACGCTGCGTTTCCTCGACGGACACCTCGCTTTCACCTGTGACAAGAAAAACCTCGTCGGTGACACTGATCCCTATCCTAAACGCGTCAAGTGCGAGATCTGCTACAAGGCTTTCGCGTTACAAGTGAAGCTGGACTGCCACCTGCGGACCCAGCACGACATCAAGGTGCAGCGCGACCCGCACGCCGGCAGGCAGGAGCTCGTCTGCGACTACTGCTTCAAAGTATTCGAGAACGAGCACGCGCTCAGCGGGCACAAGGTCTACCACCGCACCATCGGCTACTTCGGCTGCATCTACTGCGAGCGCAAGTTCAACACACAGACCGCCTTCCGTAAACACAAGAACCACCACTTCACCGTTCACAACGTCGAGGAACCCTTTAAGTGCGAGCACTGCGACGAGACGTTTGTCCAGTTCCGGGAGATGATCTACCACATGCGCGACGACCACGGCGACGACAAGGAATGGATCGTGATGCCCAAGGAGTCTATAGAGGAGACCTGCTCTATCTGCCATAAGACCTTCTTCAACATCCACCGGCACATGGACTACCACGAGGAGAACAAGTGCAAGAAGTGTAACGAGTACTTCTATTCCACCGTGGATTATGACAACCATCTGTGCGCTATAGAGAGCGATGCGGAGGAGGCGCCGGGAGTTCCGCGCTCCGACGTCCCCTACCAGGAGTGCACCTTCTGCTTCAAGCCGATCACCAAGAAGGACTCCAAGAAGAAGCACGACATGCTCCACCGCACCTCGGGAGCGATCTCCTGCAGGTTCTGTCATCTCAAGTTCAAAACGCTCGACGCTTTCAACATCCACGCTTTCTCGCACCGCAGCCGCAAGTATACCAAGAAGCCGCTAAAATGCCGCGTCTGCAAGGAACGTTTCATCAAGTACGGGCCGTTTATGAAACACATGAAGGTGGTCCACAAATGCGTTAAGAAGAGCCACTACCGCGCGCTGGTCAAACCCGAACGTTGCGTCATCTGCGGGGAGTTTCTACCCAATCTGCACAACCACTACCGCGCTCACCTTGCCAACCAGTGCCAGTTCTGCAACAAATACTTCATCTCCTCACGTCTCTTCGCGCGGCACCAGTGCGATGTCATCGATGAGGACTCTACCAAAGTCTTCACATCCGACGAAAACATCCAAGCGCTCATCTACTCTTACATGCCTAAAGACTTGAAGGACGATGAGAAGTTCTACGGCTACACAGACGACGAAGAGGAGGTTGAACCTGAAATTTCTCCAGCGATCACCGCAGAGCAGGATAAAAAGCTTAAGAAGGCGATGAACGGGCCGACTAAACGCAAACCGAAGCCGAAACGGCTGACCCAGGAGGCGGAGTACGAGAGGGATCTCCACATGATGGTGCAGTCCCCGATCATATCGGATGTTCTGTCGCTGTACCAGAACGACGACGCTACTGGCGCAAGCTCTCAAACGTTTTTGGGAGAGATTGTTTCTCTCACTGACGAAGATTCGATGGACGTGAATGATGTTGCACCTCCCATTGTCATTATAGACGACGATTAG
Protein Sequence: MALKLGKCRLCLKLGDFFSIFASDNDVQLSEMVMACSRIKVYDGDGLPDKVCSDCVQKLSSAYIFKQQCERSDQELRRNYVPPPGFSITPPPPTNRESSDSAFSTLTDSSNLKSSFSENKVTPASRGRKRSVESDVSIGSRSQERPGSSKRVEELKKAQKPKRPRYSVDSDYEDNGASSIVNETDSDEPLLKNEHTCPLCPKTFKWLKSMKIHMAHIHTGKKANSRAPEQNVNIPIKKANKKDLPESEDEQISCDKCDKKFKLKIMLKRHQETCQKSPAKVASTSPMKELMITLEPIDAVPQRPKKPTCEYCTAQFKTVDNLEKHLRVVHAATRKKTNSETKQGGTLICLYCSKEYEDYYVYSSHFNGCPMKENFSVYQCPMCPKSCSRLTAYVSHVRNSHGHYHGHGMGSAASTSPKVEPELRLSAASPAAAAFECRMCSKKLATQALLIEHLAAHMSTSVTNVDEDDTIADDFDSRDATVADDSMSVHSAQSSQASQSGPIKCRYCDKEFTYKKSLASHELKHAEENVTVKHEPPDKAPHADLLAEKHDVADTANNQEYDSESSQDEGEEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSVINEHNQKHISVNIRPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQQEVPKQFAGVDMADFCEVVVTKAEPLDESQSHNGFGEVPQNAAPVVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLESKHECFVCKETFKFKGHFKIHMRKHYRDPNIDASFLTCNICQRRSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRKVYLSHMAVHYKKGESGQNTVVGDMVPNNLDKAKYDGTFTCQLCGKVCDSENSLKCHSSWHRSKTLLYGARHECQMCNLQFTNKRHLELHTRSHYEDPNGEFKCNICGKGFIDEEYHRRHVKGHNFDHQSHKKRIEKLRKGKVKCPICDRYYPDLVHLIRHLRRTHPESKMIKEDPDAPPPKYYSCKLCAKSFYDEKRFKSHQESHLRKPCFIKCKFCGYKSISMKNHHLHIKQKHMTKKYVENPLKCPRCDEVFVWGYALHHHLRDEHGVQEDWVAERDDAALEGPLKDLQCSICLKVLASKGNFERHLDYHNTLRCNYCFEYFSTLRFLDGHLAFTCDKKNLVGDTDPYPKRVKCEICYKAFALQVKLDCHLRTQHDIKVQRDPHAGRQELVCDYCFKVFENEHALSGHKVYHRTIGYFGCIYCERKFNTQTAFRKHKNHHFTVHNVEEPFKCEHCDETFVQFREMIYHMRDDHGDDKEWIVMPKESIEETCSICHKTFFNIHRHMDYHEENKCKKCNEYFYSTVDYDNHLCAIESDAEEAPGVPRSDVPYQECTFCFKPITKKDSKKKHDMLHRTSGAISCRFCHLKFKTLDAFNIHAFSHRSRKYTKKPLKCRVCKERFIKYGPFMKHMKVVHKCVKKSHYRALVKPERCVICGEFLPNLHNHYRAHLANQCQFCNKYFISSRLFARHQCDVIDEDSTKVFTSDENIQALIYSYMPKDLKDDEKFYGYTDDEEEVEPEISPAITAEQDKKLKKAMNGPTKRKPKPKRLTQEAEYERDLHMMVQSPIISDVLSLYQNDDATGASSQTFLGEIVSLTDEDSMDVNDVAPPIVIIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_00698519;
80% Identity: -