Esub023218.2
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- -
- Assembly
- GCA_949316285.1
- Location
- OX438646.1:12501313-12511347[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.017 1.4 10.4 1.5 3 23 654 675 653 675 0.92 2 24 6.5 5.6e+02 2.3 1.1 4 21 1045 1062 1043 1063 0.87 3 24 0.15 12 7.4 1.4 1 21 1071 1091 1071 1092 0.96 4 24 8.8 7.5e+02 1.9 0.4 1 23 1132 1155 1132 1155 0.90 5 24 0.00031 0.026 15.9 0.9 3 21 1166 1184 1166 1185 0.96 6 24 0.39 33 6.1 0.5 2 23 1193 1215 1192 1215 0.93 7 24 0.023 1.9 10.0 0.8 3 23 1234 1255 1232 1255 0.92 8 24 0.00053 0.045 15.1 0.5 1 23 1260 1283 1260 1283 0.93 9 24 0.1 8.5 8.0 0.0 1 23 1309 1332 1309 1332 0.91 10 24 0.023 2 9.9 3.4 1 23 1337 1359 1337 1359 0.97 11 24 0.018 1.6 10.3 0.2 1 23 1365 1388 1365 1388 0.95 12 24 0.014 1.2 10.7 1.0 1 23 1401 1423 1401 1423 0.97 13 24 0.00022 0.019 16.3 1.8 1 23 1479 1502 1479 1502 0.97 14 24 0.00019 0.016 16.5 1.4 1 23 1554 1577 1554 1577 0.95 15 24 0.0022 0.18 13.2 1.4 2 23 1602 1624 1601 1624 0.95 16 24 0.025 2.1 9.9 0.1 2 23 1630 1652 1629 1652 0.94 17 24 0.11 9.8 7.8 0.9 1 23 1695 1718 1695 1718 0.95 18 24 0.0015 0.13 13.7 0.6 1 23 1726 1748 1726 1748 0.93 19 24 0.00013 0.012 17.0 0.4 2 23 1835 1857 1834 1857 0.93 20 24 4.1e-07 3.5e-05 24.9 1.4 3 23 1864 1884 1863 1884 0.98 21 24 0.0042 0.36 12.3 0.2 1 23 1903 1925 1903 1926 0.95 22 24 0.43 37 6.0 0.0 1 23 1949 1971 1949 1971 0.97 23 24 0.034 2.9 9.4 0.6 1 23 1977 2000 1977 2000 0.95 24 24 0.00048 0.041 15.3 0.5 1 23 2008 2031 2008 2031 0.96
Sequence Information
- Coding Sequence
- ATGACTGTGAACTATGATCGTGTTTGTAGACTGTGCATGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGAGTTGGAACCTCCCATCCTCGCATCAAAAATTAAGGATTGTGTGTCTGTAGAGATAAACGAAAATGACGAGCTGCCGACGAACATCTGCAGGAAATGCGTGGATAATGTCAACAACTGGCATATATTCAAGACTGTATGTGCAAAGACACAAAACAAACTACTGTCTCTCACAAGAAAGGATGGAAGCCTACTAGAAGAGGTGCAAGTAAAAAATGAGCCTTTTTCTGATGAGGCTTATGATGATGGAGTGGTCATTGATGGATTATACCCTGAGAATGAGcAAGCGGCCGCTTCAAAGCTGCAGCCAGAAGGTCCCCCGATCCTGGCCTCGTTGGGACTTACTCCACGGAGTGATAAGAATTATGTTGACCCACGAATGGATTGGCAACGAGTTCATGCCATATTGGGTATGATTCAAGAGAATGATGTTATCGACTCGCTCCAATCCTTCGAAGAGAGTGATGAGTTGCACCATTCCGATCATGAGTCAGACTCGGAGGCAGAGCTCCAACCGAACATAGATGATATCTACACCGACTGTAAAATGGGCTACATTTGCAGAAACAAGAATATTCTGAACCAAAGGCCGTTCGACATTTCATACCTCAAAGTAAATACTGTAAAAGTGAAAAAGCGCAGACATGATATTCATAAACACGTTGGTACCCCCAAAAGTGCATGGCACCTACTGTTTACAGAAGACCTTCTTGATCTCATTGTGTCCGCAAcaaatgaaaacattctcaggCACAGCAAAGTATTTGATGGCTGCACTAGTGTCGGTGAAGTCAAGAGTCTTATTGGAATTTTGTACCTGAACGGTATAATGCGGCCAACTCATCAGAAATGCAGTGACCTCTGGGACAAAGACGTTGGCGTCCCGGCCGTTATAAACGCAATGACAAACGAACGCTTCAACTTTCTCTTACAAAACCTCTGTTTCCATAGCCAAGATGATGATAACAGCATTATGCAGTACGATACAATGAAGCGAATACGCAAATTGTTTGAGATATTCGTGATGAACTGCAGAAGTACATTCGACGTGCAGAGTACAGCGGTCGTTGATGAGATCATTGTGCCAGTTTTCGGACCTTGCCCGTTTCGATACGACATCGATAAGAAACCATTGAAACGTGGAATCAAAATAGTGCTGCTGGTCGATCCAAGTAATTTCTACGTGAGCAATCTGGATGTGATCACAGATCCGTATTTCGCAGGCGACGAGATCGTGAAAAAGATCACTCAACATTTGTACGGTAGTGGAAAAACTATAATTATGGACAGCTGGTATTTTTCCACTGGCTTGATGGAAAGCCTTAAAAATTCTAAACTGTATACCATGGCGGCCCTGCATCCGAAAAGCGAAGGAATACCTCCACTGTTTATATCGCAGCACAGAAAAACTTGCACGTACACTTCTGGATTTGGCGACGAGTTCTCGCTGACTTCTTACATAAACGCGCAGTCGAAAGCGATCAACGTCATTACAAACCTGCCCCAGTTCAATAAGAAAGGTCACACGAACCGCACGACATCAGTATCAGCTTACAAAAAAGACCAATCGGCTGTGGAGGTCCTGGATGTGTTAATGCATTACTATACAACATTGCAAAATACAAACGATTGGACGTTATCGCTGTTCTTTACATTGTTGAATATTGCATCAGTAAATGCTCAAGTTGTATGGAGTACCCAGGCTTCCACGGGAACGGAGAGTGATAAAGACGAAGATGAAGATTATGAAGATTTAAAAATCCCGCAGCCTGTGAAGGTGCCCCACATGCCTGAGGTGTCCATCACCGTGATGCGCCCCACGGGAGAAACCCTACAGTCGCGACAAGGTATCCAACAAATTGCCTCTAAAGACTGTCTAATCTGCGGCCGCAGCTACCGGTACTCACACAACGCGAGACGACATGAACTCAACACACACAAATTCGACCGCTACACAAACAGAATAAACAAACCGAAATCGCAGACTCGTATGCAACCAAAACTCCGACCAAACCCTTTTAACCCGAAAGCACGTCTCATGCCTAATCCTATTAGCCACAAAATGCAATTAGTACCAAAAATGTCTCCGAAATTCATGCCGCAGCAGCATAGTCTTCAGTTCCATAGGAAAATAATAACTCCACCGAAACCAATACCTATAAAATCTGCAAAATCACAACAAAACAATTTACCCTATCCGTTGCGTATCAAAGCTCTCAAAGATTTGCAGATAAAGAAAAAAGAACCacagattttaaaaactttgcTCACCGCTAAGCCTGAGGTTTTGGTCTCGGAACCAGAAATAATGAATTCTGGCCCCGAGAGCCCGGAGACTTTGATTTCTGAACCTGAAATAGCGTCGTTCCAAGTTGAAACTATTCTCTCAGAGCCCAATGATTATGATGAAAATCAAGACGAAGATGAGGGTGATGCTGAAATGCACAACCATCAGAGTCAAAATTATGACACTGTCGATATGGATTCTGAAAATGAAATAGAAATTGCTCGACAGCAAGAAAGTGCGGAAGATAACGAAGAAAATGCGAATGAAGATGAAAATATCCAGCAAGAAGACgataataattttgatgacGCTGACAAAGAGGATGAAAATGATAGTGATAAAGCGAGCCCCCAAGATGTAACTCAAGCTGGAACTGAAGATGACAGTCAAAATATGGTTATCGATGAAAATAGTGAAACTAAAGAAGACGAACCAAACAATGAAGAAGAAGATGAAGAAGGCAACGATGAagctgataatgatgaattaGACGCCAGTCAGGCTGAACGAAACGAGGATGATGAGGAAATTCTCGGACTTACGCCTCAAATTGAGTTGAACGAAGAAATGCAAAACAACTCTACCATCAACAGTGAGATGAATGACGAAGAAGAACCGGACGAAACCGCTGAGTTCAACGATACAGTCGACGGCGAAGCTGACGAGCCAAACGCTCCGCAAGGCTTCGTCACCAGCACTCAGAGAGACTTTATCAAAAGATATCGTGATATCATCCTGCAGATCAACACCCAGAGATGCCTGTGTTGCGACAAAGAATATCCGCGCAGAAAATCCGTGATTCAACATCTGCAGAAAAATGGATATAAAGTCCCAAAGCACACTTGCTATAATTGCGTCGTTACGTTCACGCACATTGGAGCACTGTTAAGTCATATGAGGCATAACAATTGCACTGATCTCTGGAAGATTATTTATGATGATAACGGAATCACCAGCGAAATGATAATCGAAGAGCCTAAGAGCAAAATACAAACCAAAGATATTTTCAATGCGAAATCGTATGCGTGTAGATTGTGCCCCGCCAAATTTCAACTAAAACAATCTATCATGAAACATGTTTCTGAGTTCCATGAGGACGGTCAGTCGTCGGTTCCTATGGGCTGCGTCCACTGCGGAGCATCTTTCAAAGATAAAACTTTACTCAAGAAACACATTCGCAATGGCGAATGTACTGTGTACATCCATTGTGATTTATGTTCAGAACAATTTACCAATATGCAAGAATTTAACGATCATGCTTTGTCTGCTCATGCTGAGCACTTTGTGAAGTCTGAAAACCAGAGTGTCGATGGACGACTCACAGATTGCTATCTATGTGGAACCAAGACTAGCAGCTATTCGAACTTGCTCAAACATTTTAAAGCGGAACATGATCAGATATCGCATCCTTGCCAATTTTGTGGAGTTAAATTTGAACAACCAGTCGATCTAAACAAACACATGTATCTGGAGCATCCTGGGCAAACTCCTGATTTGAACGCCACCCATCCTGACATGTCTCTTGTCAAGGAAGAAGCTGAAGAATACCACTACTCTTGCACCGAGTGTAATGCAATATTCGAAACTGTAGACGAATGGACTGATCACCAAGTGGCTGAGCATAACCAAGTGGCGCATCATTGCGACCAATGCGAAAAGAAATTCCTGCGACCTTCAGAGCTTGCAGAGCACAAGAATACCCACTTGAGAGTTAAATTCTATCCTTGCAGTGTTTGTTCAAACTCTTACAGCACCCCACAAAAGTTGGCTGATCACGTCCAGAACTCGCATCCTGGTGCCGGAACCAGTGCCAGCCCTGATCATGAATTTTTCTGCGAAATGTGTATTCGACCATTTAAAAGTCGCCAGGCCTATTCGAATCATATGCGTATTCATGCTAAAGTACCAACCACTAACAGAAAACCACAAACACCACAGGCACTCAAAGAGTTCGACCCACGTATAATTGGGAAACCCATCAAGCAGATTACTTTGTCAAATGTAGTTCAACCTTCAACTGTCTTCAACTTTAGGCCAAACGCAAATGTGCCTAATGCTCCTTATTCTTGTGACATTTGCGGCAAAGGTTTCATgcacaagaaaaatatttgGAAACACAAAAAAGTTTTGCATGCCGATATTATTAATGATAGAAACGATAGCGAAGAGAATACCATGCACGCCTCCACCGAAGAAGACGATTACAACGTCGATGAGAACGGCTCTATACTTTCAACGCCGCAATTTAATAGTTTCGCTTTTCCGGTGGAACCTTCGCCGAGCGTTCACGAATGTGAATTATGTGGAAAACAATTCCCTCTGAAGTCTAGTTTGATTAAGCACAAACGTGCCAAGCACGGAATTGTTAATACGAACCACGCTATTAAAACTGAATCACAAGCTTCACCTAGTGAAGGTAGTGGTCGGTCCAGTTGCACtatttgtaaaatttcattTGCGGACAAAAAATCTTATTACCGCCACAGAAAGAACGTCCACAAATCAGCTACGCAAATGTGCAAGATATGTGGTAAGCCGCTTAACTCGACGCAGGAGCTTTATGAACATCTGAAAGCGGCCCACGCTAGCTTGTTGCTCGGTTACGACGCCAACCAGAGTACGAGTAAGTCTCAGGATATTTCACAAGACATGGATCCTGAGTATGACGAACAAGAAATTGCTAATACAAATATTGAATACCAAGCGAGGTACCCATGTGATACATGTGGTAAACAATTTTTAGGATTACTGTCTTTGCAAAATCATCAGTGTGTAAGTCACCCTCCATCGCAACCTCAGACTTTCGACTGTGAAATTTGCCACAAAAGTTACACGTCGATCGCTGCGTTGAAGAGCCATCGTGGTTGGCATCTCCGATCCCCCGATGGCAAAGCGGCTGCTAACAATAGCGGTCTTTGGATGCCGCAGCATAAAGTTACCACTAAGGTTAGCAAGCACGAAGTTTTAGAAGCAACCCCGCCTCCAACAGGACGGTCGCAATCGACAGCTTCCGTAGCGAAAAGGAGACTCCCTCCCGAAGTGGAAGTGACCGTTGTGAACCCCAACAAAAAGATGCGCTCTGACGATTCTGTTGAGATGGAACAGCACGGTGACGCTGTAGAAGGCAAGTATTGTACGATATGTGACAAAGAGTTTACGAAACGCGCCGCATATCAACGGCACATGGACGAAGTGCACCAGCCGAACTCCGTGTTTTGTCCAGTCTGCGATAAAAGCTTCACGCGTAAATCGACTCTGCTCGTTCACATGAAGAAGCATTACGAAGATGGCGGAGAAGGTAGCTCCACAGCTCAAGTCGATGAAGATGAAGGTTTTCCGTGCGAAATCTGCGGTGCGCAGTATGATACCGAGAACGCTTTACGGGCGCACAAGATAAGGCATCACGCTGATGAGGAATCGGGTGATTCAGAGGATGACGGGGAGGTGCCGATGCCGGCGCAGCCTGGCGAGTTTACTTGCGGCCAGTGCGGCGACGGCGTGGCCACGGCGCGCGATCTGATCACGCATCGCGCGATACACTCAACGCATACTAAATTCTTCTGTAATATCTGCAAAGTGTACTTCGCCAGGGCATTGGATCTGTCATCGCACACGCGAGCGCGGCATGCAGACAATGAGAAAGTATTCTTCCCGTGTGCCATGTGTGATCGCTTCTACATGAACAAGAAAAGTTTACAGCGACACATCGATATGGTTCATTGA
- Protein Sequence
- MTVNYDRVCRLCMSSRGELLPIFPTTSSDELEPPILASKIKDCVSVEINENDELPTNICRKCVDNVNNWHIFKTVCAKTQNKLLSLTRKDGSLLEEVQVKNEPFSDEAYDDGVVIDGLYPENEQAAASKLQPEGPPILASLGLTPRSDKNYVDPRMDWQRVHAILGMIQENDVIDSLQSFEESDELHHSDHESDSEAELQPNIDDIYTDCKMGYICRNKNILNQRPFDISYLKVNTVKVKKRRHDIHKHVGTPKSAWHLLFTEDLLDLIVSATNENILRHSKVFDGCTSVGEVKSLIGILYLNGIMRPTHQKCSDLWDKDVGVPAVINAMTNERFNFLLQNLCFHSQDDDNSIMQYDTMKRIRKLFEIFVMNCRSTFDVQSTAVVDEIIVPVFGPCPFRYDIDKKPLKRGIKIVLLVDPSNFYVSNLDVITDPYFAGDEIVKKITQHLYGSGKTIIMDSWYFSTGLMESLKNSKLYTMAALHPKSEGIPPLFISQHRKTCTYTSGFGDEFSLTSYINAQSKAINVITNLPQFNKKGHTNRTTSVSAYKKDQSAVEVLDVLMHYYTTLQNTNDWTLSLFFTLLNIASVNAQVVWSTQASTGTESDKDEDEDYEDLKIPQPVKVPHMPEVSITVMRPTGETLQSRQGIQQIASKDCLICGRSYRYSHNARRHELNTHKFDRYTNRINKPKSQTRMQPKLRPNPFNPKARLMPNPISHKMQLVPKMSPKFMPQQHSLQFHRKIITPPKPIPIKSAKSQQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSGPESPETLISEPEIASFQVETILSEPNDYDENQDEDEGDAEMHNHQSQNYDTVDMDSENEIEIARQQESAEDNEENANEDENIQQEDDNNFDDADKEDENDSDKASPQDVTQAGTEDDSQNMVIDENSETKEDEPNNEEEDEEGNDEADNDELDASQAERNEDDEEILGLTPQIELNEEMQNNSTINSEMNDEEEPDETAEFNDTVDGEADEPNAPQGFVTSTQRDFIKRYRDIILQINTQRCLCCDKEYPRRKSVIQHLQKNGYKVPKHTCYNCVVTFTHIGALLSHMRHNNCTDLWKIIYDDNGITSEMIIEEPKSKIQTKDIFNAKSYACRLCPAKFQLKQSIMKHVSEFHEDGQSSVPMGCVHCGASFKDKTLLKKHIRNGECTVYIHCDLCSEQFTNMQEFNDHALSAHAEHFVKSENQSVDGRLTDCYLCGTKTSSYSNLLKHFKAEHDQISHPCQFCGVKFEQPVDLNKHMYLEHPGQTPDLNATHPDMSLVKEEAEEYHYSCTECNAIFETVDEWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLADHVQNSHPGAGTSASPDHEFFCEMCIRPFKSRQAYSNHMRIHAKVPTTNRKPQTPQALKEFDPRIIGKPIKQITLSNVVQPSTVFNFRPNANVPNAPYSCDICGKGFMHKKNIWKHKKVLHADIINDRNDSEENTMHASTEEDDYNVDENGSILSTPQFNSFAFPVEPSPSVHECELCGKQFPLKSSLIKHKRAKHGIVNTNHAIKTESQASPSEGSGRSSCTICKISFADKKSYYRHRKNVHKSATQMCKICGKPLNSTQELYEHLKAAHASLLLGYDANQSTSKSQDISQDMDPEYDEQEIANTNIEYQARYPCDTCGKQFLGLLSLQNHQCVSHPPSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTTKVSKHEVLEATPPPTGRSQSTASVAKRRLPPEVEVTVVNPNKKMRSDDSVEMEQHGDAVEGKYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYEDGGEGSSTAQVDEDEGFPCEICGAQYDTENALRAHKIRHHADEESGDSEDDGEVPMPAQPGEFTCGQCGDGVATARDLITHRAIHSTHTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIDMVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698511;
- 90% Identity
- iTF_00705293;
- 80% Identity
- -