Esub000560.2
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- Rel
- Assembly
- GCA_949316285.1
- Location
- OX438627.1:8577344-8578947[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-18 1.8e-14 55.0 0.1 3 74 65 134 63 151 0.88 2 2 0.23 1.4e+03 0.1 0.1 7 28 144 165 139 169 0.85
Sequence Information
- Coding Sequence
- ATGTCTTCGTGCAGTGCAAGTGAACGTGAAACCAGCGAAGGGTCGAGCTCTCCTATTTCCTACACGTTGAAAGAGTCTCCTTATAGTTCTCCTTCGCAGCAAGTGCCTCAACTAACCAATAACTTAACGGAATTAAGATGCTCAGACCGGAGTTTTCCTTTCATCAACAATGGGAGTCAACCGCAGCTTTGCCTGATCGAGCAGGCTCAGAATCACTTCAGGTTTCGCTATGTCAGCGAGATGGTGGGAACTCACGGCTGTTTACTTGGTGCCACTACTGGCAAAACGAAAACACATCCAACTGTTGAGTTGTTAAACTACTCTGGACGCGCACTCATACGTTGCCGGCTGGCACAATGTGACTCTGATGAAGAGCATCCTCACAGGCTCCTGGAGGATGACCAGGACAGAGATGTCACTTTCTATGTACCTCAGCATAACAGCTACAGGGTTAGGTATGTATCTACATCATACAGTACTAACTCATTCAGGGGATACCTACAACTGTCCAActattag
- Protein Sequence
- MSSCSASERETSEGSSSPISYTLKESPYSSPSQQVPQLTNNLTELRCSDRSFPFINNGSQPQLCLIEQAQNHFRFRYVSEMVGTHGCLLGATTGKTKTHPTVELLNYSGRALIRCRLAQCDSDEEHPHRLLEDDQDRDVTFYVPQHNSYRVRYVSTSYSTNSFRGYLQLSNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700774;
- 90% Identity
- iTF_00700774;
- 80% Identity
- -