Basic Information

Gene Symbol
stc
Assembly
GCA_963564075.1
Location
OY751102.1:14856125-14874204[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 2 3.2e+04 -4.4 1.6 15 19 570 574 569 574 0.81
2 14 0.13 2.1e+03 -0.3 0.6 4 10 603 609 602 609 0.93
3 14 4e-05 0.64 10.9 18.1 4 19 617 632 615 632 0.93
4 14 8.5e-05 1.4 9.9 8.9 1 18 668 685 668 686 0.92
5 14 2.7e-05 0.43 11.5 15.0 1 19 727 745 727 745 0.99
6 14 1.6e-05 0.27 12.1 9.9 1 19 786 808 786 808 0.88
7 14 2 3.2e+04 -5.4 2.2 6 10 838 842 838 842 0.94
8 14 0.0039 63 4.6 7.0 1 12 848 859 848 859 0.94
9 14 0.096 1.6e+03 0.1 1.1 4 10 863 869 862 869 0.92
10 14 4.1e-09 6.6e-05 23.7 16.2 1 19 875 893 875 893 0.97
11 14 2 3.2e+04 -4.1 2.5 11 16 922 927 921 933 0.69
12 14 0.0011 17 6.4 10.2 10 18 940 948 936 949 0.92
13 14 1.6e-07 0.0026 18.6 13.8 1 17 985 1003 985 1009 0.83
14 14 0.0022 36 5.3 4.8 1 12 1015 1025 1015 1026 0.96

Sequence Information

Coding Sequence
ATGTCTCAGTGGAACAACTCATACGCTTATAACAACCAGTATCAACAAGGCTCCAATGGCTGGAACGGCGACCCTGGTAACCAACACATGAATCAAGCTTATTACAATAGGCCAGATGCCAATGGTCAATATGTGAGTTTCAATGAATTTCTAAATCAAATGCAAAACAGCAATACTGCTCCTCACACTAACAATCAATTACCTAACTCCTTCAGCAATGTTCAATATGATAACTATTCCTCTGGTCAATATAACTACATGCCTTCTTCATCCCAGACACAGCTCAACAATGTGAACTATGGAACATCCAATGAAGCCGCCCCCTACCCACAGAGCCAGTTCAGTGCCCCACCACCAGAACCAACTTACTCTAACAATGCCACATTCAAATCTAACCTTACAGCCACTGCATTAGAATTTGTTCCTAAAGGTTCTCTTCCAAGACCTTCCAGAAGCAAGAACATTCCAGACTCTTCCAATAGTTCCAAGGATATAAGTGATGATGCTAATGAAGCCCAATCCAATTATGGTAGCTCATCAGATCGAAACTGGAGGCAGAGGCCACTAAAATCTACTGAACCAAAGGACAAACCAATGTCTAATGTGCAACAAGATAACAGTAAGGGCTATGGGCGCAACCGTGATACTTCACAACGAAACAATGAAAGTAATGGTAGACATAACAGAAATGAAGACACCAGTACAGAAGTAAGCACTCGTAGCACTGAACCTGATAACAGAAATCAAGAACCAAATCAACAGAGCTATGAATCAAACAATGTGAGTCAAGAACCACGACAAAGAAACTATGATTCTAACAACAGAAATCAAGAACCACATTCAAATAGGAATCAAGAACCTAGGAAAAGAAATAATGATAGAAACCAAGATACTAGGAAAAACAATGATTCCAGTAGTAGAAACAGAGATTCTTTGAATTACAATTCTAACGACAGGGGCCAAGAATCAAGGGAGTTAGATTCAAATCGCTATGACTCTCGTAATGAACGTCGTAACCAATCAAAGGGCAActctaaaaataaagttaaagaTGAGAGAACTTTCTACAATAGTGGTATAAGTAAAGATGGTCAAGATGTCAGGGGTGGTCGTGGAGAAAACTCTGGAAGGAGTGATGATAGAAACCGAGACAGTGATGGCTGGCCAGATGGTGCTAGAGATAATTATAGACGAGGGGAGGCTTCCAGGGGTGATAGCTATGGCTCTAGAGATAATTATGGAAGGGCTGAAGGTTCTGGACGGTTGCAAAGAAACTGGGCTGGTACCCAGCGACCACGAGGGGACAGGAGGGAAGATGATGAACAATATGCTAATAGCTACCATCAAAAGGAGGAACGAGAAAGAAGAGTAAATGAGAGAACAGAAAGAGCATATGATAGGGGAGAAAGAGACAAGGGATATGACAGAGACAGGGGATTTGATAGACAAGACAGAGATAAGCagaaaaatctgttcagtcctCCTAAATTTAAAAGCAAGCAACAGGTTGACTTTGCTAATACAGAGATGACTCAACGTGAACGTCTCACTGACCAACTAGATAAAGGAACCCTTGAGTGCCTTGTGTGCTGCGACAGAGTAAGACTGACAGACCCTGTGTGGTCCTGCTCTAACTGTTTTCATGTGCTTCATCTTAAATGTATCAGGAAGTGGGCTATGAGCAGTGTAATTGAGGGCAAATGGCGTTGTCCCGCCTGTCAGAACATTAGCAACAAAATCCCCACGGAGTACCGCTGTATGTGTGGCGCGATGCGTTCGCCTGACTACCAGCGAGGCAGCGCGGCGCATACCTGCGGCAAGGCGTGTAAGCGAGAACGGACCTGCCCGCATCCTTGCACGCTGCTCTGCCATCCAGGACCCTGTCCGCCGTGCCAGGCCACTGTTAGCAAACAATGCGGTTGCGGCGCCGAGACTCGTTCCGTAATGTGCAGCAGTAAATTACCGCAAGTCTGCGGCCGTACCTGCAGCCGCACTCTTCCTTGCAACGTGCACCAGTGCACCGCACTCTGCCACGAGGAAGCCTGCGCTCCCTGCGACAAGACTGTCGTGCAAGTATGCTATTGCGCAGCGGCCACGGAACGCACGGTCCTGTGCACCCGCGAAACCGGCAGCAAGACCCAGTGGGAGTGCGAGCGTGCGTGCGGACGCATACTGGCGTGCGGCGCGCACGTGTGTCGTGCGCCGTGCCACGCGCCGCCGTGCCAGCCATGCCCGCTGCTGCCGCAAGCCGTGCGTACGTGCCCGTGCGGGAAGATGCAactagacACGAACGCTCGCAAAACCTGCTCCGACCCGATTCCTTTCTGCGGAAGAATCTGTGCCAAGCCGCTGCCTTGCGGGCCCGCAAACGACAAACACTTCTGCAAGCTACCCTGTCATAATGGTGCCTGCCAAATCTGCCCGGAAACCACCTTGGTGCAATGTCGCTGTGGACACTCGAGCCGCGAGGTGCCCTGTGGTGAGCTCGCCGAAATGATCAACAACGTGCTGTGTCAGAAGAAATGTAacaagAAGCTGTCGTGCGGCCGCCACCGCTGTCGCAACGCATGCTGTGACGTGACGTCGCACCGCTGCACCGTGCTCTGCGCGCGCCACCTGCCGTGCGGCCTGCATCGCTGCGAGGAGCTCTGCCACACCGGCCACTGTCCGCCGTGCACGAACTTCAGTTTCGACGAGCTCCACTGCGAGTGCGGCGCATCAGTGCTGATGCCCCCCGTGCCGTGCGGGGCCCGCGCGCCCCCCTGCGAAGGGCCCTGTTCCCGCCCCCGCGCCTGCAGCCACCCCCCGCACCACTCCTGCCACTCCGGGGAGTGTCCGCCGTGTGTGGTGCTCACTACTAAGAGATGCTATGGCGGACACGAGGAGAGGAAGACCATACCGTGTTCGTTGGAAGAGTTCTCGTGCGGTCTGCCGTGCGGAAAGCCGCTGCCTTGTGGAAAGCACAACTGCATCAAGACGTGCCACAAAGGACCTTGCGACGCTGGCAAATGCACCCAGCCGTGTACAGAGAAGCGTCCCACCTGCGGCCACCCCTGCAACGCAGCCTGCCACTCGTCGGCGGCGGAGGGCAGCGCCGGCGCCGCGTGTCCGTCGAGCGCGCCGTGCCGCGCCGCCGTGCGCGCCGCCTGCCCGTGCGGCCGCCGCGCTGCGCCGCGCTCCTGCCACGACAACGCCAAGGACCTAGCGCGaatAATGAGTGCCCTAGCTGCGACGAAGATGCAAGAAGGAGGCTCCATTGAGATCACGGAGCAGCGTCCCGCGAACATGCTCAAAACTCTGGAATGCGACGACGAATGCCGAGTAGAAGCCCGCACACGCCAGATGGCGTTAGCACTGCAGATCCGCAACCCGGACGTGTCAGCCAAACTCGCACCTCGCTACAGCGACCACCTCCGCACCACTGCGCAGAGAGAGCCGTCCTTCGCGCAGCAGATACACGACAAGCTGACCGAGCTCGTGCAACTCGCTAAGAAGTCAAAACAGAAGACGCGCGCGCATTCCTTCCCATCAATGAACTGGCAGAAGCGCCAGTTCATACACGAGTTGTGCGAACACTTCGGCTGCGAGAGTGTGGCCTACGACGCCGAACCCAACCGGAACGTCGTCGCTACAGCTGATAAGGAGAAATCATGGTTGCCTGCAATGAGCGTGTTGGAGGTCCTGGGTCGCGAGGCAGGCAAGCGCCGGGTCCCGGGGCCCGTGCTGCGCGCGCCGCCGcagaccgccgccgccgcgccctcTGCCGCCAAATCCGCAAGTGGCTGGGCCACCCTGACCTCATCGAAATCCACTAACGCCTGGGCCGCCCGCAGCAAAACTCAAGTGCCACCCGAAAAACCGGAACCGAAACCAGAACCCAAGATTGACTACTTCGATAACCCGCCGGATAACTGA
Protein Sequence
MSQWNNSYAYNNQYQQGSNGWNGDPGNQHMNQAYYNRPDANGQYVSFNEFLNQMQNSNTAPHTNNQLPNSFSNVQYDNYSSGQYNYMPSSSQTQLNNVNYGTSNEAAPYPQSQFSAPPPEPTYSNNATFKSNLTATALEFVPKGSLPRPSRSKNIPDSSNSSKDISDDANEAQSNYGSSSDRNWRQRPLKSTEPKDKPMSNVQQDNSKGYGRNRDTSQRNNESNGRHNRNEDTSTEVSTRSTEPDNRNQEPNQQSYESNNVSQEPRQRNYDSNNRNQEPHSNRNQEPRKRNNDRNQDTRKNNDSSSRNRDSLNYNSNDRGQESRELDSNRYDSRNERRNQSKGNSKNKVKDERTFYNSGISKDGQDVRGGRGENSGRSDDRNRDSDGWPDGARDNYRRGEASRGDSYGSRDNYGRAEGSGRLQRNWAGTQRPRGDRREDDEQYANSYHQKEERERRVNERTERAYDRGERDKGYDRDRGFDRQDRDKQKNLFSPPKFKSKQQVDFANTEMTQRERLTDQLDKGTLECLVCCDRVRLTDPVWSCSNCFHVLHLKCIRKWAMSSVIEGKWRCPACQNISNKIPTEYRCMCGAMRSPDYQRGSAAHTCGKACKRERTCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVMCSSKLPQVCGRTCSRTLPCNVHQCTALCHEEACAPCDKTVVQVCYCAAATERTVLCTRETGSKTQWECERACGRILACGAHVCRAPCHAPPCQPCPLLPQAVRTCPCGKMQLDTNARKTCSDPIPFCGRICAKPLPCGPANDKHFCKLPCHNGACQICPETTLVQCRCGHSSREVPCGELAEMINNVLCQKKCNKKLSCGRHRCRNACCDVTSHRCTVLCARHLPCGLHRCEELCHTGHCPPCTNFSFDELHCECGASVLMPPVPCGARAPPCEGPCSRPRACSHPPHHSCHSGECPPCVVLTTKRCYGGHEERKTIPCSLEEFSCGLPCGKPLPCGKHNCIKTCHKGPCDAGKCTQPCTEKRPTCGHPCNAACHSSAAEGSAGAACPSSAPCRAAVRAACPCGRRAAPRSCHDNAKDLARIMSALAATKMQEGGSIEITEQRPANMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDHLRTTAQREPSFAQQIHDKLTELVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLGREAGKRRVPGPVLRAPPQTAAAAPSAAKSASGWATLTSSKSTNAWAARSKTQVPPEKPEPKPEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00700681;
90% Identity
iTF_00706625;
80% Identity
-