Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751124.1:7233014-7271627[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4 3.2e+02 2.9 0.1 2 23 421 442 420 442 0.86

2 14 0.14 12 7.5 0.0 1 23 452 475 452 475 0.92

3 14 0.054 4.4 8.8 4.3 2 23 638 659 637 659 0.95

4 14 2.8 2.3e+02 3.4 2.0 1 23 670 693 670 693 0.91

5 14 0.00041 0.033 15.5 0.6 2 23 700 723 699 723 0.97

6 14 0.07 5.7 8.4 0.2 1 23 729 751 729 751 0.93

7 14 0.0087 0.7 11.3 1.8 1 23 757 779 757 779 0.98

8 14 1.4 1.1e+02 4.3 0.0 2 19 790 807 790 810 0.88

9 14 0.35 29 6.2 0.1 1 23 888 910 888 910 0.96

10 14 2.1 1.7e+02 3.8 7.2 1 23 917 939 917 939 0.95

11 14 0.0014 0.11 13.8 1.8 1 23 968 991 968 991 0.95

12 14 4.4 3.6e+02 2.8 0.2 1 13 998 1010 998 1011 0.88

13 14 0.0041 0.33 12.3 0.3 2 23 1012 1034 1011 1034 0.96

14 14 0.00066 0.053 14.8 1.1 3 23 1075 1096 1073 1096 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4	3.2e+02	2.9	0.1	2	23	421	442	420	442	0.86
2	14	0.14	12	7.5	0.0	1	23	452	475	452	475	0.92
3	14	0.054	4.4	8.8	4.3	2	23	638	659	637	659	0.95
4	14	2.8	2.3e+02	3.4	2.0	1	23	670	693	670	693	0.91
5	14	0.00041	0.033	15.5	0.6	2	23	700	723	699	723	0.97
6	14	0.07	5.7	8.4	0.2	1	23	729	751	729	751	0.93
7	14	0.0087	0.7	11.3	1.8	1	23	757	779	757	779	0.98
8	14	1.4	1.1e+02	4.3	0.0	2	19	790	807	790	810	0.88
9	14	0.35	29	6.2	0.1	1	23	888	910	888	910	0.96
10	14	2.1	1.7e+02	3.8	7.2	1	23	917	939	917	939	0.95
11	14	0.0014	0.11	13.8	1.8	1	23	968	991	968	991	0.95
12	14	4.4	3.6e+02	2.8	0.2	1	13	998	1010	998	1011	0.88
13	14	0.0041	0.33	12.3	0.3	2	23	1012	1034	1011	1034	0.96
14	14	0.00066	0.053	14.8	1.1	3	23	1075	1096	1073	1096	0.95

Sequence Information

Coding Sequence: ATGAGATCCGTACTCGGCTACGACATTGACTTATCACTAATCACAAAGAACCAACCAGTAGAAATGACAGCGAACGTCTACCAGTTTCTAGTAAATCTAGAACTTACTGAAGAAGGTATACCACAAAACTACGATAGACCAGTAGACGCAAGCAACCAACCGATAGTACTAGACGAAAACCAACTTTACGTACTAGACGATGGAACACAAATTAGAGCTTCGCAAATCCACTTCGACAATGAAGACGCTCCTTTGGACCTATCGTTGGAACAACTCCCTTTCGTAAAAATCAACGATGAGGGTGAAAATATACCAGCTGATGATATTTTTGATGATATTACGCATAAAATCATAGCTAGCCCGGTACCTTTAACAAACTCTAGCCCCAAGCATGGTTTCATAAACCACGTACCTTTTAAACTAGTTTGCAACAACACTATTGGATTCGAAGCTCAGTTTACAAAATACCTAGAAGCTAGTAACAAGACCTACGCTACTCTCAGCAATGTAACTAAAAAGAACAAATCTCCAAGAAGTTTGATTAGAGACAACTTCAATGACAAAGAAGAGTTTAAATTCACTCGCGATGAGATACTGAATATGCTCAAAGATTCACCAGTTACAAGTATACCTTATGAGAACAATGAGAAAAAACACGTGAGGAAGACAGATCCGACTAAAATGGTCCAAAAGACAAGTACTAAAGCTATTGATATAGAAGGGCTAGTTATAGGCAATGGAGGGAACAGAAACTGCTTTATTTGCGGTACAAATGTCAGCAACGACAAAATATACCTCTTTGATAAAGAAGATCAGAAAATACATAAATGTTCGCCACAAAAGAAAATGTCAACACAACTGAAAATTATATGCGAGAATTGCCTGAACGATAACTTCAGACCATCTAGAATGAAAAACGCAAATCAACTCCTCAATTCCGAAGAGTATTTGGTAATAAGGAATAACCAGCAATACATATTTCAAAAGACAAAGAACTTCAAATTCCGAACGGATACCATAACCAAAACGAAGATGAGTAAAAAGGATGAGTTCGTGAAGTTTGATATCGGTTCTGATGGTGAGATCGTTACGAAACCAGTTGATGATGACGTCATTCTGGTACAAGATGGTAGAAGGGGTAGTTCTAGTGATGTAGAGGTTATAGAGGAAGTGGACAAGATCATAGACAATTTGGAGGAAGCGGACGAGGAAGTCAAGGTGTTTTTAGGGAAATATGACTGCGATGAAGTGAATGAGCTGAAATGCAGGTTCTGTGAGCGAATATTTTCGGCTGTATCAGAAGTGATAGAACATGGAGAGTTGCACAAGCACGACATAGATGATGATGTTGTGTTTCCTTGTCCTCTGTGTGACTTCGGCTACGCAAGCTTCCAATGGCTTAGGGGGCACTTGATTGCAGCACATGACAAGAAGGCAAACAAAGCTAAAGAATTTCATAAAGGTGCAGAGAGCTATGGAAACGCGCAGGATTCGAATGAATCGATCCACTCTGATCTAATAATAAAGACAGAAGTTAAACAAGAGGCGATAAGCAGTGATGACGAGATTTGGATAGTGCAAACCGGCGATGATGAGTCAACAGGACCTCTGAAAGACATTTTGGAAGCTGCCAAGTCTGCCAAGGTAATCTACCAATGGGGTACCCCCCTGTTAGACTTAGCAGGTGAAAGAAGGAACAGGAACCACAATAACTACCCATCGATAGAATCTCTGACTTCTCACATATGTCGAGGAAAAAAACGCATAACTAACGAAGATGCAATGAAAATACCAACAGAAGAAGATTTTATTAGGAGGGCTCAAGGAAAACCGCGGCATTTAAGTTCCGCGAATGCTGAGCTGATAGAGAAACACAAGAAGTCTAAAAACCTCTCAGAACACCAAATCGTCACATGTCACAACTGTAATCAATCGTTCACGTCTAAAGTGCGCCTTAAATTTCACATgCAATTCCACGATATGACCTCAATGCTGACAGACGGCCAGTACAAGTGCTTGCAATGCGTCGATATTTTTACAACGGAGACGCAGTTGTTCGACCATGTACACTTCACGCATGAAAAGATACGCAGATGGCAGTGTCCTGTGCAAGGGTGTCAGAAGACTTTCTATTTGAGGGCAACACTGACTAAGCACAGTCGAACGCACACAGACACGCGTCGGTACGTTTGCGTGACCTGCGGTAAACGCTTCCTGGATAAACAGACGTTGGACGAGCATGGTGTTACGCATTTacagATCAAACCATACCAATGCCACATTTGTCTGAAACAACTCACCCGCGTCTCTCGTTTGCGCATGCATGTGCGCGCGCATGAAGAGGAATTATCGCCGACGTTGTTGCCCGTCTGCAGAGTCTGTCGCCGGGCGTTCAGAGATGCCGTTGAGGCGCAGGAGCACGCAACAAAATCCTCGGATTGCATCGAAGCGATCGCTGGTGAAGTGAAGACAGAAGAAGAAACGGCTGTACAGCTGTCGCCCACCAGTGGAATTGTGCGGCAGACAATACAAGTCATTCAGTGCCCCTCCCCCAAAACGCGAGTACCACGTCAAGTAGCCTCGCCCGTAGCAGCCCCGCTTCTATCGTCGTTGACTAGCGACGCACTACCACTTATAAGAGTGGTCGAGATCGAGAAGGCTTTTAGATGTGAATATTGTGAAGATGTTTTCTACATAGAAGAAGGGCTGAACGACCACAGAGCGATCCACAAGGGCGTCAAAAATCCCTTTACGTGTCACATCTGCAAAGTTAGCTTTGCTACTTATTCCAGATGCACAACCCACAAGACCACTCATGGTTTCTACAAGCGACCGGCGGCGGCCGGCAATGACCAAGCTACGGGCGTCGTTGGTTATGGCGACTTTCCTACTGTCAAACACTTCTTGTGCGAGGACTGCGGAAGGTCGTATTTGCATTGGACTTACCTACAAGTGCACAGAAGAATGAAACATCCTAATGAAAACTACCCTCATAACTGTAACCAATGTGAAATGACGTTCCCTAACAGGATACCCTGCCGAGACTGTGACGAGGTCCTGCCAAATAAAACTGCTCTCTATAAGCATAGGAAGAAGGAGCATATTGGAGTATCAACGAGCTCTAACACTAGCACTGCCGCCGGATCAGCTTGCAATAGCCAGGTTGAGAGGACGCCCATGTCAGTACGCAGTAAGCTGGTGTCGTGCAGCCGTTCGTGGGCGTGCTCGCGCTGCCCCAAGCGCTTCCGGATCCGCTCCGAGCTGCGCTCGCATACTAGGCTCAAGCACCCGGCTTTTATCGCTGTACTAGAGGTGCAAGGTCGAAATCTGAGCGCTGAAGAGGCGGTCAGCATCATTAACTCAAACAACATCAGTCAAGACAGAATCATTGAGATCAGTGTCATGTCTTTTGCAAAgCGATTTTTAAATTTCTCCACTTCATCCTTCCTTGTTCCTTCGCTCACTTGA
Protein Sequence: MRSVLGYDIDLSLITKNQPVEMTANVYQFLVNLELTEEGIPQNYDRPVDASNQPIVLDENQLYVLDDGTQIRASQIHFDNEDAPLDLSLEQLPFVKINDEGENIPADDIFDDITHKIIASPVPLTNSSPKHGFINHVPFKLVCNNTIGFEAQFTKYLEASNKTYATLSNVTKKNKSPRSLIRDNFNDKEEFKFTRDEILNMLKDSPVTSIPYENNEKKHVRKTDPTKMVQKTSTKAIDIEGLVIGNGGNRNCFICGTNVSNDKIYLFDKEDQKIHKCSPQKKMSTQLKIICENCLNDNFRPSRMKNANQLLNSEEYLVIRNNQQYIFQKTKNFKFRTDTITKTKMSKKDEFVKFDIGSDGEIVTKPVDDDVILVQDGRRGSSSDVEVIEEVDKIIDNLEEADEEVKVFLGKYDCDEVNELKCRFCERIFSAVSEVIEHGELHKHDIDDDVVFPCPLCDFGYASFQWLRGHLIAAHDKKANKAKEFHKGAESYGNAQDSNESIHSDLIIKTEVKQEAISSDDEIWIVQTGDDESTGPLKDILEAAKSAKVIYQWGTPLLDLAGERRNRNHNNYPSIESLTSHICRGKKRITNEDAMKIPTEEDFIRRAQGKPRHLSSANAELIEKHKKSKNLSEHQIVTCHNCNQSFTSKVRLKFHMQFHDMTSMLTDGQYKCLQCVDIFTTETQLFDHVHFTHEKIRRWQCPVQGCQKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPYQCHICLKQLTRVSRLRMHVRAHEEELSPTLLPVCRVCRRAFRDAVEAQEHATKSSDCIEAIAGEVKTEEETAVQLSPTSGIVRQTIQVIQCPSPKTRVPRQVASPVAAPLLSSLTSDALPLIRVVEIEKAFRCEYCEDVFYIEEGLNDHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPAAAGNDQATGVVGYGDFPTVKHFLCEDCGRSYLHWTYLQVHRRMKHPNENYPHNCNQCEMTFPNRIPCRDCDEVLPNKTALYKHRKKEHIGVSTSSNTSTAAGSACNSQVERTPMSVRSKLVSCSRSWACSRCPKRFRIRSELRSHTRLKHPAFIAVLEVQGRNLSAEEAVSIINSNNISQDRIIEISVMSFAKRFLNFSTSSFLVPSLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00321910;
90% Identity: iTF_00699604;
80% Identity: -