Basic Information

Insect: Eupithecia subfuscata
Gene Symbol: -
Assembly: GCA_963564075.1
Location: OY751125.1:8625967-8627931[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0045 0.36 12.2 2.9 2 23 71 92 71 92 0.97

2 20 0.00078 0.063 14.6 5.9 1 23 97 119 97 119 0.97

3 20 2.7e-06 0.00021 22.3 0.4 1 23 138 160 138 160 0.98

4 20 0.00043 0.035 15.4 1.5 1 23 172 194 172 194 0.98

5 20 0.00026 0.021 16.1 2.2 1 23 199 221 199 221 0.99

6 20 0.00011 0.0088 17.3 0.6 2 23 226 249 225 249 0.92

7 20 2.3e-06 0.00018 22.6 0.6 1 23 255 277 255 277 0.97

8 20 0.0017 0.14 13.5 5.2 1 23 283 305 283 305 0.92

9 20 7.5e-06 0.00061 20.9 3.4 1 23 311 333 311 333 0.98

10 20 0.00011 0.0091 17.2 1.5 1 23 339 363 339 363 0.93

11 20 2.2e-06 0.00017 22.6 1.2 1 23 369 391 369 391 0.98

12 20 5.7e-05 0.0046 18.2 8.5 1 23 397 419 397 419 0.98

13 20 4e-05 0.0032 18.6 1.4 1 23 425 447 425 447 0.97

14 20 0.00045 0.037 15.3 0.1 1 23 453 475 453 475 0.98

15 20 0.00025 0.02 16.1 0.5 1 23 479 501 479 501 0.98

16 20 0.00018 0.015 16.6 3.5 3 23 509 531 507 531 0.91

17 20 2.6e-05 0.0021 19.2 1.1 1 23 537 559 537 559 0.97

18 20 7.3e-08 5.9e-06 27.2 0.6 1 23 565 587 565 587 0.98

19 20 0.00084 0.068 14.5 0.1 1 23 593 615 593 615 0.96

20 20 1.1e-06 9.2e-05 23.5 6.8 1 23 622 644 622 644 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0045	0.36	12.2	2.9	2	23	71	92	71	92	0.97
2	20	0.00078	0.063	14.6	5.9	1	23	97	119	97	119	0.97
3	20	2.7e-06	0.00021	22.3	0.4	1	23	138	160	138	160	0.98
4	20	0.00043	0.035	15.4	1.5	1	23	172	194	172	194	0.98
5	20	0.00026	0.021	16.1	2.2	1	23	199	221	199	221	0.99
6	20	0.00011	0.0088	17.3	0.6	2	23	226	249	225	249	0.92
7	20	2.3e-06	0.00018	22.6	0.6	1	23	255	277	255	277	0.97
8	20	0.0017	0.14	13.5	5.2	1	23	283	305	283	305	0.92
9	20	7.5e-06	0.00061	20.9	3.4	1	23	311	333	311	333	0.98
10	20	0.00011	0.0091	17.2	1.5	1	23	339	363	339	363	0.93
11	20	2.2e-06	0.00017	22.6	1.2	1	23	369	391	369	391	0.98
12	20	5.7e-05	0.0046	18.2	8.5	1	23	397	419	397	419	0.98
13	20	4e-05	0.0032	18.6	1.4	1	23	425	447	425	447	0.97
14	20	0.00045	0.037	15.3	0.1	1	23	453	475	453	475	0.98
15	20	0.00025	0.02	16.1	0.5	1	23	479	501	479	501	0.98
16	20	0.00018	0.015	16.6	3.5	3	23	509	531	507	531	0.91
17	20	2.6e-05	0.0021	19.2	1.1	1	23	537	559	537	559	0.97
18	20	7.3e-08	5.9e-06	27.2	0.6	1	23	565	587	565	587	0.98
19	20	0.00084	0.068	14.5	0.1	1	23	593	615	593	615	0.96
20	20	1.1e-06	9.2e-05	23.5	6.8	1	23	622	644	622	644	0.98

Sequence Information

Coding Sequence: ATGTTCATTTTATCAATTAATGAAGCTGATAGTGAATTGACTGTTAAAGAGGAACCAATTTCTTTAAAACAGGAAGAAATACCAGATGATATATTTGAAATGGCTCTTGCAGAGGATATTGAATCAGATGAACCATTAAAAGTATCTAAGAGCTTAAAACTAGAAAATACTTCTACAAGCAAGGAAAAGCTAAGCAATTTCCAAGATAACTATTGTCATAAGTGCAATATACCTTTTTTAAGCAAATATTACTACAACAAACACATGAAAATTCATATTGAAGGGAAGTACTGCTGTGACAAATGTCCTAAGAAGTTTAAATTCAAGAAAAGATTAGTAAAACACATGTTAAATCATAGCGATGAGAAAGAAATCAGCCCAAGGCAAAAACAAACGAAAGATACATCTGGATACACATGTGACGTCTGCAATAAAACTGTCAGTAATCTGTACAACCTTCAACTACACATGTCTGTACACACTAAGAAGAAACCTGAGCCTGCCACAACCGAATTTACATGTGACATCTGCAATAGAGGTTTGAATAACCTACATAACTTATTAAAGCACAAAGCAACTCATACAGAAGAAAAATACACATGCGATACTTGTTCTAGAAGCTACTTAAATAGGGATTCTTGGAGGAAACATATGAGAACTCATTCAGCACAGCATGCTTGTGACCACCCTGGTTGTGAAAAAGTCTTTCCGCaaagaaatcaattaatagtCCACCTAAGGGTTCATACTGGTGAGAGACCGTTCGCATGTGAAGAGTGCGGGAAATCATACACAAAAATGGAGTCCCTGAGAGTCCATCAAAAAACGCACTCAAATGAAAAACCACATAAGTGTATTTCTTGCAATAAGTCATTTAATTCTAAGGTTAATTTACTCCACCATATAAAATCACATACTGATAGCAACAGTTTTGAGTGCCAACATTGTAACAAGTCATTTTCTCTAGCTATTCATTTAGAGAAGCATATGGTAACCCACACATCTGTTAGAAGGCATATATGTGAAGAGCCGGGATGCGGAAAAGAATTTGCGAGACGCTTCCACTTAAAAGAACATAGTAGAATACATACAGGAGAAAGACCATTCTCATGCTCAGAGTGTGGTAAGACCTTTATGAAGTCAGAGTCTTTAAGATCTCATCTCAAAATTCACAGTGAAGATAAACCCCATAAGTGCACGTCGTGCTCCAAAGCGTTTCATCGAAAGAGGAATCTACAAAAACACATGAAAACACATGACGAAAAGGAGTCTTTTGATTGTGAGCATTGTACTAAAACTTATACTCTACCCATCCAATTGGAAACCCATATGCTAACCCATACAAACTTAAAACCTTACGCTTGTACCCAATGCGTCCTAACCTTTGCTGCTCTAAGCAGTTTGCAGGCTCACTTAAAAACCCACGAGTACAGATACACCTGTGACAGATGTGCAAAAAGTTTCGGCGAAAAAGGAACTCTTCAGAGTCATATAAAACTCCACGATGGAATAAAACCTCATTTGTGCGAGCACCCTGGTTGCGGCAAGGCTTTTGCTAGACGCTACCATTTGAAAGAACACTCCCGCGTTCACACAAAAGAAAAACCTTTTATATGCAACGAATGTGGGAAGACATACACACAGAGCAGTGCTCTATTCTTCCACCAGAGACTGCATAGCGGAGAAAGACCATTTATCTGTGAAATCTGTGGTCGAACGTTCACGGATAAGTATGGCCTGCAAAAACATACAAGGGTGCACACGGGTGAGAAACCCTATGCTTGTGACAGTTGTGATCTGAGATTCGCGTATGCAAGTGCCTTGCGCGATCATAGGGCCATACATGTGAACGGGGAGAAACCATACGCGTGCGATAGGTGTTTTAAGACCTTCTGTCGTAAGAGTAACTTGAAGAAGCATATGAAAACGCATTTAAGGgataaacagttttttaaaagcCCGTGA
Protein Sequence: MFILSINEADSELTVKEEPISLKQEEIPDDIFEMALAEDIESDEPLKVSKSLKLENTSTSKEKLSNFQDNYCHKCNIPFLSKYYYNKHMKIHIEGKYCCDKCPKKFKFKKRLVKHMLNHSDEKEISPRQKQTKDTSGYTCDVCNKTVSNLYNLQLHMSVHTKKKPEPATTEFTCDICNRGLNNLHNLLKHKATHTEEKYTCDTCSRSYLNRDSWRKHMRTHSAQHACDHPGCEKVFPQRNQLIVHLRVHTGERPFACEECGKSYTKMESLRVHQKTHSNEKPHKCISCNKSFNSKVNLLHHIKSHTDSNSFECQHCNKSFSLAIHLEKHMVTHTSVRRHICEEPGCGKEFARRFHLKEHSRIHTGERPFSCSECGKTFMKSESLRSHLKIHSEDKPHKCTSCSKAFHRKRNLQKHMKTHDEKESFDCEHCTKTYTLPIQLETHMLTHTNLKPYACTQCVLTFAALSSLQAHLKTHEYRYTCDRCAKSFGEKGTLQSHIKLHDGIKPHLCEHPGCGKAFARRYHLKEHSRVHTKEKPFICNECGKTYTQSSALFFHQRLHSGERPFICEICGRTFTDKYGLQKHTRVHTGEKPYACDSCDLRFAYASALRDHRAIHVNGEKPYACDRCFKTFCRKSNLKKHMKTHLRDKQFFKSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706248;
90% Identity: iTF_00706248;
80% Identity: -