Esub009650.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia subfuscata
Gene Symbol
-
Assembly
GCA_963564075.1
Location
OY751102.1:5621016-5643966[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.00011 0.0091 17.2 2.2 1 23 414 436 414 436 0.97
2 25 0.00039 0.032 15.5 1.0 1 20 442 461 442 464 0.94
3 25 0.00097 0.079 14.3 5.6 1 23 483 505 483 505 0.98
4 25 0.00014 0.011 17.0 4.1 1 23 511 533 511 533 0.99
5 25 5.2e-05 0.0042 18.3 5.3 1 23 539 561 539 561 0.97
6 25 7.4e-06 0.0006 20.9 8.4 1 23 567 589 567 589 0.97
7 25 3.3e-06 0.00027 22.1 3.0 1 23 595 617 595 617 0.97
8 25 0.00014 0.012 16.9 6.7 1 23 623 645 623 645 0.97
9 25 8.6e-05 0.0069 17.6 3.1 1 20 651 670 651 672 0.94
10 25 4e-05 0.0032 18.6 6.3 1 23 681 703 681 703 0.97
11 25 0.00087 0.07 14.4 0.5 1 16 709 724 709 725 0.97
12 25 2.7e-05 0.0022 19.1 6.4 1 23 755 777 755 777 0.98
13 25 0.0012 0.1 13.9 0.4 1 16 783 798 783 799 0.96
14 25 1.4e-05 0.0012 20.0 1.3 1 23 829 851 829 851 0.98
15 25 6.9e-07 5.6e-05 24.2 1.9 1 23 857 879 857 879 0.98
16 25 7e-05 0.0057 17.9 7.9 1 23 885 907 885 907 0.98
17 25 0.00018 0.015 16.5 6.8 1 23 913 935 913 935 0.97
18 25 5.8e-06 0.00047 21.3 5.6 1 23 941 963 941 963 0.98
19 25 2.5e-05 0.002 19.3 6.7 1 23 969 991 969 991 0.97
20 25 4.9e-06 0.0004 21.5 5.2 1 23 997 1019 997 1019 0.98
21 25 2.7e-06 0.00022 22.3 3.6 2 23 1026 1047 1025 1047 0.98
22 25 2.5e-05 0.002 19.3 8.1 1 23 1053 1075 1053 1075 0.97
23 25 2.4e-06 0.00019 22.5 6.5 1 23 1081 1103 1081 1103 0.98
24 25 0.00063 0.051 14.9 0.3 1 23 1110 1132 1110 1132 0.97
25 25 0.22 18 6.8 6.2 1 23 1142 1164 1142 1164 0.98

Sequence Information

Coding Sequence
ATGAATCCTGAGCATCATAATATCAATACGGGCGGGGGCCAACCTCCTGGGAGTTCGGAGTCTCAGAATCAAAGAGCACAAGCTCACCAGCAGCAGCAGCAAATAAGCCTACCTGCCACCACGTCTGCCACCGATTTGCGAGTCAACTCTGCTGCTGTAAACGTTGCTTTGTCCAGTGTTGCTAAGTACTGGGTATTTACGAATTTATTCCCCGGACCTATTCCTCAAGTGTCCGTCTACGGTCTTCCAACTGGAACAAGAATTGAAAATGGAAAAGCTGTTCAGgaTCTTGGACAAGCACATGCAAGTATACTCAATGGGGATCCAAACATTATTCTTGGGCATCACGGAGGACAGTCCCAGGTCACAGTATCTGCGGCCCAACAGATACCTGTGTCCCAAATCATTGCCACACAGTCTGGGCAGACACATGAAGCATTGGTGGCACACAGTCAACAGCAAGAACTACAGTCTTCCAACCAGGTCACCACATCTCATCACCAGGTACCCACTAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGGCATCATTCTCAACAACAACACCTAATGCAGCAGCAACTTATGGCAGCCTCAAGGCCAGAACACTCAAACCAACAGATCCAACTGACTGTCAGTGAAGACGGAATCGTGACGGTAGTAGAGCCAGGCAGCAGTAAAATGGCGGAGAAGGAAGAGATGCATGAATCGATCAAGCTACCGTCGGATCATACACTCACTGTACATCAATTGCAGCAGATTGTCGGACAACAGGTGCTAGACAGCGTGGTTCGCATCGAGCAAGCGACCGGCGAACCAGCTAACATTCTAGTCACGCACAATCCTGACGGCACCACGTCGATCGAAGCCAGCGCTAGCGATCCGCTAGCTATCGTCAAAGATGAGAAGAACCAAGGGAAGATTGAGGCGTCGCAGTTCGCTATACCGGCCGAGATCAAGGAAATGAAGGGCATTGATTTAAAGTCTGTCAACGCCATGAACATGGAAGGCGCAGTAGTGAAGATATCAACGGGTGCGCCAGAACACGATCTACACGCCATGTACAAAGTAAACGTCGAGGATCTGTCGCAGCTGCTGGCGTACCACGAAGTCTTCGGGAAAATGGGGCCCGATGGACAGCCTCAGGCTAAAGTCTCTGTAGGCGATGTAGAAATTGAAGTGCCTGGAACGAGTGCCGGTATGTCCGAAGCGGAGAACTCGCCCGGACACCATTCCTGTGATATCTGCGGGAAAATATTCCAATTCCGGTATCAGCTAATTGTACACAGACGTTACCACGGCGAGACCAAGCCATTCACATGCCAAGTTTGCGGCACCTCATTCGCGAACCCCGTAGAACTATCCCGGCACGGGAAGTGCCATTTGGCAGGTGACCCAGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTCTTGCGTAAGGAGCACCTAAACAACCACGTACGCAGTCACACGGGAGAAACTCCATACAGGTGCGAGTTCTGCGCCAAAACATTCACCCGGAAAGAGCACATGGTAAACCACGTGCGGAAACATACGGGAGAGACGCCGCATCGCTGTGATATCTGCAAGAAGAGCTTTACAAGGAAGGAGCATTTTATGAACCATGTTATGTGGCATACAGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAATATACTAGAAAGGAACATTTGACGAATCATATGAGATCGCACACGAACGATACCGCGTTCCGCTGTGAACAGTGCGGAAAATCCTTCACGAGAAAAGAGCATTACTCCAATCACATTTTGTGGCACACTGGCGAAACCCCTCACCGCTGCGACTTCTGCTCAAAAACCTTCACCCGTAAGGAGCATCTCTTAAACCACGTGAGACAACACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTGAACCACGTGAGTTACTACTACAACACGGGACAGTCGCCGCATCGCTGCAGCTACTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTGAACCACGTCCGACAACACACGGGAGAGACGCCCTTCCAATGCGGATACTGTCCTAAAGCATTTACAAGGAAAGACCATTTAGGTGAGTTACTACTACAACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTGAGTTACTACTACAACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTGAACCACGTCCGACAACACACGGGAGAGACGCCCTTCCAATGCGGATACTGTCCTAAAGCATTTACAAGGAATGACCATTTAGGTGAGTTACTACTACAACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTGAGTTACTACTACAACACGGGAGAGTCGCCGTATAGCTGCAACTACTGCTCCAAGTCGTTCACGCGGCGCGAGCCCCTCGTGAACCACGTCCGGCAACACACGGGGGAGACGCCCTTTCAATGCGGATACTGTCCTAAAGCATTTACTAGGAAAGACCATTTAGTAAACCACGTTCGACAACACACCGGTGAATCTCCCCACAAGTGCTCGTTCTGTACGAAATCCTTCACTCGCAAGGAGCACCTCACGAACCATGTGAGGCAACACACGGGCGAGTCTCCCCATCGATGTACATTCTGCGCCAAGTCTTTCACGAGGAAAGAACATCTAACCAATCACGTCAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAGCACACGGGCGTCACTCCGCACTCCTGCTCTTACTGTAGTAAGACCTTCACGAGGAAAGAGCATCTCGTCAACCACGTACGGAAACACACTGGCGAAACACCGTTCAAGTGCACGTTCTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACATAAATCTGCACACGGGGGAGACGCCGAACAAATGTCCATTCTGCACTAAATCCTTCTCTAGGAAGGAACATCTTACGAACCATGTCAGAATACACACCGGCGAGTCGCCGCACCGCTGTGATTTCTGCCAGAAAACGTTCACTCGTAAGGAACATTTGACGAACCATATGAAACAGCACACGGGTGGCGCTGCTCACACGTGTAAGATTTGCCAGAAACCATTTACAAGGAAAGAACATCTACAGACGCATATGAGGTATCACAGTTGTAACGACCGACCGTTCAGTTGTGGAGAATGCGGCAAATCCTTCCCACTGAAGGGTAATCTCATGTTCCACGAGCGGTCTCACAACAAATCCGGAGGAGGCCCGAGGCCTTTCCGCTGCGATATCTGTTCAAAGGACTTTTTGTGCAAATCTCATTTACAAACTCACCGGCGGGTACACGAGGACGCCGGTGACGAAGCCTCGGCAGAGACGCAGACAGAGAATGAAGAGTGCTTGACCGTCACCACAGATTGCACCAATAAATGCATTAAAGTGGAGCTTGACTCGGCAGAACAAAGAACTTCTGTAGATAATGGACCAACGGAAACTATCGTAGTGCAGCCTGCACTTGATTCCCCAAACCACATAGTAGTCACCCAAACTCAAAACACTGTGATGCAGATAAGCAGTCAAcaGGTGCGAGTAGGATCACCAAGTCCAGCTGGTGTAACCACAGGCACTTTCACCCACACGGTGAGCGCACAACATCATCCAGGTTCCACGATCGCGCACCACCCGGTCACTGTGAACTACTAG
Protein Sequence
MNPEHHNINTGGGQPPGSSESQNQRAQAHQQQQQISLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHEALVAHSQQQELQSSNQVTTSHHQVPTNRVEFVQHHNIDMGHHSQQQHLMQQQLMAASRPEHSNQQIQLTVSEDGIVTVVEPGSSKMAEKEEMHESIKLPSDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKNQGKIEASQFAIPAEIKEMKGIDLKSVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSVGDVEIEVPGTSAGMSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTAFRCEQCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVSYYYNTGQSPHRCSYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGELLLQHGRVAASLQLLLQVSYYYNTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRNDHLGELLLQHGRVAASLQLLLQVSYYYNTGESPYSCNYCSKSFTRREPLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTFCSKSFSRKEHLTNHINLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCNDRPFSCGECGKSFPLKGNLMFHERSHNKSGGGPRPFRCDICSKDFLCKSHLQTHRRVHEDAGDEASAETQTENEECLTVTTDCTNKCIKVELDSAEQRTSVDNGPTETIVVQPALDSPNHIVVTQTQNTVMQISSQQVRVGSPSPAGVTTGTFTHTVSAQHHPGSTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704247;
90% Identity
-
80% Identity
-