Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: RREB1
Assembly: GCA_963931895.1
Location: OZ007542.1:4952348-4957419[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.17 12 7.1 1.4 1 23 57 80 57 80 0.91

2 12 4 2.9e+02 2.8 0.1 1 22 109 130 109 130 0.93

3 12 0.023 1.6 9.9 0.1 1 23 257 279 257 279 0.97

4 12 0.0012 0.086 13.9 0.4 1 23 288 310 288 310 0.99

5 12 0.00075 0.053 14.6 2.0 1 23 316 339 316 339 0.97

6 12 0.003 0.22 12.7 1.6 1 23 689 712 689 712 0.96

7 12 0.00025 0.018 16.1 1.3 2 23 899 920 898 920 0.97

8 12 0.026 1.8 9.7 5.3 1 23 926 949 926 949 0.97

9 12 0.045 3.2 9.0 1.1 1 23 982 1006 982 1006 0.93

10 12 0.059 4.2 8.6 0.4 1 23 1029 1052 1029 1052 0.97

11 12 0.0019 0.13 13.3 0.2 2 23 1092 1113 1091 1113 0.96

12 12 0.012 0.83 10.8 5.0 1 23 1119 1141 1119 1141 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.17	12	7.1	1.4	1	23	57	80	57	80	0.91
2	12	4	2.9e+02	2.8	0.1	1	22	109	130	109	130	0.93
3	12	0.023	1.6	9.9	0.1	1	23	257	279	257	279	0.97
4	12	0.0012	0.086	13.9	0.4	1	23	288	310	288	310	0.99
5	12	0.00075	0.053	14.6	2.0	1	23	316	339	316	339	0.97
6	12	0.003	0.22	12.7	1.6	1	23	689	712	689	712	0.96
7	12	0.00025	0.018	16.1	1.3	2	23	899	920	898	920	0.97
8	12	0.026	1.8	9.7	5.3	1	23	926	949	926	949	0.97
9	12	0.045	3.2	9.0	1.1	1	23	982	1006	982	1006	0.93
10	12	0.059	4.2	8.6	0.4	1	23	1029	1052	1029	1052	0.97
11	12	0.0019	0.13	13.3	0.2	2	23	1092	1113	1091	1113	0.96
12	12	0.012	0.83	10.8	5.0	1	23	1119	1141	1119	1141	0.97

Sequence Information

Coding Sequence: ATGGAAAGGATGATTGTCGAGCGGCAGGAGCTGCGAGGCACTCGCACTACCAGCATCGACAGTGACAACCGGTCCGACCGGAGCGAGGAAGAGGAGTGCCGACGCGCGAGGAAGCGAGCCGCCTCCGCCTCCCCCTCTTCCATGCCCCTCGACAAGAGGATCGCGCGCTTCGAATGCCCCACATGCCACCAAAGATTTGACTCCGGGAACGCATTCGATATGCACCGTTTCACAGCCCACGGCGACGACTCCCGCTCGGGATACGAAGACTTAGTCGACTTTTCCAACAAAAAGTTCCCTGATATCACCCGCGGACTCCACAACTTCCGATGCGATCTTTGCATGAGAGATTTCGTCAACGCACAAGTCCTGGACATCCACAGGAAGACGTGCTCCCCTtccaacagaatacctacaccCGACCGCGATCGCAGAGAAGATTTCTTCGCGAAACTGGACCTTAGGAACAGGTCGTTTGGTATTCCGGGCACGTTGACTCCGCCTATGGAGAGGTTCACGACGAAGTTCGACGATGGACATATCAGTAACGGTATGCGGCATATGGACGCCGCCCGAGACTTGGCAGATATTCAATCGATACTCAACGTCACGTCGACGGGAAGCCTTTTAGAGAGACTCACTGGCACCAGAGTCAATTTAGAAAGTTCTGTGCTGACGCCACCGGACACTATTGGGAAAGATCGTGACCAGGAAGAGACGCAGGACAATTTCGCCGCTGAGTTCAGACGAATGAAGCTACGAGGAGAATTCCCTTGTAGATTATGCCCTGCGAAGTTCCCGAATCTACGAGCCTTGAAGGGACATAACAGGGTGCATCTGAGCGGTACTGGTCCCGGCCCTTATCAATGCAACATGTGTCCGCACGCGTCCCTGGATAAAGCAGCGCTGGTGCGGCACATGAGGACCCACAACGGAGATAGACCTTACGAGTGCGCTGTTTGCAACTATGCTTTCACCACTAAAGCCAACTGCGAGAGACATTTGAGAAACAGACACGCTAAAGTCACTAGAGAAGATGTAAAGCGTTCCATCATTTACCATCCGTCCGAAGATCCTAACAACGACGAAGTCAATTCAAAACTGGCACGAGATGAGGTCAAGCGATCTCTTACTTTTCATTCTCCACCTGATATTGACCGGCGCAACGAAAACACTGGCCGAGATACTCCGGTAACACACCATTTCTCACCTGGCTTCATAACTAAAGGACATCCGGTGGCTGCGCTGACAACAAAACCCATTCCCGATCTAACCCCGCTTCCACCGAGAGAACCTGACCCACCCAAACCGAAAATTAGCATAAAAAGCATCGGGCAGCTCACACAGATCCCGGAATTCAGGGTTCCAGAGCTATCTTTCAAGAACAACGATATCAATTCCGATGTTTATGATGAGGAAGCTCCAGTAGATTTGAGCCGGAATGACAATAACTGTGACGTTCTCGATCTCAGCAAGAAGAAGCGTGACAGCGAAAACGAGGAGCCTAAAAATCGCACTCCATCGCGTCCGGCCTTCGAAGCCGATGCCGCATCCGCTGCAGCTACAGCATACGAGAAAACAAGCCTACTGCTGGCTCAACAGAGACTTTTCGAAAACACTCTTCCAAAAATTGATCCAGCTTACTACGCAACTCAACTTTCTCAACTCTATGCCGGAGCGGTCCCCGGTCTGCCTGGTCTTCCTATACCACCTTCTTTTCCTTATTTTCTCCAGCCTTCTTTTTTTCCTCACCCTTCTGACTCCCCCGAAATGACAGAGATCAAACAACGCATTCAGAAGGAAATCATTCGTGGGCTGAGCATGTCTGGTGGGAGGCTCGTCCCTAATGAAGCGGACATTCAGCCGAAGCAGGAGCCTGAACCCGAGATTGAGGAGAAGCCAGCCCCTTTGGTCATATCCCCCGCGCCTTCACCGCTCTCGGAATCTCCACGCCCGATGTCGAACGGCGGAATGGTCCCGCAAACAGATTCGGTGAAAATGGTCATCAAGAACGGAGTTCTCATGCCGAAGCAGAAGCAAAGACGTTACCGTACAGAAAGACCTTTTTCTTGCTCCCAATGCTCTGCGCGATTCACCCTGCGCTCGAACATGGAGCGCCACGTGAAGCAGCAACATCCTCAGCATTGGAGCGTGAGACGGCCGGCTCCTAGGGCTCCACCACCGTACCCCACATCTGATGCTTTGGCTGACCGTGTGAAATTCGCATTGCTAGCCCGCCATCTTGAAAGACCACTGCAACAACCTGAGCACTCACCCATCCGCCGTGACTCAGATGAAGTTGCTGATAATGAAGAAGACGAAGACGATACTTTGGTTATCGATGAGGAACCAGAAATGGAGCCGGAAGAACATCCAGCCGCGAAACGAGCAGCCGCTGAAATTCTCATGGCAACATGCCAACAGGAAATGCATAAGGACTTTGATCTCAAAATCGCTGGCAATCTGATCAACAAGCCAGTCGACAAGATCGAGACTGGCACGGACCCTATACCGTTAGATTCCTTGCCTGTTCCGGTGGTTCCAACAAGGAGTGATGAAGAAGAAGATGAAGAAGGCTTGGTTGCTTCCACCAGTGAGGGCAACAACTCTGGCAGCGATGAGAACAAATCCGAATCCGATGGAACCCAGCCACCAAAGAAGCGCTCAGCTTACAGCTTAGCCCCCAACCGAGTGTCATGCCCCTACTGCCACCGGAAGTTCCCCTGGTCTTCCTCCCTTCGCCGCCATGTCCTCACCCACACCGGACAGAAGCCTTTCAAGTGCCCCCACTGCCCCTTACTATTCACCACTAAATCCAACTGCGACAGACACCTACTCCGAAAGCACGGCGGTTCAGCGCGAGCGATCCTCACCGAGCCGATTCCCGATGCCGTCTCCCCACCACAACTAGCTAACGACATCAGAACCGTCCCGGAACGTCCATATAAATGCGGAACTTGTCCCACTAGCACTTTTTCCTCTATGGACAGTTTGAAGAAGCATATCACCTCCCGCCATGGTTCCGTGGAGTCTCAACCCAGCTCACCAAGCCCTGACCACGATGACACTCTAGAAGGTCTAGTGTTCAAGTGTCACCTCTGTGAAGCTGGGTACAACGACCGAAGTGGGACTCTGAACCATCTAGCGACCGCACACACGACTGAGTATGAGCAACTGGTGAGCAAGGGTGCGTTGGATGCTGCCAGTGACAAAAGTGAAAACACGGATGACGATGACAGGGGAAAGTTTCCTGATCACGCTAATAGGAAGGTGGTCTGCGCATTCTGCGTCCGTCGTTTCTGGTCTGCTGAAGACCTACGTCGCCACATGCGGACACACTCCGGCGAACGGCCCTTCGCTTGCGACCTCTGTCAGCGTCGCTTCACCCTGAAACACAGCATGCTACGACACAGGAAGAAGCATAGGGAAGAAACTGATGATGAGGAGCCTTGTAGCACCCCGGAGGAGAAAACTAATGGCTACCGCTTCCAAGACGAGGATTCCGGCAACGAAATCCCAAACAACGTCAACAACAACAACTCACCGCCCGCAGCGCCCTACGACAAGAAAATCAAACTAGACATGATGTCCCGTAAATACTCCTCCGAAGAAAACGACGGAGAGAACGGCAGCGATCTAATCGGGAAACTTCTTGGCATCCCCGATAAGACGATCAACAAGCTTCTGTCTTCAGCGGACGAGGCGGCCAAAATACTTGGAGTGAATAAATGA
Protein Sequence: MERMIVERQELRGTRTTSIDSDNRSDRSEEEECRRARKRAASASPSSMPLDKRIARFECPTCHQRFDSGNAFDMHRFTAHGDDSRSGYEDLVDFSNKKFPDITRGLHNFRCDLCMRDFVNAQVLDIHRKTCSPSNRIPTPDRDRREDFFAKLDLRNRSFGIPGTLTPPMERFTTKFDDGHISNGMRHMDAARDLADIQSILNVTSTGSLLERLTGTRVNLESSVLTPPDTIGKDRDQEETQDNFAAEFRRMKLRGEFPCRLCPAKFPNLRALKGHNRVHLSGTGPGPYQCNMCPHASLDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKVTREDVKRSIIYHPSEDPNNDEVNSKLARDEVKRSLTFHSPPDIDRRNENTGRDTPVTHHFSPGFITKGHPVAALTTKPIPDLTPLPPREPDPPKPKISIKSIGQLTQIPEFRVPELSFKNNDINSDVYDEEAPVDLSRNDNNCDVLDLSKKKRDSENEEPKNRTPSRPAFEADAASAAATAYEKTSLLLAQQRLFENTLPKIDPAYYATQLSQLYAGAVPGLPGLPIPPSFPYFLQPSFFPHPSDSPEMTEIKQRIQKEIIRGLSMSGGRLVPNEADIQPKQEPEPEIEEKPAPLVISPAPSPLSESPRPMSNGGMVPQTDSVKMVIKNGVLMPKQKQRRYRTERPFSCSQCSARFTLRSNMERHVKQQHPQHWSVRRPAPRAPPPYPTSDALADRVKFALLARHLERPLQQPEHSPIRRDSDEVADNEEDEDDTLVIDEEPEMEPEEHPAAKRAAAEILMATCQQEMHKDFDLKIAGNLINKPVDKIETGTDPIPLDSLPVPVVPTRSDEEEDEEGLVASTSEGNNSGSDENKSESDGTQPPKKRSAYSLAPNRVSCPYCHRKFPWSSSLRRHVLTHTGQKPFKCPHCPLLFTTKSNCDRHLLRKHGGSARAILTEPIPDAVSPPQLANDIRTVPERPYKCGTCPTSTFSSMDSLKKHITSRHGSVESQPSSPSPDHDDTLEGLVFKCHLCEAGYNDRSGTLNHLATAHTTEYEQLVSKGALDAASDKSENTDDDDRGKFPDHANRKVVCAFCVRRFWSAEDLRRHMRTHSGERPFACDLCQRRFTLKHSMLRHRKKHREETDDEEPCSTPEEKTNGYRFQDEDSGNEIPNNVNNNNSPPAAPYDKKIKLDMMSRKYSSEENDGENGSDLIGKLLGIPDKTINKLLSSADEAAKILGVNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661758;
90% Identity: iTF_00699587;
80% Identity: -