Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007550.1:193488-198053[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0045 0.32 12.1 0.1 1 20 115 134 115 136 0.94

2 21 0.019 1.3 10.2 0.1 3 21 265 283 263 284 0.94

3 21 2.6 1.9e+02 3.4 0.1 12 23 297 309 291 309 0.86

4 21 0.02 1.4 10.1 0.8 1 23 314 337 314 337 0.96

5 21 0.0013 0.093 13.8 1.7 1 23 342 364 342 364 0.98

6 21 0.58 41 5.5 2.6 1 20 367 386 367 388 0.92

7 21 0.00041 0.029 15.4 0.3 1 23 400 423 400 423 0.94

8 21 2.9e-05 0.002 19.0 1.9 1 23 429 451 429 451 0.98

9 21 0.53 38 5.6 1.3 5 23 461 479 459 479 0.96

10 21 0.0015 0.1 13.6 0.9 1 23 485 508 485 508 0.98

11 21 0.013 0.91 10.7 0.2 3 23 518 539 517 539 0.96

12 21 0.00016 0.011 16.7 0.3 2 21 649 668 648 669 0.94

13 21 0.37 26 6.1 0.0 3 23 676 697 674 697 0.95

14 21 0.013 0.96 10.6 0.0 3 23 704 725 703 725 0.95

15 21 4.3e-05 0.0031 18.5 0.4 2 23 731 752 730 752 0.95

16 21 0.024 1.7 9.8 3.5 2 20 756 774 755 776 0.93

17 21 1.3e-05 0.00095 20.1 0.3 1 23 800 823 800 823 0.95

18 21 0.0012 0.087 13.9 3.2 1 23 829 851 829 851 0.96

19 21 0.037 2.7 9.2 0.2 1 23 857 879 857 879 0.98

20 21 0.012 0.86 10.8 0.1 1 23 885 908 885 908 0.94

21 21 6.2e-05 0.0044 18.0 0.9 1 23 914 937 914 937 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0045	0.32	12.1	0.1	1	20	115	134	115	136	0.94
2	21	0.019	1.3	10.2	0.1	3	21	265	283	263	284	0.94
3	21	2.6	1.9e+02	3.4	0.1	12	23	297	309	291	309	0.86
4	21	0.02	1.4	10.1	0.8	1	23	314	337	314	337	0.96
5	21	0.0013	0.093	13.8	1.7	1	23	342	364	342	364	0.98
6	21	0.58	41	5.5	2.6	1	20	367	386	367	388	0.92
7	21	0.00041	0.029	15.4	0.3	1	23	400	423	400	423	0.94
8	21	2.9e-05	0.002	19.0	1.9	1	23	429	451	429	451	0.98
9	21	0.53	38	5.6	1.3	5	23	461	479	459	479	0.96
10	21	0.0015	0.1	13.6	0.9	1	23	485	508	485	508	0.98
11	21	0.013	0.91	10.7	0.2	3	23	518	539	517	539	0.96
12	21	0.00016	0.011	16.7	0.3	2	21	649	668	648	669	0.94
13	21	0.37	26	6.1	0.0	3	23	676	697	674	697	0.95
14	21	0.013	0.96	10.6	0.0	3	23	704	725	703	725	0.95
15	21	4.3e-05	0.0031	18.5	0.4	2	23	731	752	730	752	0.95
16	21	0.024	1.7	9.8	3.5	2	20	756	774	755	776	0.93
17	21	1.3e-05	0.00095	20.1	0.3	1	23	800	823	800	823	0.95
18	21	0.0012	0.087	13.9	3.2	1	23	829	851	829	851	0.96
19	21	0.037	2.7	9.2	0.2	1	23	857	879	857	879	0.98
20	21	0.012	0.86	10.8	0.1	1	23	885	908	885	908	0.94
21	21	6.2e-05	0.0044	18.0	0.9	1	23	914	937	914	937	0.96

Sequence Information

Coding Sequence: ATGGAAGATGGCAATGGACGCAACATCCCGCAACAGCTGTGCCAACAATGCATGTCTGACATCGCCGCATTTCTACCCTTCCTGAAACTCTGCAAGCAATCCGCCGAACATTGGAGCTTTTTATCTGAGAATTTGATTGACCTTTCTAGCCAGAAGATTTATAACACAGCGTTCATTTTTGTCAACGATAAAATTGATAGAGTTACCACTGTGTTCGAGAAGAGGGATAGAAACAAGAACAAGTTGTGGCCGGTCATCACGAAGCGGATGAACCAACTAGAGTCGTCCAGACGGACACAAGAGTCGAACTACGATACCCAAATGAAGCCAGGAAAGTTTTTCTACATATGCGTAGAGTGCGGCGTGAAGTTTAGGCGAttgaaaaacattaataatcATTTAGCGAACCAGAAAAAGCGTTTTTGTCGTCATTGCTACTCGAAAATCAAAACTTTACCCCGTGAAGAAACGAAGACTGACGCTGACGCCTGGTTTCAGGTGGACTATGGCCCCGCGCTCCCGCCGGGGCTCTGCAGTGCTTGCGCAGACGACGTTATATCCGCTGCCAAATTCAGACAACTTACTAATAAGTCCGCGAAATGCTGGAGCGAAGCGGCTCGATACCTCTCACAAATAGATAGCGAGAGCAACGACACGAAAACACTGCTTTACGTCTATGAAGAACACACTTTAATTTTCTACGAGAAACGGGCCAAGAGTGTTCAATCTGCTGTAACAACTCTCTGTAATTTCGAGAAGGAATCAACGATCAATAAAAGAAAATCTACTGCATGCCCGTTCTGCGATAAACGGGTGATTTCTGTGCAGAATCTCAACCAACATCTTAAAAACAGTTCAAAAAGAATGTGCATTTGCGGTTTGATTATGGACAAATCAGAACTCTGTAAACATTTGCGAGAGACGCATAAGATCGAAGTCTTCGAATGTAGTATCTGCCATGAGCAGTTTCAGAGTGACGCGGTTCTAAAGTGGCATATTACGAAATCCCACGGTCCTAAGTCGTTCTATTGCGAGCATTGCGGAAGTGGTTACAGAAACGAGAGAGCCTTGCGGGCCCATTACTACACCCATACTTTGTTCGACTGCTCCGCTTGTGGGAGAACTTTTGAGAACATCCGCTGTTACCGTCACCACAAAACTATATGCAAACTTAAACACAAAAATGACTTTAGTATATTTGAGTGTAATGACTGCGGACAGCAATATGACAAGAAAGGATCTCTTAGGGTACACgttatacaaaaacatttaaatgtCTTACCATACGTTTGTCAGATCTGCGGCAAGCAAACTTCTACCTTAAGTCACTTAAGGTCACATTCTAAGGTTCACGATGCAGATAGGAAGACTTTAGAATGCCACTGTGGGGCTAAGTTCCGGACTGAGTTAGGGTACCGTTTACACACGAGAATTCACAGCGGTTTGAGGCCTTTTAAATGTGAGGAGTGCGAGGAGAGTTTCATATCAGCGTCGAGACGCTCTGATCATATGAAGAGACGACATAAGAGTGTGAAAGACATGGCTCATGGTTGTGAGCAGTGCTTGGCTCGATTCATCAGGCCTTGGGAACTGAAGAAGCATTACAAGCTCTCGCACAGTTCGATCATAAAAGAAGAGACCTTCTGTCCGGAGGGAGTTTGCGTAGCTTGCGCAAGCGCAGCGCTGGCCGCGGAAGAGTTCCGTCTGTTCGTCCGCAACGCCGCCTCTCTCTGGCGCCGCGCCATCACCAACCTCTCCCAAGTACCCTACGAGGCATCCGACAACGCTAAATCCGTTTGCGCGGTCGTTTCCCCCAACGTTACCGTCGACACACACAGTGATTTCGACGCCGGTGATGCGACTGAAGTGATTGATAAATTGCAGTCGAAGTTGATTAAGAAACACACGAGAAAACCCCGCGTTCTCCGCGCCGGGCCCAATGTAACCTGCCCTGATTGCAATAAGCAGTTCTCAGGTCCCCATTTACTGCAAACCCATCTACAGAACAGCGATAGGAAAGACGCTTGTGGAATTTGCGGCGCCGTTGTAGCTAAAGGTGCTGGGTTAAAAAATCATTTGGCTACCGTGCATAGAGAACCAGCTATCCTGTGCAAAGAATGCCCGACAGTTGTGAGCAACGAAGCCGAGCTCAAAGCACATGCAAACTTAGCTCATAAACCTGGGGCACTAAACTGCACCGCTTGCGGCAGGACCTTTACCCGCAAAGCCTCTTACGAAACACATATCCAAATTCACGTCGTCTTGACTTGCAGACTTTGCGGCACCCAATTCTCTAACAGAAGCTGCTTCCGCCAGCACAGATCCTTTTGCGAACCCAACGCAAAACCAAAATCCGTCCCCCGCATACGCCGTTCCAATAACCGCGATCCCGGTCAATATGTGTGCGATTATTGTCAAAAGATGTACAGCTCTCGTCCGCAATTGAAGAACCATATACTCTGGATCCATCTGGACCATAGACCGCATCAGTGCTCCTTTTGCGGGAAGCGATTCTACACATCAACGAGGTTGAATGAGCACACCGTTGTCCACACGCGAGTTAGAAACTTCGAGTGTGATCTATGTGACGCGAAACTAGTGTCGAAAAGTGCAGCGATTTACCACAGACGAAGGCATACTGGGGAGAAGCCGTACGTTTGCGACGACTGTGGAGCTGCCTTTATATCCTCATCGAGGAGGCTAGAACACGCTAAACGGAAACATAACAAAGGGATTCGATTCAAGTGTACCGAGTGCACCGCTAGCTTCGTGAGGAGGCGGGAGCTTGAGAAACACGTGGAGAAAAATCATAAAGGCATTGTTAAATCTGATGTATTTGAAAGTGACTTCAAGGTCGTAAAGCCTGAAGTTACTTAG
Protein Sequence: MEDGNGRNIPQQLCQQCMSDIAAFLPFLKLCKQSAEHWSFLSENLIDLSSQKIYNTAFIFVNDKIDRVTTVFEKRDRNKNKLWPVITKRMNQLESSRRTQESNYDTQMKPGKFFYICVECGVKFRRLKNINNHLANQKKRFCRHCYSKIKTLPREETKTDADAWFQVDYGPALPPGLCSACADDVISAAKFRQLTNKSAKCWSEAARYLSQIDSESNDTKTLLYVYEEHTLIFYEKRAKSVQSAVTTLCNFEKESTINKRKSTACPFCDKRVISVQNLNQHLKNSSKRMCICGLIMDKSELCKHLRETHKIEVFECSICHEQFQSDAVLKWHITKSHGPKSFYCEHCGSGYRNERALRAHYYTHTLFDCSACGRTFENIRCYRHHKTICKLKHKNDFSIFECNDCGQQYDKKGSLRVHVIQKHLNVLPYVCQICGKQTSTLSHLRSHSKVHDADRKTLECHCGAKFRTELGYRLHTRIHSGLRPFKCEECEESFISASRRSDHMKRRHKSVKDMAHGCEQCLARFIRPWELKKHYKLSHSSIIKEETFCPEGVCVACASAALAAEEFRLFVRNAASLWRRAITNLSQVPYEASDNAKSVCAVVSPNVTVDTHSDFDAGDATEVIDKLQSKLIKKHTRKPRVLRAGPNVTCPDCNKQFSGPHLLQTHLQNSDRKDACGICGAVVAKGAGLKNHLATVHREPAILCKECPTVVSNEAELKAHANLAHKPGALNCTACGRTFTRKASYETHIQIHVVLTCRLCGTQFSNRSCFRQHRSFCEPNAKPKSVPRIRRSNNRDPGQYVCDYCQKMYSSRPQLKNHILWIHLDHRPHQCSFCGKRFYTSTRLNEHTVVHTRVRNFECDLCDAKLVSKSAAIYHRRRHTGEKPYVCDDCGAAFISSSRRLEHAKRKHNKGIRFKCTECTASFVRRRELEKHVEKNHKGIVKSDVFESDFKVVKPEVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00704256;
90% Identity: -
80% Identity: -