Basic Information

Insect: Eupithecia pulchellata
Gene Symbol: -
Assembly: GCA_963931895.1
Location: OZ007536.1:12513796-12517028[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4e-08 2.8e-06 28.0 2.2 1 23 178 200 178 200 0.99

2 16 0.0012 0.085 13.9 4.0 1 23 206 228 206 228 0.95

3 16 6.8e-05 0.0048 17.9 0.3 2 23 234 256 234 256 0.95

4 16 7.2e-07 5.1e-05 24.1 0.3 2 23 263 284 262 284 0.97

5 16 3.1e-07 2.2e-05 25.2 1.0 1 23 290 312 290 312 0.98

6 16 0.00072 0.051 14.6 3.1 1 23 318 340 318 340 0.97

7 16 2.1e-05 0.0015 19.4 3.3 1 23 346 368 346 368 0.96

8 16 2.9e-05 0.0021 19.0 0.2 1 23 374 396 374 396 0.99

9 16 8e-06 0.00057 20.8 3.8 1 23 402 424 402 424 0.97

10 16 7.2e-08 5.1e-06 27.2 1.7 1 23 430 452 430 452 0.99

11 16 4e-07 2.8e-05 24.9 1.4 1 23 458 480 458 480 0.99

12 16 9.4e-06 0.00067 20.6 0.6 1 23 486 508 486 508 0.98

13 16 1.4e-06 9.9e-05 23.2 0.5 1 23 514 536 514 536 0.98

14 16 2.4e-06 0.00017 22.4 3.0 1 23 542 564 542 564 0.98

15 16 3e-08 2.1e-06 28.4 1.1 1 23 570 593 570 593 0.98

16 16 1.4e-06 9.6e-05 23.2 0.7 1 23 599 621 599 621 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4e-08	2.8e-06	28.0	2.2	1	23	178	200	178	200	0.99
2	16	0.0012	0.085	13.9	4.0	1	23	206	228	206	228	0.95
3	16	6.8e-05	0.0048	17.9	0.3	2	23	234	256	234	256	0.95
4	16	7.2e-07	5.1e-05	24.1	0.3	2	23	263	284	262	284	0.97
5	16	3.1e-07	2.2e-05	25.2	1.0	1	23	290	312	290	312	0.98
6	16	0.00072	0.051	14.6	3.1	1	23	318	340	318	340	0.97
7	16	2.1e-05	0.0015	19.4	3.3	1	23	346	368	346	368	0.96
8	16	2.9e-05	0.0021	19.0	0.2	1	23	374	396	374	396	0.99
9	16	8e-06	0.00057	20.8	3.8	1	23	402	424	402	424	0.97
10	16	7.2e-08	5.1e-06	27.2	1.7	1	23	430	452	430	452	0.99
11	16	4e-07	2.8e-05	24.9	1.4	1	23	458	480	458	480	0.99
12	16	9.4e-06	0.00067	20.6	0.6	1	23	486	508	486	508	0.98
13	16	1.4e-06	9.9e-05	23.2	0.5	1	23	514	536	514	536	0.98
14	16	2.4e-06	0.00017	22.4	3.0	1	23	542	564	542	564	0.98
15	16	3e-08	2.1e-06	28.4	1.1	1	23	570	593	570	593	0.98
16	16	1.4e-06	9.6e-05	23.2	0.7	1	23	599	621	599	621	0.98

Sequence Information

Coding Sequence: ATGTACTATATTCAAAACAAATATCCTCAAGAAGTTTACCAGAGGTTTACTGGAAGTTTGGTTGTGCCCGGAGACAACAGGCCCAGCACAGTGTGCTACCTGTGTGACGCACAGTTAGTGAGATGCTGGAGGTTCTTTGACATGTGCCAGAAGTCAGACAAGATCTGCACAGATCTGTATCGGAACAACTCAGAGGTGTCACAGGAGAGTATAGCTAAGCAGAATCTGGGGATATACAACTTGTCCACAACACCAGTTACATTAGTAACTTATATAGAAGAAACTGAAATCACTGTTAAAGAAGAAGACACTTCAGATGATGAAGTGCTGATGCCCATGTTCGTTGAAGAAATCAAAAATGAATGCAATTTGGTTCATAGTGATGAAACTATTGATGATAAATCTATGACAACAACCATACAGGAGAACTCAAATGGAAATTGCAATGAAAAAGACAGTAATAGTAGAAAAAGatacaaaacaaaatctaaaataaaacaagaaaccCGTAGAGGCAAAGTAGCTACAATATTTAAGTGTGATGTTTGTCAAAAGCCATTTACAAAGAGTTCATACTTGAAAAGGCACATGAGAGTACACACTGAGGAAAAGCCATATTCTtgcaaaatatgcaaaaagactTACACTTGTAAAGATTCATTAAAAACTCATATGGTTGGACATACCACTGAGATGCCCACCTGTGATGCCTGTGGCAAAAGTTTTGCTACAAAAACTGTTCTCAATAGACACATTATGCAAGTACACTCCGGACAGAAGCCAATGGAATGTAAAGTTTGCAATAAATCATTTCCTGTCAAGGATAGTCTACGGGCGCATATGAAAATTCACGTTGGATACAAGCCATTTGTCTGCAATGTCTGTGGAAAAACGTTTTTTGACAAAAGTCAATTGAAAGTACACAACAGAATACATTCTGGAGAAAAGCCATTCACATGTGACTTGTGCAACAAGTCCTTTACTCAAttaactatattaaaaagtcaTATGCATCTTCACACCGGAGAGAAGCCTTATGTTTGTAAAATATGCAATAAGTCATTTCGACATCGATCCACTTTGGCCTATCATTCGCAACTGCACACCGGTGGTAAGCCATACACATGCCCTATATGCAACAGTGTCTTCGATCTGAAGCCGCTATTACGCAAGCATATGGCGACCCACACAGACAATACCTCCCATGTTTGCAAAGTTTGTAACAAAGCATTCATCCAAAGTGTTTGTCTAAGGAAGCACATGAAAATTCACACCGAGGAGAGACAATATACGTGCAATGTATGCGGCAAATCCTTCTTCAGGAGCACTGGATTAAACAACCATATGAAAACACACACCGGAGAAAAACCATACACATGCAATATGTGCGGGAAATCATTCTCTCTTAACTCGACTTTGGTGAAACACAAGAGAATACACACGGGCGAGCGGCCCTACTCCTGCGACGTGTGCAGCAAGCGGTTCCGGCTCAGCGGCGCGCTGAGTAGGCACATCAAAATGCACACCGGAGAGAAGCCATTCACTTGCAACATTTGCAGCAAGTCATTCATCGGGAGCGGAGAATTGAAAAAGCATTTGAAAGTACACAGCGAAGAAAAGCCATACACTTGCTACACTTGTACGAAGTCTTTCAGAgataaaaagtccttaaaagtTCATATAAGATTGCACACTGGAGAGAAGCCGTACACATGCAGTGTCTGTGGTAAATCATTTACTCAGAGCAGTAGTCTGAGTATGCACATGAAGAGAGTCCACAGTGAAGACAAGCCTTACAGCTGCACTGTTTGTGGGAAATCCTTTTCAGTCAATTATATTTTGACCAAGCATATGAGAATTCACACTAAAGAGGAGCCACAGTAG
Protein Sequence: MYYIQNKYPQEVYQRFTGSLVVPGDNRPSTVCYLCDAQLVRCWRFFDMCQKSDKICTDLYRNNSEVSQESIAKQNLGIYNLSTTPVTLVTYIEETEITVKEEDTSDDEVLMPMFVEEIKNECNLVHSDETIDDKSMTTTIQENSNGNCNEKDSNSRKRYKTKSKIKQETRRGKVATIFKCDVCQKPFTKSSYLKRHMRVHTEEKPYSCKICKKTYTCKDSLKTHMVGHTTEMPTCDACGKSFATKTVLNRHIMQVHSGQKPMECKVCNKSFPVKDSLRAHMKIHVGYKPFVCNVCGKTFFDKSQLKVHNRIHSGEKPFTCDLCNKSFTQLTILKSHMHLHTGEKPYVCKICNKSFRHRSTLAYHSQLHTGGKPYTCPICNSVFDLKPLLRKHMATHTDNTSHVCKVCNKAFIQSVCLRKHMKIHTEERQYTCNVCGKSFFRSTGLNNHMKTHTGEKPYTCNMCGKSFSLNSTLVKHKRIHTGERPYSCDVCSKRFRLSGALSRHIKMHTGEKPFTCNICSKSFIGSGELKKHLKVHSEEKPYTCYTCTKSFRDKKSLKVHIRLHTGEKPYTCSVCGKSFTQSSSLSMHMKRVHSEDKPYSCTVCGKSFSVNYILTKHMRIHTKEEPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705647;
90% Identity: iTF_00696641;
80% Identity: iTF_00702552;