Basic Information

Gene Symbol
stc
Assembly
GCA_963662085.1
Location
OY759183.1:12652873-12666457[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 2 2.8e+04 -4.4 1.6 15 19 574 578 573 578 0.81
2 14 0.13 1.9e+03 -0.3 0.6 4 10 607 613 606 613 0.93
3 14 4e-05 0.56 10.9 18.1 4 19 621 636 619 636 0.93
4 14 0.0011 16 6.3 6.9 1 18 672 689 672 690 0.89
5 14 2.5e-05 0.36 11.5 13.0 1 18 731 748 731 749 0.98
6 14 8.1e-07 0.011 16.3 9.8 1 19 790 812 790 812 0.88
7 14 2 2.8e+04 -5.4 2.2 6 10 842 846 842 846 0.94
8 14 0.0023 32 5.3 6.7 1 12 852 863 852 863 0.94
9 14 0.27 3.7e+03 -1.3 0.9 4 10 867 873 866 873 0.89
10 14 7.9e-09 0.00011 22.7 15.8 1 19 879 897 879 897 0.99
11 14 0.36 5.1e+03 -1.7 3.2 11 18 926 936 925 937 0.77
12 14 0.00072 10 6.9 9.7 10 18 944 952 941 953 0.92
13 14 1.5e-07 0.0022 18.6 13.9 1 17 989 1011 989 1013 0.83
14 14 0.0022 31 5.3 4.8 1 12 1019 1029 1019 1030 0.96

Sequence Information

Coding Sequence
ATGTCTCAGTGGAACAACTCATACACTTATAACAACCAGTATCAACAAGACTCTAATGGCTGGAACGGCGACCCTGGAAGCCAACACATGAATCAAGCTTATTACAACAGGCCAGATGCCAATGGTCAATATGTGAGTTTCAATGAATTTCTAAATCAGATGCAAAACAGCAATACTGCTCCTCAGACTAACAATCAATCACCTAACTCCTTCGGCAATGTTCAATATGATAACTATTCCTCTGGTCAGTATAACTACATGCCTTCTTCATCCCAGACACAGCTCAACAATGTGAACTACGGGCCTCCAGGCATGTCCGATGAAGCCGGCCCCTACCCACAGAGCCAGTTCAGTGCCCCACCACCAGAACCAACTTACTCTAACAATGCCACATTCAAATCTAACCTTACAGCCACTGCATTAGAATTTGTTCCTAAAGGTTCTCTTCCAAGACCTTCTAGTAGCCAGAACATTCCAGAGTCTTCCAATACTTCCAAGGATGTGAGTGATGATGCTAATGAAGCCCAATCCAATTATGGTAGCTCATCAGATCGAAACTGGAGACAGAGGCCACTAAAATCTAGTGAACCAAAAGACAAACCAGTGTCTAATGGGCAACAAGATAACACTAAAGGTTATGGGCGCAACTGTGATACTTCACAACGAAACAATGGAAGCAATGGTATACATAACAGAAATGGAGACACCAGTACTGAAGTAAGCACTCATAGCAATGAACCTGATAGCAGAAATCAAGAAACAAATCTACAGAGCTACGAATCAAACAATGTGAGTCAAGAACCACGACAAAGAAACTATGATTCCAACAACAGAAATCAAGAACCACGTTCAAATAGGAATCAAGAAGCTAGgaaaagaaataataatgataGAAACCAAGATACTAGGAAAAACAATGATTCCAATAGTAGAAATAGAGATTCTTCAAATTACAATTCTAACGACAGGGGCCAAGAGTCAAGGGAGTTAGATTCAAATCGCTACGACTCTCGTAATGAACGTCGTAACCAATTAAAGGGCAACCCTAAAAATAAAGCTAAAGATGATAGAACTTTCTACAATAGTGGTATAAGTAAAGATGGTCAAGACATCAGAGGTGGTCGTGGAGAAAACTCTGGAAGGACTGATGATAGACACCGAGACAGTGATGGGTGGCCAGATGGTGCCACTAGGGATAATTATAGACGAGGGGAGGCTTCCAGGGGTGAGAGCTATGGCTCTAGAGATAATTACGGAAGAGCCGAAGGTTCTGGACGGTTGCAAAGAAACTGGGCTGGTACCCAGCGACCACGAGGGGACCGGAGGGAAGATGATGAACAGTATGCTAATAGCTACCATCAAAAAGAGGAACGAGAAAGACGAGAAAATGAGAGAACGGAAAGAGCATATGATAGGGGAGAAAGGGACAAGGGATATGACAGAGACAGGGGATTTGATAGGCAAGACAGAGATAAGCAGAAAAATATGATCAGTCCTAAATTTAAAGGCAAGCAACAGGTTGACTTCGCTAACAAAGAGATGACTCAACGTGAACGTCTCACAGACCAACTAGACAAAGGAACTCTTGAGTGCCTTGTGTGCTGCGATAGAGTGAGACTGACAGATCCTGTGTGGTCCTGCTCTAACTGTTTTCATGTGCTTCATCTTAAATGTATCAGGAAGTGGGCTATGAGCAGTGTAATTGAGGGCAAATGGCGATGTCCCGCCTGTCAGAACATTAGCAAGAAAATCCCCACAGAATACCGCTGTATGTGTGGCGCGATGCGTTCGCCTGAATATCAGCGAGGCAGCGCGGCGCATACCTGCGGCAAGGCGTGTAAGCGAGAACGGACCTGCCCGCATCCTTGCACGCTGCTCTGCCATCCAGGACCCTGTCCGCCGTGCCAGGCCACTGTTAGCAAACAATGCGGTTGCGGCGCCGAGACCCGTTCCGTAATGTGCAGCAGTAAATTACCGCAAGTCTGCGGCCGCACGTGTAGCCGCACTCTCCATTGCAACGTGCACCAGTGCGCCGCACTCTGCCACGAGGAAGCCTGCGCTCTCTGCGAAAAGACTGTCACGCAAGTATGCTACTGCCCAGCGGCCACGGAACGCACGGTACCGTGCACTCGCGAAACCGGCTGCAAGAACCAGTGGGAGTGCGAGCGTGCGTGCGGACGCATACTGGCGTGCGGCGCGCACGTGTGCCGTGCGCCGTGCCACGCGCCGCCGTGCCAGCCGTGCGCGCTGCTGCCGCAAGCCGTGCCTACATGCCCGTGCGGGAAGATGCAACTAGACACGAACGCACGCAAAACCTGCTCCGACCCGATCCCTCTCTGCGGAAATATCTGTGCCAAGCCGCTGCCTTGCGGGCCCACAAACGACAAGCACTTCTGCAAGCTAGTCTGCCATGAAGGCGCCTGCCCAGTGTGCCCTGAAACCACTTTGGTGCAATGTCGCTGTGGACACTCGAGCCGCGAGGTGCCCTGCGGTGAGCTAGCTGAAATGATCAACAATGTGCTGTGTCAGAAGAAATGTAACAAGAAGCTGTCGTGTGGCCGCCACCGCTGTCGTAGCGCATGTTGCGACGCGACATCGCACCGCTGCAGCGTGTCATGCGCGCGCTCGCTGCCGTGTGGCCTGCATCGCTGCGAGGAGTTCTGCCACACGGGGCACTGTCCGCCGTGTCCGCGCGTCAGTTTTGACGAGCTCCGCTGCGAGTGTGGCGCAGCAGTGCTGATGCCCCCCGTGCCGTGCGGGGCCCGCGCGCCTCCCTGCGAGGGGCCCTGCCCCCGCCTACGCTCCTGCAGCCACCCCCCGCACCACTCCTGCCACTCCGGGGAGTGTCCGCCCTGTGTGGTGCTCACTACTAAGAGATGTTATGGCGGACACGAGGAGAGGAAGACCATACCGTGTTCGTTAGAAGAGTTCTCGTGCGGTCTTCCGTGCGGAAAGCCGTTGCCTTGTGGAAAGCACAACTGCATCAAGACGTGCCACAAAGGACCATGCGACGCTGGCAAATGCACCCAGCCATGTTCAGAGAAGCGTCCTACGTGCGGTCACCCATGCAACGCAGCCTGCCACTCGTCGGCGGCGGAAGGCAGCGCCGGCGCCGCGTGTCCGGCGAGCGCGCCGTGCCGCGCCGCCGTGCGCGCCGCCTGCCCGtgcggccgccgcgccgcgccgcgctccTGCCACGACAACGCCAAGGACTTAGCTCGAATAATGAGTGCCCTAGCTGCGACCAAGATGCAAGAAGGCGGCGCCATCGAGATCACAGAACAGCGTCCCGCAAACATGCTCAAAACCCTGGAATGCGACGACGAGTGCCGAGTCGAAGCCCGTACACGCCAGATGGCGCTAGCACTACAGATCCGCAACCCGGACGTCTCAGCCAAACTCGCACCTCGCTACAGCGACCATCTTCGCACCACTGCGCAGAGGGAGCCGTCCTTTGCGCAGCAGATACACGACAAACTGACCGACCTCGTGCAACTTGCTAAGAAGtCAAAACAGAAGACGCGCGCGCATTCCTTCCCATCAATGAACTGGCAGAAGCGCCAGTTCATACACGAATTGTGCGAACACTTCGGCTGCGAGAGTGTGGCCTACGACGCGGAACCTAACAGGAACGTGGTCGCTACGGCTGATAAGGAGAAATCATGGCTGCCTGCAATGAGCGTGCTGGAAGTCCTGGGTCGCGAGGCAGGCAAGCGCCGCGTGCCGGGGCCCGTGCTGCGCGCGCCACCgcagaccgccgccgccgcgccctctGCCGCCAAATCCGCAAGTGGCTGGGCCACTCTAACCTCATCGAAATCCACCAACGCTTGGGCCGCCCGCAGCCAAACTCAAGTCAAGCCCGAACCCAAACCGGAACCCAAGATTGACTACTTCGATAACCCACCGGATAACTGA
Protein Sequence
MSQWNNSYTYNNQYQQDSNGWNGDPGSQHMNQAYYNRPDANGQYVSFNEFLNQMQNSNTAPQTNNQSPNSFGNVQYDNYSSGQYNYMPSSSQTQLNNVNYGPPGMSDEAGPYPQSQFSAPPPEPTYSNNATFKSNLTATALEFVPKGSLPRPSSSQNIPESSNTSKDVSDDANEAQSNYGSSSDRNWRQRPLKSSEPKDKPVSNGQQDNTKGYGRNCDTSQRNNGSNGIHNRNGDTSTEVSTHSNEPDSRNQETNLQSYESNNVSQEPRQRNYDSNNRNQEPRSNRNQEARKRNNNDRNQDTRKNNDSNSRNRDSSNYNSNDRGQESRELDSNRYDSRNERRNQLKGNPKNKAKDDRTFYNSGISKDGQDIRGGRGENSGRTDDRHRDSDGWPDGATRDNYRRGEASRGESYGSRDNYGRAEGSGRLQRNWAGTQRPRGDRREDDEQYANSYHQKEERERRENERTERAYDRGERDKGYDRDRGFDRQDRDKQKNMISPKFKGKQQVDFANKEMTQRERLTDQLDKGTLECLVCCDRVRLTDPVWSCSNCFHVLHLKCIRKWAMSSVIEGKWRCPACQNISKKIPTEYRCMCGAMRSPEYQRGSAAHTCGKACKRERTCPHPCTLLCHPGPCPPCQATVSKQCGCGAETRSVMCSSKLPQVCGRTCSRTLHCNVHQCAALCHEEACALCEKTVTQVCYCPAATERTVPCTRETGCKNQWECERACGRILACGAHVCRAPCHAPPCQPCALLPQAVPTCPCGKMQLDTNARKTCSDPIPLCGNICAKPLPCGPTNDKHFCKLVCHEGACPVCPETTLVQCRCGHSSREVPCGELAEMINNVLCQKKCNKKLSCGRHRCRSACCDATSHRCSVSCARSLPCGLHRCEEFCHTGHCPPCPRVSFDELRCECGAAVLMPPVPCGARAPPCEGPCPRLRSCSHPPHHSCHSGECPPCVVLTTKRCYGGHEERKTIPCSLEEFSCGLPCGKPLPCGKHNCIKTCHKGPCDAGKCTQPCSEKRPTCGHPCNAACHSSAAEGSAGAACPASAPCRAAVRAACPCGRRAAPRSCHDNAKDLARIMSALAATKMQEGGAIEITEQRPANMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSDHLRTTAQREPSFAQQIHDKLTDLVQLAKKSKQKTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLGREAGKRRVPGPVLRAPPQTAAAAPSAAKSASGWATLTSSKSTNAWAARSQTQVKPEPKPEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00700681;
90% Identity
iTF_00706625;
80% Identity
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