Basic Information

Insect: Eupithecia inturbata
Gene Symbol: -
Assembly: GCA_963662085.1
Location: OY759204.1:1706879-1708486[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.5e-06 0.00018 22.4 1.7 3 23 85 106 83 106 0.93

2 14 0.00089 0.066 14.3 3.5 2 23 113 135 112 135 0.95

3 14 0.032 2.4 9.4 4.1 2 23 142 164 142 164 0.93

4 14 1.4e-05 0.001 20.0 0.5 3 23 173 194 171 194 0.95

5 14 0.0001 0.0077 17.3 0.5 2 23 202 224 201 224 0.95

6 14 0.04 3 9.1 1.9 1 23 231 254 231 254 0.96

7 14 3.8e-05 0.0028 18.7 1.4 2 23 261 283 260 283 0.95

8 14 6.2e-05 0.0045 18.0 3.0 1 23 296 318 296 319 0.95

9 14 8.2e-05 0.006 17.6 0.5 2 23 331 353 330 353 0.94

10 14 2.2e-06 0.00016 22.6 1.1 2 23 359 381 359 381 0.97

11 14 0.16 12 7.3 2.2 3 23 390 411 388 411 0.90

12 14 1.2e-05 0.00088 20.2 3.2 1 23 416 438 416 438 0.99

13 14 0.0005 0.037 15.1 2.0 1 23 444 467 444 467 0.95

14 14 0.41 30 6.0 0.1 3 20 495 511 494 513 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.5e-06	0.00018	22.4	1.7	3	23	85	106	83	106	0.93
2	14	0.00089	0.066	14.3	3.5	2	23	113	135	112	135	0.95
3	14	0.032	2.4	9.4	4.1	2	23	142	164	142	164	0.93
4	14	1.4e-05	0.001	20.0	0.5	3	23	173	194	171	194	0.95
5	14	0.0001	0.0077	17.3	0.5	2	23	202	224	201	224	0.95
6	14	0.04	3	9.1	1.9	1	23	231	254	231	254	0.96
7	14	3.8e-05	0.0028	18.7	1.4	2	23	261	283	260	283	0.95
8	14	6.2e-05	0.0045	18.0	3.0	1	23	296	318	296	319	0.95
9	14	8.2e-05	0.006	17.6	0.5	2	23	331	353	330	353	0.94
10	14	2.2e-06	0.00016	22.6	1.1	2	23	359	381	359	381	0.97
11	14	0.16	12	7.3	2.2	3	23	390	411	388	411	0.90
12	14	1.2e-05	0.00088	20.2	3.2	1	23	416	438	416	438	0.99
13	14	0.0005	0.037	15.1	2.0	1	23	444	467	444	467	0.95
14	14	0.41	30	6.0	0.1	3	20	495	511	494	513	0.88

Sequence Information

Coding Sequence: ATGGAAGAAGTTTCCATAAAAACTGAGATTGAGATTGAAATCAAGCAAGAAAACCCTGAAAATGATGAAGTAAATATTGACTATACCAACGCAAAACCGGAGTATGTTGATGTAACCAACGGACTAAAAATTGAACTCAAAGAAGATTTCAGTTTTAAGGAACTCCCAGCCCTTCACATTGAGAACACTGATATAATAACTGCAGGACTCCAAGGCAAAGTCTACGAAAATGGTAAAGTCAATAGACTATTCTGCAACCTATGTGATAAATCCTTTAAAAACCGAGCTAAtctaaaaaaccatttaaaattTGTCCATTCAGATGAACATACTGTGGAATGTACACAATGCTTTCGTACATTCAAGTCCCATGGACATCTGAGTTCACACATCAGCTCAGTGCATGCTGAAGCAATCGAGGCCACATGCCATTTCTGCAGTAAAGTATTCCTCAACCAGAAGAAGCTAAAAAACCACATCTATTACACTCATCCACAGCTAACAGAGCAGGTCAACTGTACAGTGTGCTCAAAAACTTACAAATCTGCTTACAGTCTTAAAATCCACATGAAATTAGTCCACCCTGATGGTGGAAAATCTGTTCCTTGCCCGCACTGTTCCAAAGTCTTCAAAGTAGACATGCTCTTGCAACGGCATATTAAATGGAGCCACCCACTCGATGGGATGGTCTACAAATGCCAGCAATGCTTAAAAGTCCTACCATCCCTAGCTTGCtacaagaaacacatagaaAACACGCATGATTTAAATGCTAGAGTAACTTGCGAACTTTGCAAGCGCGTTTTTAAGAACAAAAAGTCTCTTGACAGACATCTTAAGAATGTACACAATGGGAAGGAAGTAAAATCCTATGTTCCGAGTCCATTCATGTGCACAGTATGTGAACGTACCTTCGAGACGAAGACATCTTTGTTCTGGCATGTGCAAAAGCATCACAGTAGTGAGACAGAGTCACCAGAATCATCCATTCATTGCGAGATATGTCAACGAAACTATTCAGATAATGCTTCCTTGCAGCGCCACTTAGCATCTGTACACTCTTTAGAAACAGCGACCTGCAAAATCTGTTCCAAGGAGTTTAAGTCACTTGTAAACTTGCAAAGTCACATGAGAATCACGCATGCACCGCCTGAGGCAAACCAAATCTGTGGTATATGTCAGAAAACGTTCAAATGTGCGTTACATCTTCGAATGCACACCTTAGCAGTCCACACGGATGGTGAATTTACTTGTGACATTTGCAGCAAAAAGTTTGCTTCTCTCAAATATTTGacgaaacataaaaaaacccaCTCGAACGCAAGAGAACACCCTTGTAAAGTATGCGGGAAAATGTTCAAAAGTCTGTTCCTAGCGAATAAGCATACAAAAAATGTTCATAATAGTGTTAAATGTTCATTCTGTGGGGTTAAACAAGCGAATATTGAGGAACATTTGGTTAAGTGTCTTAAGAAGGCGGACTGTGTTAAGTGTGGGTTAGCTTTTAAGAGTGAGGAGCTACATGACCATATTTTAAACTGTGGTTCCGAGGCTATTGAGATAAAGATCGAAGAGATCACAGAGAATTCTTCTTCAATAGATATATGA
Protein Sequence: MEEVSIKTEIEIEIKQENPENDEVNIDYTNAKPEYVDVTNGLKIELKEDFSFKELPALHIENTDIITAGLQGKVYENGKVNRLFCNLCDKSFKNRANLKNHLKFVHSDEHTVECTQCFRTFKSHGHLSSHISSVHAEAIEATCHFCSKVFLNQKKLKNHIYYTHPQLTEQVNCTVCSKTYKSAYSLKIHMKLVHPDGGKSVPCPHCSKVFKVDMLLQRHIKWSHPLDGMVYKCQQCLKVLPSLACYKKHIENTHDLNARVTCELCKRVFKNKKSLDRHLKNVHNGKEVKSYVPSPFMCTVCERTFETKTSLFWHVQKHHSSETESPESSIHCEICQRNYSDNASLQRHLASVHSLETATCKICSKEFKSLVNLQSHMRITHAPPEANQICGICQKTFKCALHLRMHTLAVHTDGEFTCDICSKKFASLKYLTKHKKTHSNAREHPCKVCGKMFKSLFLANKHTKNVHNSVKCSFCGVKQANIEEHLVKCLKKADCVKCGLAFKSEELHDHILNCGSEAIEIKIEEITENSSSIDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702229;
90% Identity: iTF_00705302;
80% Identity: -