Eint024314.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759204.1:7849241-7855823[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.022 1.6 9.9 3.7 1 21 128 147 128 148 0.93 2 13 3.9e-06 0.00028 21.8 1.4 2 23 178 199 177 199 0.97 3 13 0.0016 0.11 13.6 0.5 1 23 205 228 205 228 0.97 4 13 2.4e-06 0.00018 22.4 0.7 1 23 234 257 234 257 0.97 5 13 4.3e-05 0.0032 18.5 1.0 1 23 262 284 262 284 0.97 6 13 3.9e-07 2.9e-05 24.9 1.7 1 23 290 312 290 312 0.96 7 13 6.7e-05 0.0049 17.9 4.1 1 23 323 345 323 345 0.99 8 13 0.00024 0.018 16.1 1.3 1 23 350 372 350 372 0.98 9 13 2.1e-06 0.00016 22.6 0.9 1 23 378 400 378 400 0.97 10 13 0.00024 0.017 16.1 2.5 1 23 406 428 406 428 0.95 11 13 1.7e-07 1.3e-05 26.0 0.4 1 23 434 456 434 456 0.98 12 13 0.0089 0.66 11.2 9.8 1 23 462 485 462 485 0.97 13 13 8.5e-07 6.2e-05 23.8 4.0 2 23 491 512 490 512 0.97
Sequence Information
- Coding Sequence
- ATGTGCTATGTGTGTTACTGGCAGCTGCAGCGATGTCGGAGGTTTGTGCACATGGCGCACAGATCCAACAACATCCTGCAAGATATAGCCAGCATTGGGCTGGAGACAAAAATAGCCTCTTCAGACCATGATACTGAAGGAATTATCAAACATATTGCTGTGAAGGAGGAATCAATTGCAGAAAATCATGATGACATATTTacaactgaaaataataatgattatattCGAAGGCATGATATAGAACTCAATGATGTAGCAAAAACGGAAGACACTGCTtttgatgatgatcatgatgacaCAAAACCTCTTATAGATGAGGATAAAACATACATTTACTgcgaaataaaaaacacaacaccagaaaaagctaaaaaaaaacacacatgcAAAGCTTGTAATAAAACCTATAGAAAGAGCGAATTAGAGAAACATAAATGCATTAAAGCTAAAAAAGAAACACCTAAGAACGCAAAGGTCCCTGTGAATTTAGCAAAGAAAGTTAAAAGGAAAGCAGAACCGGAAGACTTAACTTGTGAGTCATGTAATAAGACATTCAGCGATAAATATGTATTAAGAAAACATTTACGAATACATTCAGGAGAGAAACCATACATTTGCAACAAATGCAACAGAGCTTTCCTTCTCCCATCATACTTAAAAGACCATATACTACGAACACACTCCGAGAACAAGGAATATGCATGTTCAGAATGCCCTAAGACCTTCTCCGTTAAAAACACATTATTAAAACACATAAAACGCCTACACAGTGGCAAGACCCACACATGTGATCGCTGTGCACGAGCATTTAATAACAACAGCGACTTAAAGTCCCATATGGTCGTCCACAGCAGCGAACGACCACACATCTGTCCCAATTGTGGGAAAGCTTTTAAGAGGAAGAATCAGTTAAATGAGCATATTAAGCAACATAGTGACCAGAAGCCTAAGAAGATGGAATTGTATGAATGCACCCATTGTAGTAAGAAATATACGCTGAGAGCGAGCCTCTTTAACCACATTAAGACACACACAGGCATGTTGTATACGTGCGATAGATGCGCAGTCTCCTGCCGCGACCGCAGTACTCTAAAGGTCCACATGCTGATCCACTCGGACGCGCGCCCACACTCGTGTCCCACGTGTGGGCGCGGCTTCAAGCGCAAGGGCCAGCTCAACGAGCACGCGAAGGTGCACTCGGGAGCGCGCCCGCACGCCTGCGATCTGTGTGATAAGACCTTTACGCAGAAGGGATCGCTCAACTTTCATAAGAGGGTGCACACCGGCCAGCGTCCGTACATTTGCGAGGTGTGCGGCAAGACGTTTGACAGCAAGTACAACATGGCCAAGCATCTGCGGATACACACGGGGGAGAGGCCTTATCACTGTCACAGGTGCGAGCTCAGCTTCACCCACGCCAGCAGTCTGCACGACCACACCCGGAAGTACCACGACGGAGAGAAGCTGACCTGCAACGAATGCTACAAGAGCTTCGTACACAAAAGCACGCTCAAGAAACATATGAAGATACATGCGAGggaaaaataa
- Protein Sequence
- MCYVCYWQLQRCRRFVHMAHRSNNILQDIASIGLETKIASSDHDTEGIIKHIAVKEESIAENHDDIFTTENNNDYIRRHDIELNDVAKTEDTAFDDDHDDTKPLIDEDKTYIYCEIKNTTPEKAKKKHTCKACNKTYRKSELEKHKCIKAKKETPKNAKVPVNLAKKVKRKAEPEDLTCESCNKTFSDKYVLRKHLRIHSGEKPYICNKCNRAFLLPSYLKDHILRTHSENKEYACSECPKTFSVKNTLLKHIKRLHSGKTHTCDRCARAFNNNSDLKSHMVVHSSERPHICPNCGKAFKRKNQLNEHIKQHSDQKPKKMELYECTHCSKKYTLRASLFNHIKTHTGMLYTCDRCAVSCRDRSTLKVHMLIHSDARPHSCPTCGRGFKRKGQLNEHAKVHSGARPHACDLCDKTFTQKGSLNFHKRVHTGQRPYICEVCGKTFDSKYNMAKHLRIHTGERPYHCHRCELSFTHASSLHDHTRKYHDGEKLTCNECYKSFVHKSTLKKHMKIHAREK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700321; iTF_00702217; iTF_00705298; iTF_00703241; iTF_00696660; iTF_00697617; iTF_00698515;
- 90% Identity
- -
- 80% Identity
- -