Eint025472.1
Basic Information
- Insect
- Eupithecia inturbata
- Gene Symbol
- -
- Assembly
- GCA_963662085.1
- Location
- OY759206.1:7199991-7210706[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-05 0.0068 16.7 0.0 7 35 46 73 42 78 0.88 2 3 0.45 2.2e+02 2.3 0.0 17 30 185 198 184 199 0.89 3 3 0.041 20 5.6 0.0 7 34 209 235 206 246 0.84
Sequence Information
- Coding Sequence
- ATGGACCATGGCATACCTCTGAACATCCACGCAAGACCTCGAATCGTCGGACGACGGCCAAATGCAATAGTCAATATAGAAACCGATGTCTTCCAAGAGAAATCCTACAAGCAGTATTCATCACAGCATCTCAGAGACGCGTTGATCGCAGTGAAAAAAGGTTACAGTGTGTACGCAGCGTCGAATAAGTACGGTGTGCCAAGGAAAACATTACGGAATTGGATGGAAAAGTACGATATTAAAAGCCAGTTTTCAAAAGGACGCCATTTCGCGATATCAAACGTCCAATGCCAGTACGACAGTGGTTCAGAAACAGACGCGTTTGGCGAAGCGAGGGAAGAGTTGACGGACGACCATACGTACGGGGCGCGGAGCCTCGAGAGGAGTTACGAGCCGCCAGCGTTCGTTATACGTCAGACAAATCAAGTACAAGTGGCGCCCCTTCAGTCGCTATCGGAGCTCCCGACGCTCCGGCCTAAGATGATGACGATAGGGCCCATGTTCCCCTCCGTGAATGTGATCCACGTGGGGGACCAGCCTCCTCACCCTATGACAACAGTTTCACAAGCGCAGCCCGAGTACAGCATAAACAAGCGCATCCGTCGAAGCGAGGTTGTGCTGCGACAAGCAGCGGACTGCGTGAGTCGTGGGCTCACGTTCCAGACTGTGTCCGAGCAGTTCAACATACCTATATCTACCATCAGATTTTTCATGGCTAGAAAAGGAATATTACCGAGACGACGGCGGGGCAGGACTACACAGGCCGCTGCATCTTCAAGTCCGGAGCCTCCATTCCACATGCAGCACTTCAAGCTGCCGCGTTCCGTCGGTCTcaaagctgatgatgatgaagatgacaCTTAG
- Protein Sequence
- MDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRHFAISNVQCQYDSGSETDAFGEAREELTDDHTYGARSLERSYEPPAFVIRQTNQVQVAPLQSLSELPTLRPKMMTIGPMFPSVNVIHVGDQPPHPMTTVSQAQPEYSINKRIRRSEVVLRQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPRRRRGRTTQAAASSSPEPPFHMQHFKLPRSVGLKADDDEDDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361566;
- 90% Identity
- -
- 80% Identity
- -