Eins001952.3
Basic Information
- Insect
- Eupithecia insigniata
- Gene Symbol
- -
- Assembly
- GCA_947859395.1
- Location
- OX402012.1:2775775-2778456[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-08 5.2e-06 26.5 0.0 1 35 15 49 15 55 0.93
Sequence Information
- Coding Sequence
- ATGCCGAAAGTTACGGATGGAAAAAAATATACAAAAACATATACAGAAGAAGATGTAGAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGCTGCAAATAAATTTAATATCCCACGAGCAACTTTGCAGTTTCGCCTATCCAACCAATTTGTCAAAAGTCGACCTGGTCCAGATACAGTTCTGTCTAGTGCAGAAGAACAAGAGATAGTTAAATGGATAATTGCAGCTTGTAGAAAAGGATTTCCACGGCTTAAAGAGGATGTCATAAAGAGCGTCAAACTGTATTTAGATGAACATCCCAGACCAAACAATTTTATAGATAATAAACCAGGCGAGGGATGGTATAAACTGTTTTTGAAGAGGCATCCTGAGCTTTCTATACGAACATCAGAGGCTGTAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGAAACTGGTTTACACAAGTAGAAGAATATCTAAAAGAAAATGATCTCTttcatattttgagtgatccatctagagtttataatggggatgaaacgaattttattttatgcccaaagaacaccaaagttatcgctttaaagggaaccaaaaatgtatatgaggttgatcacgctcaggctaaatcatgtgttactgtaatgttcacattttcggcggatggtgtaacaacactacctatgattatttaccccttaaagagaatgcgacctgaaattcaaaagtctgcgcctagcgattggggtataggcttgtcagataatggatggatgaaggccgagctcttcatccagtacatacagaatgttctccatccagcgctggtaaagatgaatatcacttttccagtaattctttttttggatggacataaaagccacacaacacttcagcttactcaactttgtcaaaatcttggtataatacttatagctctataccctaacgcgacacggattttacaaccagcagacgtagcggcctttcgcccaataaaagtaatgtggcgtaaagcagtcctagaatggcgaacagacaacttaacaaaatccttactaaaaacagatgttgcacctATATTGGAGAAGCTTTTACCCAAATTAAATAAGACGACGTTGAAGAACGGCTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGATCACGTAGACTACACAAAATGTTTAATGCCCTATAAACCAGTCCTAGAAATTTTGGATGACAACTGTTCTACAAGTCTTAACTATCAGACATTTGAAGAAATAGTTGGAGCACAGTTAATCAGAAAGATGAAAAATCAGGTGGTAGGAAAATCAATAGAAGCTAAAAAGCTTCACGACTTGTATAAATATCTCGTACCAAAAATTTCAACACACGAGTTATCGTCGCAAACAATAGAAACAACTTCTGAGGAACTAATGCAACACAAGGACAGGAGCAATTTAAATGAACAAAACGACGACGTTTCAGAAGATTTGACCACAATGGCAGCCCTCAATGAATTAACGACAATGCCAACAGAAATAGAACGTTTTCCAAATGAACCAGAACTGTCAACTCATGAATCTCAATCCAAAGAAACTGGCACTTCTAAAACAAACACGATGGTTGACAATTATTCAGGAACCTCAGGATCAGGACACGAAAAACTTCTGAATGTTGAACTTCAGCATCAGGGGATTGAGGAATTACCTTTGGCATCCTGTATAAATCTTACATCGACAAACGATTCAGTATCAGAAGCTGTAAAAACGGTTGAGGTTATTTCTGAGTGTGAAAGAGAAAAACAAACATCATTATATGTAATACCTATTCCATCCACCAGTCGTCAAAGTGTAGAGCTGATTGGAGACAACTGGGTACTAGTGGATGACATGCCAACCGAAGTCCCTTCAAAGAGTCCAATAAAGAAACAAAATATAAAAGATTTTTTAAAGTTGCCAAAGACTCCAATTAAAACACAAAAAGCTGACGAACTTAAACCTCCTAACATAACTTTCCGAGATTCAAGGGAAACTGGAAATGATAAGAAGATAAAAGTTAAAGTAAACAGATTGAGACGAATGACAAATGAAGAATTGTTAAAAATGTTGGAAGATGATTAA
- Protein Sequence
- MPKVTDGKKYTKTYTEEDVEKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKSRPGPDTVLSSAEEQEIVKWIIAACRKGFPRLKEDVIKSVKLYLDEHPRPNNFIDNKPGEGWYKLFLKRHPELSIRTSEAVTSASSKLSEKQIRNWFTQVEEYLKENDLFHILSDPSRVYNGDETNFILCPKNTKVIALKGTKNVYEVDHAQAKSCVTVMFTFSADGVTTLPMIIYPLKRMRPEIQKSAPSDWGIGLSDNGWMKAELFIQYIQNVLHPALVKMNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTDNLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDHVDYTKCLMPYKPVLEILDDNCSTSLNYQTFEEIVGAQLIRKMKNQVVGKSIEAKKLHDLYKYLVPKISTHELSSQTIETTSEELMQHKDRSNLNEQNDDVSEDLTTMAALNELTTMPTEIERFPNEPELSTHESQSKETGTSKTNTMVDNYSGTSGSGHEKLLNVELQHQGIEELPLASCINLTSTNDSVSEAVKTVEVISECEREKQTSLYVIPIPSTSRQSVELIGDNWVLVDDMPTEVPSKSPIKKQNIKDFLKLPKTPIKTQKADELKPPNITFRDSRETGNDKKIKVKVNRLRRMTNEELLKMLEDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00783393; iTF_00869569; iTF_00700966; iTF_00700967; iTF_00700975; iTF_01161295; iTF_00074450; iTF_00704937; iTF_00895857; iTF_00012953; iTF_00236569; iTF_01264475; iTF_00697277;
- 90% Identity
- iTF_00895857;
- 80% Identity
- -