Acro020538.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anania crocealis
Gene Symbol
-
Assembly
GCA_949315895.1
Location
OX438870.1:14467662-14470250[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-08 2.5e-05 25.2 0.0 2 35 16 49 15 55 0.92

Sequence Information

Coding Sequence
ATGCCAAAGGTTACggatggaaaaaaatatacaaaagcaTATCCAGAAGAAGATGTACAAAAAGCCTTGCAAGCCATAAAAAATGGAATGGGTAAGAAAACTGctgcaaataaatttaatatcccACGAGCAACTTTGCAGTTTCGCCTATCCAACCAATTTGTCAAAAGTCGACCTGGTCCAGATACAGTTCTATCTAGTGCAGAAGAACAAGAGATAGTTCAATGGATAATGGCAGCTTGTAGAAAAGGATTTCCACGGCGTAAAGAGGATGTTATAAAGAGCGTCAAACTATATTTGGATGAACATCCCAGACCAAACAGTTTTATAGATAATACACCAGGCGAGGGATGGtataaactatttttgaagaggCATCCTGAGCTTTCTATACGCACATCAGAGGCTGTAACTTCAGCAAGCTCAAAGTTGTCAGAGAAGCAAATTAGATACTGGTTTACACAAGTAGAAGAATATCTAAAAGAAAATGATCTCTTTCATATTTTGAGTGATCCATCTAGAGTATACAATGGGGATGaaacgaattttattttatgcccAAAGAACACCAAAGTTATTGCTTTAAAGGGAACCAAAAATGTGTATGAGGTAGATCACGCTCAGGCTAAGTCGTGTGTAACTGTAATGTTCACATTTTCGGCGGATGGTGTAACAACACCACCTATGATTATTTACCCCTTAAAGAGAATGCGACCTGAGATTCAAAAGTCCGTGCCTAGCGAGTGGGGTATTGGCTTGTCAGATAATGGATGGATGAAGGCCGAGCTTTTCATCCAGTACATACAGAATGTTCTGCATCCAGCgctaataaaaatgaatataacTTTTCcagtaattctttttttggatGGACATAAAAGCCACACAACACTTCAGCTTACTCAACTTTGTCAAAATCTTGGTATAATACTTATAGCTCTATACCCTAACGCGACACGGATTTTGCAACCAGCAGACGTAGCAGCGTTTCGCCCAATAAAAGTAATGTGGCGTAAAGCAGTCCTAGAATGGCGAACagaaaacttaacaaaatcCTTACTAAAAACAGATGTTGCTCCTATATTGGAGAAGCTTCTACCCAAGTTAAATAAGACGACGTTGAAGAACGGCTTTGAAGCTTGTGGTTTATGCCCATTTAATCCAGATCAAGTAGACTACACAAAATGTTTAATGCCCTATAAGCCAGTCCAAGAAATTTTGGATGAAAACTGTTCTACAAGTCTTAACTATCAGACATTTGAAGAAATAGTTGGACCACAGTTAATTAGAAAGATGAAAAATCAGCTGGTAGGTAAATCAATAGAAGCTAAAAAGCTTCACGACTTGTATAAATATCTCGTACCAAAAATTTCAACACACGAGTCATCGACGCAAATAATAGAAACAACTTCTAAGGAACTAATGCAACACAAGGACAGGAGCAATTTAAATGAACAAAACAACGATGGATCAGAAGATTTCACCGCAATGGCAGCCCTCAATGAATTAACGACAATGCAAACAGAAGAACTTTTGCTAGTACCAGAACTGTCAACTCATGAACCTCAATCCAAAGACACTGACATTTCTAAAACAAACACGATAGTTGACGATTATTCAGGAACCTCAGGACACGAAAAACCTCTGAATGTTGACCTTCAGCATCAGGGGATTGAGGAATTACCtttaacatcctgtataaatctTACATCGACAAACGATTCAGTACCAGAAGCTGTACAAACGGTTGAGGTTATTTCTGAGTGTGAAAGAGAAAACCAAACACCAATATATGTGATACCTATTCCATCTACCAGTCGTCAAAGTGTAGAGTTGATTGAAGAAAAATGGGTACTAGTGGATGACATGCCAACCGAAGTCCCTTCGAAGATTCcaataaagaaacaaaatataaaagattttttaaagttaccAAAGACTccaattaaaacacaaaaagctGGTGTAGAACATCGCTCTTTTGTTTTAACAAGTAAGGATTGGGAAGCTGTAGAACtagaaaaacaacaaaaaaagatgAAAGAGATACAAGAAAAGGAGAACAAACGAATTGCAAGACTAGAAAAAGCCAAAGAGAAACGCTTACTCAAGGAAAAAAAACAAGCTGacactataaataaaaagaacaaagccaaaaatttaaatttaattaagaaaagtAAACCAAATTCTGATagtatcaaatcaaaaattgtTATCCAATCAAACGTCTTAATTAAACCTGCAAATAGAATCTCAAGTGATATTGAAGAAGAAACAGAATATACAAAGGAACTAAAAAAAGAACCTTTGAACGAAGTTAAACCTGTAAATATTACTGCCCtgaaggaaataaaaaacagacCAATTTTAGATGCAGTTGAAGCTGCTAATGAAAGAACCTTTAAAGAATCGGAACAAGTACAGATGGtcaaaaaagaatttaaaaaaggaccAATTTCAGATGAACTTCAACCTCCGAACATAACTTTCCGAGATTCAAGGGAAACCAGAAAAGATAAGAAGATGAAAGCTAAAGTAACTAGATTGACAGATGAAGAATTGTTAAAAATGTTGGCAGATGATTAG
Protein Sequence
MPKVTDGKKYTKAYPEEDVQKALQAIKNGMGKKTAANKFNIPRATLQFRLSNQFVKSRPGPDTVLSSAEEQEIVQWIMAACRKGFPRRKEDVIKSVKLYLDEHPRPNSFIDNTPGEGWYKLFLKRHPELSIRTSEAVTSASSKLSEKQIRYWFTQVEEYLKENDLFHILSDPSRVYNGDETNFILCPKNTKVIALKGTKNVYEVDHAQAKSCVTVMFTFSADGVTTPPMIIYPLKRMRPEIQKSVPSEWGIGLSDNGWMKAELFIQYIQNVLHPALIKMNITFPVILFLDGHKSHTTLQLTQLCQNLGIILIALYPNATRILQPADVAAFRPIKVMWRKAVLEWRTENLTKSLLKTDVAPILEKLLPKLNKTTLKNGFEACGLCPFNPDQVDYTKCLMPYKPVQEILDENCSTSLNYQTFEEIVGPQLIRKMKNQLVGKSIEAKKLHDLYKYLVPKISTHESSTQIIETTSKELMQHKDRSNLNEQNNDGSEDFTAMAALNELTTMQTEELLLVPELSTHEPQSKDTDISKTNTIVDDYSGTSGHEKPLNVDLQHQGIEELPLTSCINLTSTNDSVPEAVQTVEVISECERENQTPIYVIPIPSTSRQSVELIEEKWVLVDDMPTEVPSKIPIKKQNIKDFLKLPKTPIKTQKAGVEHRSFVLTSKDWEAVELEKQQKKMKEIQEKENKRIARLEKAKEKRLLKEKKQADTINKKNKAKNLNLIKKSKPNSDSIKSKIVIQSNVLIKPANRISSDIEEETEYTKELKKEPLNEVKPVNITALKEIKNRPILDAVEAANERTFKESEQVQMVKKEFKKGPISDELQPPNITFRDSRETRKDKKMKAKVTRLTDEELLKMLADD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00700044;
90% Identity
iTF_00895857;
80% Identity
-