Eexi000540.1
Basic Information
- Insect
- Eupithecia exiguata
- Gene Symbol
- znf711
- Assembly
- GCA_947086465.1
- Location
- OX352255.1:1927740-1936756[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.87 56 4.8 2.0 1 23 196 219 196 219 0.92 2 11 1.7 1.1e+02 3.9 0.2 2 23 227 247 226 249 0.87 3 11 2.7 1.7e+02 3.2 2.4 2 23 252 274 251 274 0.89 4 11 0.0079 0.5 11.2 4.9 1 23 284 306 284 306 0.98 5 11 0.00089 0.057 14.2 0.1 2 20 311 329 310 330 0.95 6 11 3.6e-05 0.0023 18.6 4.0 1 23 394 417 394 417 0.97 7 11 0.026 1.7 9.5 6.4 3 23 424 444 423 444 0.97 8 11 2.5e-05 0.0016 19.0 0.1 1 23 455 478 455 478 0.94 9 11 1.3e-05 0.00084 19.9 2.9 1 23 484 507 484 507 0.95 10 11 0.00028 0.018 15.8 0.1 3 23 518 538 517 538 0.98 11 11 6.8e-05 0.0043 17.7 0.5 2 23 545 567 544 567 0.95
Sequence Information
- Coding Sequence
- ATGAATGGTCACAAGATTTGTTGCTGCTGTTTGTCAGAGAGTAATATTATGGTCGGCCTCCAATACTGCACACATGCTGATTTTTTACATAACTTTCCACAGATGGATCCGTCGCGAAAGACTGTGTGCTTGTTCTGCCACAGTATGCTGGAGAAAATAAAGATTTTTCGAAAACAAATCATAGATAGCACCATAGTTTTACAAAATCAGCTACCCCACATTCTACCAACAAAGTTGCATAAACTACAAATAACCGACATAAAAACAACTTCTAAATCTGAATTTCAAGACGAAAATGCTACAGATGAAGTAACTCTGAAATTAGAACTGGAACCGACCACAAGTTCATTAGCATTCGAAACGGAAGTAAAGATTGAGCATAATTCGAGTTCAGAAAGTGAAGATAATACACCGCTATGTGTAGAAGAAGACATCAAGGATGATGGTAAAAATAAAAAATGTAAACAGACACATGAAGATGATGACAAATACAAAGGGAAGATACTGATCTACAATTTAACAAGAGAAGAGTTAGAGGAAGAAAGAGATATAGAGATGAAGAAGGCGACTTACTTAAAACTTCCTTACAAATGTCAAAGTTGTATCAAAGGATTTGATCATGAGATCACTTTGATGAAACACAATGATAAACAACATCGACAGAAAAAAGGTGGGATTCAATGTGACGTCTGTAAAACTATTCTGGTGCCACTTTCATACAAGGAGCACATTCGAAGACATTACAGAAGGCTTCAATGTGTGATGTGCGGGAAGCGAACCCATGACATCTATTCCATCTCTCATCACTTCAACCAGGAGCATAGCGAGGCTGGGCTCATTCCTCACCAGTTTCAATGCAGTGACTGCGATTTCACCTGTAGTTCCAATCGCGCCTATCGCTATCACCGTGACAAACATAAGCAGAAATCACAATGCACCAAGTGCGGCAACACTTACGTCAACGCGACAACACTACGCGTGCATATGCTTCCACTGCTGGACGTAGGCCTTCCTCTGATGATCGCCTTTTTGACTTTTATGTCATGGGTGGTAATGCCTATAATCCCCACGCTAGACATCCGCGTTGGGGAGCGGATATCGCAGTTCTGTGGTAGATCTATTCTGCAAGAGATGCTGCTGTCCACCCCCCGAAACGTGCACGATCAAACAACAGGGAAATACAAATGCTCGCAATGTGACAAGTCGTACTGCAGTAAGTCGGGTCTCTTCAGCCACCGTTCTTCAGCGCACTCGGATAGCGGCGCGTACTGTGCGGAGTGCAAGAGCCACTTCCGGACCAAGCACGGCCTTGCACATCATCTCAACACACATTCTAAGCATGTAGATGTAAACCGCAAAAGATTTGAATGTGCTGACTGCGACGCCAAGTTTATTAGGAAGTCGTCACTCCAAGAGCACATCGACTGGACTCATCTAAAGAACGTCGTCCATCAGTGCAGTCAATGCGATAAGGTGTTCAAAAGTGTTAAGTCTTTGAAGAAGCACATAAGTTACGTGCACGAGAAGAAGCGACCTCCGCGGGACAAGATCTGCGATTATTGTGGGCGAGGGTTCACGACTATCCCGATCCTTCGCAATCACATCCGAACACACACGGGGGAGCGCCCGCTGACCTGCCCGCACTGCGACGCTACCTTCGCGCAGTCCGCCTCCCTCTACACGCACACCAAACTTGTTCATAAGCACTCTACAGCTAACCACTGA
- Protein Sequence
- MNGHKICCCCLSESNIMVGLQYCTHADFLHNFPQMDPSRKTVCLFCHSMLEKIKIFRKQIIDSTIVLQNQLPHILPTKLHKLQITDIKTTSKSEFQDENATDEVTLKLELEPTTSSLAFETEVKIEHNSSSESEDNTPLCVEEDIKDDGKNKKCKQTHEDDDKYKGKILIYNLTREELEEERDIEMKKATYLKLPYKCQSCIKGFDHEITLMKHNDKQHRQKKGGIQCDVCKTILVPLSYKEHIRRHYRRLQCVMCGKRTHDIYSISHHFNQEHSEAGLIPHQFQCSDCDFTCSSNRAYRYHRDKHKQKSQCTKCGNTYVNATTLRVHMLPLLDVGLPLMIAFLTFMSWVVMPIIPTLDIRVGERISQFCGRSILQEMLLSTPRNVHDQTTGKYKCSQCDKSYCSKSGLFSHRSSAHSDSGAYCAECKSHFRTKHGLAHHLNTHSKHVDVNRKRFECADCDAKFIRKSSLQEHIDWTHLKNVVHQCSQCDKVFKSVKSLKKHISYVHEKKRPPRDKICDYCGRGFTTIPILRNHIRTHTGERPLTCPHCDATFAQSASLYTHTKLVHKHSTANH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00704356; iTF_00703340; iTF_00705407; iTF_00706357; iTF_00700403;
- 90% Identity
- -
- 80% Identity
- -