Basic Information

Insect: Eupithecia exiguata
Gene Symbol: -
Assembly: GCA_947086465.1
Location: OX352256.1:4129671-4132031[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.33 21 6.1 0.7 2 23 2 24 1 24 0.92

2 19 0.13 8.3 7.4 0.1 2 23 49 71 48 71 0.96

3 19 1.4 90 4.1 2.0 2 23 94 115 93 115 0.92

4 19 4.5e-08 2.9e-06 27.7 1.0 1 23 119 142 119 142 0.98

5 19 0.24 15 6.5 3.0 1 21 148 168 148 169 0.94

6 19 0.48 31 5.6 0.3 1 13 176 188 176 199 0.71

7 19 0.00076 0.049 14.4 0.6 1 23 206 229 206 229 0.95

8 19 0.00064 0.041 14.6 0.6 2 23 235 256 234 256 0.96

9 19 6.5e-06 0.00042 20.9 0.3 1 20 262 281 262 284 0.94

10 19 0.029 1.8 9.4 0.1 2 20 320 338 319 340 0.94

11 19 0.0028 0.18 12.6 0.2 2 23 370 392 369 392 0.90

12 19 0.0038 0.24 12.2 1.7 1 23 414 436 414 436 0.97

13 19 0.0084 0.53 11.1 0.0 1 23 440 463 440 463 0.96

14 19 0.35 22 6.0 0.5 2 20 469 487 468 489 0.90

15 19 1.4 90 4.1 1.8 1 23 496 519 496 519 0.89

16 19 1.5e-06 9.7e-05 22.9 1.0 1 23 526 549 526 549 0.98

17 19 0.00017 0.011 16.4 2.1 1 23 553 575 553 575 0.98

18 19 0.0023 0.15 12.9 0.2 1 19 581 599 581 601 0.97

19 19 0.0022 0.14 12.9 1.0 1 23 609 632 609 632 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.33	21	6.1	0.7	2	23	2	24	1	24	0.92
2	19	0.13	8.3	7.4	0.1	2	23	49	71	48	71	0.96
3	19	1.4	90	4.1	2.0	2	23	94	115	93	115	0.92
4	19	4.5e-08	2.9e-06	27.7	1.0	1	23	119	142	119	142	0.98
5	19	0.24	15	6.5	3.0	1	21	148	168	148	169	0.94
6	19	0.48	31	5.6	0.3	1	13	176	188	176	199	0.71
7	19	0.00076	0.049	14.4	0.6	1	23	206	229	206	229	0.95
8	19	0.00064	0.041	14.6	0.6	2	23	235	256	234	256	0.96
9	19	6.5e-06	0.00042	20.9	0.3	1	20	262	281	262	284	0.94
10	19	0.029	1.8	9.4	0.1	2	20	320	338	319	340	0.94
11	19	0.0028	0.18	12.6	0.2	2	23	370	392	369	392	0.90
12	19	0.0038	0.24	12.2	1.7	1	23	414	436	414	436	0.97
13	19	0.0084	0.53	11.1	0.0	1	23	440	463	440	463	0.96
14	19	0.35	22	6.0	0.5	2	20	469	487	468	489	0.90
15	19	1.4	90	4.1	1.8	1	23	496	519	496	519	0.89
16	19	1.5e-06	9.7e-05	22.9	1.0	1	23	526	549	526	549	0.98
17	19	0.00017	0.011	16.4	2.1	1	23	553	575	553	575	0.98
18	19	0.0023	0.15	12.9	0.2	1	19	581	599	581	601	0.97
19	19	0.0022	0.14	12.9	1.0	1	23	609	632	609	632	0.96

Sequence Information

Coding Sequence: ATGGTCTGTGTTTTCTGCTGTGAGAGTTTCGAGGATTCGTCGGTGTTCAGAAACCATATGGATATAGAGCACGAGATGTTCTCTATCTCAATTGCGTTCGCGCATTGCTCAGAAAGCTTCATAAAAGCCGACTGCACCGACATTCGGTGCCGAATCTGCAGCGAACCTTGTGTCAGTCTAGACGAAGCCGCTGTACATTTAAGAAAAGTTCACCAAAAGCCTATCGATATTTCCGCTCCGTTAGGAATACAACCGTTTGTTTTCATACCGAATACATTAAAATGCGCGCTTTGCGAGTCAAAGGCCTACAGCCTCCGACACTTAAGTAGGCACACTCAGTCTCACTTCCTAAGATTCACTTGCGAGTCATGTGGGAAGTCATTCTCCACTAACTCTACTCTCCAAGTCCACATCAGAAGCTCACACTTCAAAATTAAAGAATATCAGTGTTTCAAATGTAAATCTTGCTTCAGTACTGTTGAGGAAAAAAGAAATCATTTGAACGAGTCTTCGAAATGTCGAAAATATCTTTGCAATGTATGTGGTGAACGTTTTGTGTCTGGATTTATAAAAGAAACGCACATGAAGAATGTCCACGGAGTTGCCAGGAAGCCTCATGTTTGTCCCGAGTGCGAGTTAGTATTCACAGATAAAAAAGTTTTCGTGAGACATTTCAAAATTGCGCACACTGATGACAATATTGTTTGCTCCTTCTGCGGTCAGAAATTTGTTTCCAAAAAAGATTTCGAGGAGCACAAAGTCACGCATACGAACGAGAAGCCTTACCCTTGTACGGGTTGCGCTAAGTCTTTCTCTAGAAAAAAGAATTTAGCCCAACACATGTGGATACACAGCGAGTATAAAAGATTTGAATGTACCTCCATCCGTCGTCGAAATGCCAATCTAATTGTGCGCCACGCGACGGCATATCCGTTCAGACTGCCAAACACTTTAATGACATGTTTTGAGTGCTTAGAAACTTTTGATGAACCAGAAGAGTTTAGAAAACATATGGATTTAGAGTTTAACAATATGAGAAAACGCGGGCGTACTCTCACCAGCAGGATACAAGCCCAATACGACGTCAAAGTAGACATAACTGACCTAAAATGTAGAATATGTCACAAATCCTTCGGATCTCTTGACGACGTAGCTGCCCATTTATACGCCGTACATCGCGTTGGTATTGATTTAAACCACAAATTAGGATTACAACCATTCAAACTGTATAGGAACAATTATTCTTGTTTAATTTGCAAAGAAAAATTTCACGATCTGCGTGCGTTGAGCAGACACACGCAAGCACATTATTTAAATTACATGTGCGAGGCTTGCGGCAAAGCCTATGGAACTGAAGCAAGTGTCAGAGCGCACGCAAGAAACTCTCATGGGGAGCACAAAACATACTGTTTGAAATGTAGAAAAGGTTTCAACTCCAGCGAGGAGAAAAAGATGCACACACTAGGCTCTGAACGCTGTTGGCCATATGTTTGCAACTTTTGTGGTATACGATGCCTCTCAAAAGTTACAAAAAATAATCATATGACCGAGGAGCATGGTTACAAACCACCTCTTTACACCTGCCCTGAATGCGATATGGTTTTTACTTCGAAGTCGAATCAAAATAGACATTTCAACACAGAACACACGGATAAATACAAATGTGTTCATTGCGAAAAAAAATTCAGCGGCAGAAAGGATCTAATAGACCATACTGTCACACATACGGCTGAAAAACTGTACAACTGTGATGTTTGTTTCAAAGGTTTCTCTAGAATGAAAACACTAAGAGCCCATGCGTGGAATCATAAGGAGAAGAAACGTTTCGAGTGTAAGCCTTGTAACAAGCAGTTTAACCAGCGTGTTAGTTGGAGAACTCACATGGCTTCCTATCATCCACACCAGACTCCATAA
Protein Sequence: MVCVFCCESFEDSSVFRNHMDIEHEMFSISIAFAHCSESFIKADCTDIRCRICSEPCVSLDEAAVHLRKVHQKPIDISAPLGIQPFVFIPNTLKCALCESKAYSLRHLSRHTQSHFLRFTCESCGKSFSTNSTLQVHIRSSHFKIKEYQCFKCKSCFSTVEEKRNHLNESSKCRKYLCNVCGERFVSGFIKETHMKNVHGVARKPHVCPECELVFTDKKVFVRHFKIAHTDDNIVCSFCGQKFVSKKDFEEHKVTHTNEKPYPCTGCAKSFSRKKNLAQHMWIHSEYKRFECTSIRRRNANLIVRHATAYPFRLPNTLMTCFECLETFDEPEEFRKHMDLEFNNMRKRGRTLTSRIQAQYDVKVDITDLKCRICHKSFGSLDDVAAHLYAVHRVGIDLNHKLGLQPFKLYRNNYSCLICKEKFHDLRALSRHTQAHYLNYMCEACGKAYGTEASVRAHARNSHGEHKTYCLKCRKGFNSSEEKKMHTLGSERCWPYVCNFCGIRCLSKVTKNNHMTEEHGYKPPLYTCPECDMVFTSKSNQNRHFNTEHTDKYKCVHCEKKFSGRKDLIDHTVTHTAEKLYNCDVCFKGFSRMKTLRAHAWNHKEKKRFECKPCNKQFNQRVSWRTHMASYHPHQTP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00702244;
90% Identity: -
80% Identity: -