Eexi020944.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia exiguata
Gene Symbol
-
Assembly
GCA_947086465.1
Location
OX352235.1:4201903-4218042[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 8.8e-05 0.0057 17.3 2.2 1 23 415 437 415 437 0.97
2 23 0.00031 0.02 15.6 1.0 1 20 443 462 443 465 0.94
3 23 0.00024 0.015 16.0 5.6 1 23 484 506 484 506 0.98
4 23 0.00011 0.0069 17.1 4.1 1 23 512 534 512 534 0.99
5 23 4.1e-05 0.0026 18.4 5.3 1 23 540 562 540 562 0.97
6 23 5.8e-06 0.00037 21.0 8.4 1 23 568 590 568 590 0.97
7 23 2.6e-06 0.00016 22.2 3.0 1 23 596 618 596 618 0.97
8 23 0.00011 0.0072 17.0 6.7 1 23 624 646 624 646 0.97
9 23 2.1e-05 0.0014 19.3 6.4 1 23 652 674 652 674 0.98
10 23 0.00068 0.043 14.5 0.5 1 16 680 695 680 696 0.97
11 23 0.033 2.1 9.2 2.7 1 19 708 726 708 730 0.93
12 23 0.045 2.9 8.8 2.5 1 23 736 758 736 762 0.89
13 23 0.38 24 5.9 0.8 7 23 774 790 771 790 0.95
14 23 5.5e-05 0.0035 18.0 7.9 1 23 796 818 796 818 0.98
15 23 0.00014 0.0092 16.7 6.8 1 23 824 846 824 846 0.97
16 23 4.5e-06 0.00029 21.4 5.6 1 23 852 874 852 874 0.98
17 23 1.9e-05 0.0012 19.4 6.7 1 23 880 902 880 902 0.97
18 23 7.5e-07 4.8e-05 23.8 5.0 1 23 908 930 908 930 0.98
19 23 2.1e-06 0.00014 22.4 3.6 2 23 937 958 936 958 0.98
20 23 1.9e-05 0.0012 19.4 8.1 1 23 964 986 964 986 0.97
21 23 1.9e-06 0.00012 22.6 6.5 1 23 992 1014 992 1014 0.98
22 23 0.00049 0.032 15.0 0.3 1 23 1021 1043 1021 1043 0.97
23 23 0.18 11 7.0 6.2 1 23 1052 1074 1052 1074 0.98

Sequence Information

Coding Sequence
ATGAATCCCGAGCATCATAATATCAACACGGGCGGGGGCCAACCTCCTGGGAGTACGGAGTCTCAGAATCAAAGAGTACAGGCTCAGCAGCAGCAGCAGCAACAAGTAAGCCTGCCTGCCACCACGTCTGCCACCGACTTGCGAGTCAACTCAGCAGCTGTGAACGTTGCCTTGTCCAGCGTTGCGAAGTACTGGGTATTTACAAATTTATTCCCCGGACCTATTCCTCAAGTGTCCGTCTATGGGCTTCCAACTGGAACAAGAATAGAAAATGGAAAAGCCGTTCAGGATCTCGGACAAGCGCATGCAAGTATACTCAATGGAGATCCCAACATCATTCTCGGGCATCACGGAGGACAGTCTCAGGTCACAGTATCTGCTGCCCAACAGATACCAGTCTCCCAAATCATTGCCACACAGTCTGGGCAGACACATGATGCATTGGTGGCACACAGTCAACAGCAAGAGCTACAGGCTTCCAACCAGGTCACCACATCGCACCACCAGGTACCCACTAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGACATCATTCTCAACAACAGCACCTAATGCAGCAGCAGCTTATGGCAGCGTCAAGGCCAGAACACACAAACCAACAGATCCAACTGACGGTCAGTGAAGACGGCATCGTGACAGTCGTAGATCCAGGCAGCAGTAAGATGGCGGAAAAGGAAGATATGCATGAGACGATCAAGCTACCCGCGGATCATACCCTCACCGTGCATCAGTTGCAGCAGATTGTCGGGCAACAGGTGCTGGACAGCGTGGTTCGCATCGAGCAAGCGACCGGCGAACCCGCTAACATCCTAGTCACTCACAATCCTGACGGCACCACGTCTATTGAAGCTAGCGCTAGCGATCCGCTCGCTATCGTCAAAGACGAGAAGAACCAAGGGAAGATTGAGACGGCGCAGTTCGCTATACCTGCTGAGATTAAGGAAATGAAGGGCATTGATTTGAAGACCGTCAATGCCATGAACATGGAAGGCGCTGTAGTGAAGATATCAACGGGCGCGCCTGAGCATGATCTCCACGCCATGTACAAAGTAAACGTCGAGGATCTATCGCAACTGCTGGCCTACCACGAAGTCTTCGGGAAAATGGGGCCTGATGGACAGCCTCAGGCTAAAGTTTCTGTTGGCGATGTAGAAATAGACGTGCCTGGAACGAGTTCCGGTATGTCCGAAGCGGAGAACTCGCCCGGACACCATTCCTGTGACATCTGCGGGAAAATATTCCAATTCCGGTATCAGCTTATAGTACACAGACGCTACCACGGCGAGACCAAGCCATTCACATGCCAAGTTTGCGGCACCTCATTCGCGAACCCCGTAGAACTATCCCGGCACGGGAAGTGTCATTTGGCAGGTGACCCGGCTGAAAGACACGCAAAGAGAATGGCCCAAGACAAACCTTATGCATGCTCCACTTGCCATAAAACATTCTTGCGTAAGGAGCACCTAAACAACCACATACGCAGTCACACGGGAGAAACTCCATACAGATGCGAATTCTGCGCCAAAACATTCACCCGGAAAGAGCACATGGTAAACCACGTGCGAAAACATACGGGAGAGACGCCGCATCGCTGTGATATCTGCAAGAAGAGCTTCACGCGGAAGGAGCATTTTATGAACCATGTTATGTGGCACACAGGTGAAACGCCGCACCATTGTACGATTTGTGGGAAGAAGTATACTAGAAAGGAACATTTGACGAATCATATGAGATCCCACACGAACGATACTCCGTTCCGCTGTGAGCAGTGCGGAAAATCCTTCACGAGAAAGGAGCATTACTCCAATCACATTTTGTGGCATACTGGCGAAACTCCTCACCGCTGCGACTTCTGTTCAAAAACCTTCACCCGCAAGGAACATCTCCTAAATCACGTGAGACAACACACGGGAGAGTCGCCGCATCGCTGCAACTACTGCTCCAAGTCGTTCACGCGGCGCGAGCACCTCGTAAACCACGTCAGGCAGCACACGGGAGAGACGCCCTTTCAATGCGGATACTGTCCTAAAGCGTTTACTAGGAAAGACCATTTAGGTGAGTTACTACAACAACACACAGGAGAGTCGCCGCATAGCTGCAATTACTGCTCCAAGTCGTTTACGTGGCGCGAGCACCTCGTGAACCACGTCTGGCAACACACGGGAGAGAAGCCCTTCCAATGCGGATACTGTCTTAAAGCGTTTACTAGGAAAAACCTGCGGCGCGAGCACTTCGTGAACCACGTCCGGCAACACACGGGAGAGACGCTGTTCCAATGCAGATGCTATCCTAAAGTCTTTACTAGGAAAGACCATAGAATAAATCACGTTCGACAACACACTGGTGAATCTCCCCACAAGTGCTCGTTCTGCACGAAATCCTTCACCCGCAAAGAGCACCTCACGAACCACGTGAGACAACACACGGGCGAGTCTCCCCATCGGTGTACATTCTGCGCCAAGTCTTTCACGAGAAAAGAACATCTTACAAATCACGTGAGACAGCATACGGGCGAAACGCCACACAAGTGCACGTATTGCCCGCGCGCGTTTTCGAGAAAGGAGCATCTGAACTCTCACCTGCGGCAGCACACGGGCGTCACTCCGCACTCCTGCTCTTACTGTAGCAAGACCTTCACGAGGAAGGAGCATCTCGTCAACCACGTACGGAAACACACCGGCGAAACACCGTTCAAGTGCACGTACTGTTCGAAGTCATTTTCGCGCAAGGAGCATCTAACGAATCACATAAATCTGCACACGGGGGAGACACCGAACAAATGTCCATTCTGCACTAAATCCTTCTCAAGGAAGGAACATCTTACGAACCATGTCAGAATACACACAGGCGAGTCGCCGCACCGCTGTGATTTCTGCCAGAAAACGTTCACTCGCAAGGAACATTTGACGAACCATATGAAACAGCACACGGGTGGCGCTGCTCACACGTGTAAGATTTGCCAGAAACCATTCACAAGGAAAGAACATCTACAGACACATATGAGGTACCACAGTTGTAGCGACCGACCGTTCAGTTGTGGAGAATGCGGCAAATCATTCCCACTGAAGGGTAATCTCATGTTCCACGAGCGGTCTCACAACAAATCCGGAGGCCCGAGACCTTTCCGCTGCGACATATGTTCTAAGGACTTTTTGTGCAAATCTCATTTACAAACTCACCGGCGAGTACACGATGACGCCGGCGACGACGTCTCTGTAGAGACCCAGACTGAAGAGTGCTTGACCGTCACCACAGATTGCACCAATAAATGCATCAAGGTGGAGCTTGATACGGCAGATCAAAGAACTTCTGTAGACATTGGACCAACCGAAACTATTACAGTGCAGCCTGCACTTGATTCCCCGAACCACATAGTAGTCACCCAAACTCAAAACACTGTGATGCAGATAAGCAGTCAACAGGTGCGAGTAGGGTCTTCAAGTCCAACTGGTGTAACCACGGGCACTTTCACCCACACGGTGAGCACACAGCACCATCCAGGTTCCACGATCGCGCACCACCCAGTTACTGTGAACTACTAG
Protein Sequence
MNPEHHNINTGGGQPPGSTESQNQRVQAQQQQQQQVSLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKAVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAQQIPVSQIIATQSGQTHDALVAHSQQQELQASNQVTTSHHQVPTNRVEFVQHHNIDMGHHSQQQHLMQQQLMAASRPEHTNQQIQLTVSEDGIVTVVDPGSSKMAEKEDMHETIKLPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASASDPLAIVKDEKNQGKIETAQFAIPAEIKEMKGIDLKTVNAMNMEGAVVKISTGAPEHDLHAMYKVNVEDLSQLLAYHEVFGKMGPDGQPQAKVSVGDVEIDVPGTSSGMSEAENSPGHHSCDICGKIFQFRYQLIVHRRYHGETKPFTCQVCGTSFANPVELSRHGKCHLAGDPAERHAKRMAQDKPYACSTCHKTFLRKEHLNNHIRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLTNHMRSHTNDTPFRCEQCGKSFTRKEHYSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGELLQQHTGESPHSCNYCSKSFTWREHLVNHVWQHTGEKPFQCGYCLKAFTRKNLRREHFVNHVRQHTGETLFQCRCYPKVFTRKDHRINHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFSRKEHLNSHLRQHTGVTPHSCSYCSKTFTRKEHLVNHVRKHTGETPFKCTYCSKSFSRKEHLTNHINLHTGETPNKCPFCTKSFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHMKQHTGGAAHTCKICQKPFTRKEHLQTHMRYHSCSDRPFSCGECGKSFPLKGNLMFHERSHNKSGGPRPFRCDICSKDFLCKSHLQTHRRVHDDAGDDVSVETQTEECLTVTTDCTNKCIKVELDTADQRTSVDIGPTETITVQPALDSPNHIVVTQTQNTVMQISSQQVRVGSSSPTGVTTGTFTHTVSTQHHPGSTIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00704247;
90% Identity
-
80% Identity
-