Eexi017674.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eupithecia exiguata
Gene Symbol
-
Assembly
GCA_947086465.1
Location
OX352243.1:11752325-11767406[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3.8e-07 2.4e-05 24.8 0.2 1 23 211 233 211 233 0.99
2 20 0.00014 0.0089 16.7 1.5 2 23 240 261 240 261 0.97
3 20 4.4e-06 0.00028 21.4 2.4 1 23 267 289 267 289 0.99
4 20 8.2e-06 0.00053 20.6 0.5 1 23 295 317 295 317 0.97
5 20 9.7e-07 6.2e-05 23.5 1.8 1 23 323 345 323 345 0.98
6 20 3.6e-05 0.0023 18.6 2.2 1 23 351 373 351 373 0.99
7 20 0.0023 0.15 12.9 0.4 1 17 379 395 379 400 0.88
8 20 8.3e-06 0.00053 20.6 0.9 1 23 542 564 542 564 0.98
9 20 2.4e-05 0.0015 19.1 1.9 2 23 571 592 571 592 0.97
10 20 4.4e-06 0.00028 21.4 2.4 1 23 598 620 598 620 0.99
11 20 1.9e-07 1.2e-05 25.7 0.6 1 23 626 648 626 648 0.97
12 20 9.7e-07 6.2e-05 23.5 1.8 1 23 654 676 654 676 0.98
13 20 2.4e-05 0.0015 19.1 1.6 1 23 682 704 682 704 0.98
14 20 0.0034 0.21 12.4 1.6 1 23 710 732 710 732 0.88
15 20 0.0014 0.087 13.6 0.1 1 23 738 760 738 760 0.99
16 20 9.1e-06 0.00058 20.4 1.1 1 23 766 788 766 788 0.98
17 20 1.6e-07 1e-05 26.0 3.0 1 23 794 816 794 816 0.99
18 20 1.6e-07 9.9e-06 26.0 0.3 1 23 822 844 822 844 0.99
19 20 1.5e-05 0.00097 19.7 2.8 1 23 850 872 850 872 0.98
20 20 0.00022 0.014 16.1 0.6 1 23 878 900 878 900 0.98

Sequence Information

Coding Sequence
ATGCCGTCCTCAGTCTGTAGAATTTGTTTATGTAGTGATTTGAAAATGTACTACATAGAAAACAATAAAAAATATTCACAAGAAGACTATCAGAGGTTTACTGGAACTTTGCTCGTCTCAGGAGATAACAGACCCAGAACAGTGTGCTACATGTGCGATGCACAGTTAGTTAGATGCTGGAGGTTCTTCGACATGTGCCAGAAGGCGGAGAAAATCTGCACAGACCTGTATCAGAACGATGTGGAGGTGACACAAGATAGTTTAACTCGGCACAACCTGGGATGGATATACAACTTGTCCACAGCACCAGTCAAATTGGTGGCTGACATCAAAGAGATTGAAATCACTGTTAAAGAAGAAATCACTGCGAAAGAAGAAGACACTTCTGATCATGAACACCGGGTGCCCGTGTGCGCTCAACAAATCAAAAGTGATGGCAATTGCAATGTGCCTGCAATTAAGGAAAGTAATGAGGCTGACACTGCACCTACACGCGTAGGAAATCGTAATGAGGCTGACACTGCACCTACACGCATAGGAAATCCTAATAAAAAGGGCATTCGTGTTGAAACTAAAATCAAAATAAAACAAGAAATTGTACTCAATAGACAAATACGATTGCGAAAGCCATATACATGTCCTATATGTGACACTGCCTTCGATACGAAACCTCTTTTACGCAAACACATGGCAACCCACACTGACAACACCTCCCGTGTttgcaaagtatgtaacaaagcatttatctatagtgtttgtctaaggaagcacgtgaaaattcacacagaggggagacaatatacttgcaatgtgtgtggcaaatcctactgtatgaagcaaggcttaaagaatcacatgaatatacacaccggagcaaagccgtacacatgcagtgtgtgtgaaaaatcattctctggtccttcaactttaataaaacacaagacaatacacactggtgagagaccatactcctgtgacgtatgctataaaaaattcaggcaaagtggtgatttgaggagacacatgaaattgcatactggagaacagccatttacctgcaacatttgcaacaagtcatttatcaagagttacatattaaaaaatcatttgaaaacacacactggaaaaaagccctataattgcgaagtttgcaataagtctttcaggaatagcaccactttggcattccacactCTTGTCTCAGGAGACAAGAGACCCCGCACAGTGTGCTACATGTGCAATGCACAGTTAGTAAGATGCTTGAAGTTCTTCGACATGTGCCAGACGTCGGAGAAAATCTGCACAGACCTGTATCAGAGTGATGTGGAGGTGACACAGGAGAGTTTAACTCGACACAACCTGGGATGGATATACAACTTGTCAACAGCACCAGTCAAATTGGTGGCTGACATTGAAGAAATTGAAATCACTGTTAAAGAAGAAACCACTGCTAAAGAAGAAGACACATCTGATGATGAATACCTGATGCCCGTGTGCGTTGTACCAATCAAAAGTGATGACAAAAACAATCGGTCCCCAATTAAAGAAAGTAATGATGATAAAACGAAAATCAAAATAAAAGAAGAAATTGTACTCAATAGACAAATACGATTGCGAAAGCCACATACATGTCCTatatgtaacagtgccttcaatacaaaacctcttttacgcaaacacatggcaacccacactgacaacaactcccgtgtttgcaaagtatgtaacaaagcatttatctatagtgtttgtcttaggaagcacatgaaaattcacacagaggggagacaatatacttgcaatgtgtgtggcaaatcctactgtatgaagcaaggcttaaagaaccacatgaatatacacaccggagcaaagccgtacacatgcagtgtgtgtggaaaatcattctctagtccttcaactttaataaaacacaagacaatacacactggtgagagaccatactcctgtgacgtatgctataaaaaattcaggcaaagtggtgatttgaggagacacatgaaattgcatactggagaaaagccatttacctgcaacatttgcaacaagtcatttattaagagatatatattaaaaaatcatatgaatatacacactggagaaaagccctataattgcgaaatttgcaataagtctttcaggaaaagcaccaccttggcattccacactgtacgtcatgctggagaaaagccatatacatgtcctatatgtaagagtatctttgatctcaagcctcttttacttaaacatattgcgacccacaccgacaactcctcatatgtgtgcaaaatttgtagcaaagtttttgttcatagtattcttttaaagcaacatgagagaattcacatggatacaaaacgttttacttgcaatgtgtgtggcaaaaccttctgcaggagtaatggtctaatcaatcatatgaaaacacacacaggagaaaagccctataagtgcaatgtatgtgacaagtcatttcctcggaaggagacattagagggacacataagaatacacacgggtgagaagccgtactcttgtgatgtatgcaataagaaattcacttttaaccacggcctaaacacgcatattaaaatacacactggagaaaagccatttagttgcagcatctgcaacatgtcatttattggaggttataaactgagaagacatttgaaagttcacagcaaagaaaagccttag
Protein Sequence
MPSSVCRICLCSDLKMYYIENNKKYSQEDYQRFTGTLLVSGDNRPRTVCYMCDAQLVRCWRFFDMCQKAEKICTDLYQNDVEVTQDSLTRHNLGWIYNLSTAPVKLVADIKEIEITVKEEITAKEEDTSDHEHRVPVCAQQIKSDGNCNVPAIKESNEADTAPTRVGNRNEADTAPTRIGNPNKKGIRVETKIKIKQEIVLNRQIRLRKPYTCPICDTAFDTKPLLRKHMATHTDNTSRVCKVCNKAFIYSVCLRKHVKIHTEGRQYTCNVCGKSYCMKQGLKNHMNIHTGAKPYTCSVCEKSFSGPSTLIKHKTIHTGERPYSCDVCYKKFRQSGDLRRHMKLHTGEQPFTCNICNKSFIKSYILKNHLKTHTGKKPYNCEVCNKSFRNSTTLAFHTLVSGDKRPRTVCYMCNAQLVRCLKFFDMCQTSEKICTDLYQSDVEVTQESLTRHNLGWIYNLSTAPVKLVADIEEIEITVKEETTAKEEDTSDDEYLMPVCVVPIKSDDKNNRSPIKESNDDKTKIKIKEEIVLNRQIRLRKPHTCPICNSAFNTKPLLRKHMATHTDNNSRVCKVCNKAFIYSVCLRKHMKIHTEGRQYTCNVCGKSYCMKQGLKNHMNIHTGAKPYTCSVCGKSFSSPSTLIKHKTIHTGERPYSCDVCYKKFRQSGDLRRHMKLHTGEKPFTCNICNKSFIKRYILKNHMNIHTGEKPYNCEICNKSFRKSTTLAFHTVRHAGEKPYTCPICKSIFDLKPLLLKHIATHTDNSSYVCKICSKVFVHSILLKQHERIHMDTKRFTCNVCGKTFCRSNGLINHMKTHTGEKPYKCNVCDKSFPRKETLEGHIRIHTGEKPYSCDVCNKKFTFNHGLNTHIKIHTGEKPFSCSICNMSFIGGYKLRRHLKVHSKEKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00699761;
90% Identity
iTF_00699761;
80% Identity
iTF_00699761;