Basic Information

Gene Symbol
Arid2
Assembly
GCA_947086465.1
Location
OX352244.1:3758501-3774642[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.7e-19 7.3e-16 58.6 0.0 2 89 17 101 16 101 0.93
2 2 8 2.2e+04 -4.0 0.0 44 68 317 343 314 350 0.62

Sequence Information

Coding Sequence
ATGTCTAAATCACAAATAAACACTAAATCCAGCAGCTATGTGAGGGATAAGGAAGCTTTTATGAAAGAGCTTAGGCAGTTCAATGAGAGCAAAAACATCACTTTGAAGTCCCCTATCGTGAACGGAATTGAATTAGATTTGTATCTATTTTACTCCTTAGTTCAACAAAGAGGTGGTATCGGGAAGGTAAATCAGACAGATGTCTGGGAAACGTTTTTGCGACCATTGCAGCTGCCTCATCCTTGTATAAATGGATCAACTTTACTGCGCAGGATATATGGGATACATTTGGAGAAATTTGAGCGAGCCAAAGGACCTCCAGGCCGTGACGATGATCTTGACATTGAAGAAGAGTTGACGCGACGCGGTCGCGGTAGCCATATGCCTCGAATCATGTTCAGTGGTGGTACATACATATCAGCGTCCGGTGAAGCGTTGCGTACAGCGCAACGTCCTACCGCGACCCATTCTGAACGGCTGGCATTGTCCCTGCTCTCGCCGATGCCGAATGAACAAGACTTTGCTGTGAATGTGTGCACGGTACTAGCGGCGGACCATTCGAATCGTCTACCATTGGCGGCCACTCCTCATATCTTGGACTTTCTGCTGGCACATGCTGGGGTTTATAATCATCCGAGTCTCCGAGACACGATCGGTCGCTCCTACTTCGAGGCCCGCGGCCGCTATCCAGACGAGTTCTGGAAGCTCCGAGCCGGCGGCGGCGGCGCCCGAGAGCTGGCAGACGAGACCAAGTTTACTCAGACTATAGATGGAGAACAACCAGAGCTGATGGTTCAAGCTATGGCAGCACATAACAACCTTACTGATTGTCTGACGATGAAGGAGAATTATGAGGATCTGGAGAAGATCGCTAGCGATTTTGACATACTAGAAGACTGGGTGTCCGAACCATCAGAGGAATCCCAGCTGTTTGCATCTGCACTGGGTGGTGGAGCTCACTGCGTTTACACACAGAGAGTGCTGCAGATCGCGTCTATAATCCGCTCTCTGTCCTTCCACGAAGAGAATGTTCAGTACTTGGCCAAGAACAACACTCTTATAAGGTTCTTACTTCTCTGCGCGAACTGCTGGGTCGGTACGCTACGGCAGTCAGGACTTGATACGCTTGGAAATGTATCTACAGAACTTATCATTAAGGACCCGGCGACCTGCCTTCTCTCCCGACACGTACTATCGACCATCCAGTCGGCGCTAGTGTCCGAGGACCGCGCGCGCCTGCTCGCCGCTCTAGAGTTGCTCAACAAATTAGCACAGAACGAGCTCAATGAGGACGCGTTGCTCAAGTCTTTGGAGGCTAAGGTCTACTCCGACGTTTGCGCGCTTCTAACCCTCCGGGATATAATGGTCTTGGTTTGTACACTGGAATGCGTGTACGCATTGACGTCATTGGGTGACCGCGCAAGCGAATCAGTAGCGCGCGTGCCTGGATTGGTGCATACGTTGGTGTCATTGGTTACTGTGGAGGCTCAAAGCTACGGCCCTAAAGCTTGCATCCTGATGCGAGTCGTGGAGACAGTGAGCGGTCCGGCCGCGATCGCCGCTGTACAAGAGCGGGAGGCGCCGCCGCCGACACCGCAGCAGCAACCGCAATCGCAACCGCAGACACCCCAAAAACCAGTACAACAAGAGCAGGCGCAGTCGCCTGTAAGTCAAATGCCGACGCCGACCAACACGTTGCAGCAATCACACTTACAACAACGGACTGTACAGGAAAACGAACACTTCGCGCTCGCCTGGCTCCGCTCTTCCTACGAACCACTGCCAGCTAACGACAACAGCGCGTGCGACGCGACAGATCTATACAAGTTATATCTCACGTGCTGTACCAAACTTAGTCGGAAGGGGGTCATTGCTCCCGCACATTTCCCACGACTCGTCAGGACCGTTTTCGGCGGTACTGTCGGTCCAAACCAAGTGACATTGGCATCTGGGGAGACGCAACAGGTGTACGTCGGTATCCGATCAAGAAACCAGAATAGAACTCCTGCACAACCTACGGGACCAGCATCGCCCATACTGAAAGCTCAACTGACCAGCAAACCTGGAGCGGAAGTGAAAACACCTATTCAACAACAGCCACAACAAGGCCACCATACAACACCGCTAGAATCCAACCCGACAAATACAACGCTAATAAAACACCTGTTAGCGCATAAAGTAAGCCCCGCGCAACCTCAAATGCAAGTCGCCCAAAGACAGCAAAATCAACAAGGAAGAGCAAACGTCGTTGTACAAGCTCCTAGTCAGGCAATGGACGTGGATCCCGAGGAACTGATCAAATGTACTGCGATCACGCCGGTCGGTGTTGCCAGCATTAATCCTGCGGTGCATGATAAGGCAAGTTTTGTATCGAATGGGTGTACTAAGCAGAAGAAGGATAGAAAATGA
Protein Sequence
MSKSQINTKSSSYVRDKEAFMKELRQFNESKNITLKSPIVNGIELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLQLPHPCINGSTLLRRIYGIHLEKFERAKGPPGRDDDLDIEEELTRRGRGSHMPRIMFSGGTYISASGEALRTAQRPTATHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLAATPHILDFLLAHAGVYNHPSLRDTIGRSYFEARGRYPDEFWKLRAGGGGARELADETKFTQTIDGEQPELMVQAMAAHNNLTDCLTMKENYEDLEKIASDFDILEDWVSEPSEESQLFASALGGGAHCVYTQRVLQIASIIRSLSFHEENVQYLAKNNTLIRFLLLCANCWVGTLRQSGLDTLGNVSTELIIKDPATCLLSRHVLSTIQSALVSEDRARLLAALELLNKLAQNELNEDALLKSLEAKVYSDVCALLTLRDIMVLVCTLECVYALTSLGDRASESVARVPGLVHTLVSLVTVEAQSYGPKACILMRVVETVSGPAAIAAVQEREAPPPTPQQQPQSQPQTPQKPVQQEQAQSPVSQMPTPTNTLQQSHLQQRTVQENEHFALAWLRSSYEPLPANDNSACDATDLYKLYLTCCTKLSRKGVIAPAHFPRLVRTVFGGTVGPNQVTLASGETQQVYVGIRSRNQNRTPAQPTGPASPILKAQLTSKPGAEVKTPIQQQPQQGHHTTPLESNPTNTTLIKHLLAHKVSPAQPQMQVAQRQQNQQGRANVVVQAPSQAMDVDPEELIKCTAITPVGVASINPAVHDKASFVSNGCTKQKKDRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00266969;
90% Identity
iTF_00704734;
80% Identity
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