Basic Information

Gene Symbol
Arid2
Assembly
GCA_958496255.1
Location
OY292471.1:7420361-7440005[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.3e-19 1.5e-15 58.0 0.0 2 89 17 101 16 101 0.94

Sequence Information

Coding Sequence
ATGGCTAAAtcacaaataaacacaaaatcCAGCAGCTATATGAGGGATAAAGAGGCTTTTTTGAAAGAGCTTCGGCAGTTCAATGAGAGCAAAAACATAACATTGAAGCCGCCCATTGTAAATGGTGTTGAATTGGATTTATATCTATTTTACTCATTAGTACAACAGAGAGGAGGTATTGGCAAGgtgAATCAAACAGATGTCTGGGAAACATTCTTACGGCCACTGCGTCTACCACACCCTTGTGTCAATGGATCTACTTTGCTGCGAAGGATATATGGAATTCACTTGGAAAAGTTTGAGCGTGCAAAAGGACCCCCTGGCCGGGACGATGACCTCGATGTTGAAGAGGAGTTGACGAGACGCGGCCGCGGTAGCAACATGCCTCGAATTATGTTCAGTGGTGGTACATACATTTCAGCGTCCGGCGAAGCGCTACGTACGGCCCAAAAGCCGACAGCGTCGCATTCGGAGCGATTAGCTCTCTCGCTCCTTTCGCCGATGCCTAACGAACAGGACTTTGCTGTGAATGTGTGTACGGTGTTGGCCGCTGATCATTCCAACCGGTTGCCTTTAGCTGCCACCCCACATATACTGGACTTCTTGCTGGCGCATGCTGGTGTTTATAACCATCCGAGTCTCCGCGACACGATCGGCCGCTCGTACTACGAAGCCCGAGGTCGCTACCCCGACGAGTTCTGGAGGCTCCGAGCCGGCGGCGGAGGCGCCAGGGAGCTCGCCGACGAGACCAAGTTCACTCAGAGCGTAGACGGGGAGCCCGAGCTGATGGTGCAAGCGATGGCGGCACATAACAATCTCACAGACTGTCTCACTATGGACGGACAGGAGGACGAAATGGAGAAGATTGCTGGGGACTTTGATATCCTAGAAGACTGGGTGACAGAACCCTCTGAAGAGTCTCAACTCTTCGCCCCAGCGCTAGCCGGCGGCGCCAACTGCGTGTACACACAGCGCGTGCTTCAAATAGCGTCGATAGTACGCTCTCTGTCCTTTCACGAGGAAAATATACAGTATCTGGCTAAAAACAACACTCTTATCAGATTTCTCCTACTCTGCGCCAACTGTTGGGTAGGCACGCTGCGCCAATCCGGATTTGACACCTTGGGAAATGTATCTACAGAACTGATAATCAAGGAGCCAGCAACATGTTTAATCTCTCGCCACATCATATCCACCATCCAGTCAGCCCTCGTGTCTCCGGACCGGGCGCGTGTGCTCGCCGCTTTAGAACTACTGAACAAACTAGCTCAGAACGAGCACAATGAAGACGCTCTGCTTAAAGCTTTGGAATCTAAGGTGTATGCAGATGTGTGCGCACTACTGACTCTCCGCGATATAATGGTGTTAGTGTGCACACTAGAGTGTGTGTACGCACTAACATCGCTAGGAGACCGCGCCAGTGAGGCGGTAGCGAGGGTCCCCGGCTTGGTGCACACTCTGGTGTCGCTCGTCACTGTCGAAGCGCAAAGCTACGGTCCTAAGGCGTGTATCCTGATGCGAGTTGTGGAGACGGTGAGTGGACCCGCGGCGCTAGCGGCCGTGCAAGACAGGGAACAGACACAGACACAGCCCGTACAGCCACAGACCCCGCAGAAGCAGATAGTTCAGGAGGCCCCCGCCTCCCCCGCCGCACCCCTCCCCGCGCCCACCAGTACATTGCAACAGTCGCATTTGCAACAAAGGACTGTCCAGGAAAACGAGCATTTTGCACTCGCATGGCTTCGTTCCTCCTACGAGCCTCTGCCGGCCAACGACAACAGTACTTACGATTCTGGAGAGTTATACAAACTGTATCTAACATGCTGCACCAAACTCAACAGGAAAGGGGTTATTGCACCCGCACACTTTCCTAGACTTGTCAGGACCGTCTTTGGTGGAACCGTGGGTCCTAATCAAGTGACTTTGGCTTCAGGCGAAACACAGCAAGTGTACGTCGGTATTCGCTCTAGAAACCAGAGTCGCTCAACTACACAACCAGCTGGACCGGCTTCTCCTATTTTGAAGGCGCAACTGACGAGCAAACCTAGTGCTGGAGAAGTAAAGACACCCGTTTCCCAATCTCAGAGCCAGCCAGCGACTCCGCATATTGCGTCGGCGCTAGAGTCGAGTCCGACCAACACAACGCTCATCAAACATCTGCTGGCGCACAAAGTAAGCCCCGCGCAACCCCAACTGCAAGTCGCACAAAGACAACAAAATCAACAGCAAGGACGAAATGCTAACACGGTCGTGGTACAGCCACCTACTCAGGCAATGGATTTGGATCCTGAGGACATGATCAAGTGCACTGCCATTACCAGACCAACACCGGGCGGTGTTGCTAGTATCAACCCGGCTTTAGACAAGATTGCAATACCATACCAAGTAGAGCCTACTTCCACTTCACATAGGTTGTTTTGTTTGAGCCTCAATTTCTGGTTATTCTTGATTTCTGCAGGGAAGAAGAAATGCGAATTTGATACTTCTTTCGATCACGTTGTGATACCTTTTGATAAAAGATTTGGTGGTTTGGACATGCATGACCTTCAATAA
Protein Sequence
MAKSQINTKSSSYMRDKEAFLKELRQFNESKNITLKPPIVNGVELDLYLFYSLVQQRGGIGKVNQTDVWETFLRPLRLPHPCVNGSTLLRRIYGIHLEKFERAKGPPGRDDDLDVEEELTRRGRGSNMPRIMFSGGTYISASGEALRTAQKPTASHSERLALSLLSPMPNEQDFAVNVCTVLAADHSNRLPLAATPHILDFLLAHAGVYNHPSLRDTIGRSYYEARGRYPDEFWRLRAGGGGARELADETKFTQSVDGEPELMVQAMAAHNNLTDCLTMDGQEDEMEKIAGDFDILEDWVTEPSEESQLFAPALAGGANCVYTQRVLQIASIVRSLSFHEENIQYLAKNNTLIRFLLLCANCWVGTLRQSGFDTLGNVSTELIIKEPATCLISRHIISTIQSALVSPDRARVLAALELLNKLAQNEHNEDALLKALESKVYADVCALLTLRDIMVLVCTLECVYALTSLGDRASEAVARVPGLVHTLVSLVTVEAQSYGPKACILMRVVETVSGPAALAAVQDREQTQTQPVQPQTPQKQIVQEAPASPAAPLPAPTSTLQQSHLQQRTVQENEHFALAWLRSSYEPLPANDNSTYDSGELYKLYLTCCTKLNRKGVIAPAHFPRLVRTVFGGTVGPNQVTLASGETQQVYVGIRSRNQSRSTTQPAGPASPILKAQLTSKPSAGEVKTPVSQSQSQPATPHIASALESSPTNTTLIKHLLAHKVSPAQPQLQVAQRQQNQQQGRNANTVVVQPPTQAMDLDPEDMIKCTAITRPTPGGVASINPALDKIAIPYQVEPTSTSHRLFCLSLNFWLFLISAGKKKCEFDTSFDHVVIPFDKRFGGLDMHDLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2