Edod020786.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- nfxl1
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000182.1:1412-3883[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 2.3e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.022 1.6e+02 2.7 0.7 4 10 169 175 168 175 0.97 3 19 4.6e-07 0.0035 17.7 15.9 3 19 186 202 185 202 0.95 4 19 0.16 1.2e+03 -0.0 3.2 1 8 227 233 227 234 0.89 5 19 1.2e-07 0.00094 19.5 13.5 3 19 239 255 237 255 0.91 6 19 0.21 1.6e+03 -0.4 4.9 6 12 280 286 279 286 0.91 7 19 4.8e-09 3.6e-05 24.0 11.2 1 19 290 308 290 308 0.99 8 19 2.5e-05 0.19 12.1 19.9 3 19 345 361 337 361 0.86 9 19 0.69 5.2e+03 -2.1 1.9 7 13 365 371 365 374 0.74 10 19 6.2e-07 0.0047 17.3 17.0 1 18 395 412 395 413 0.97 11 19 3.5e-08 0.00027 21.2 16.9 1 19 422 440 422 440 0.99 12 19 0.00031 2.3 8.6 6.4 9 19 488 498 486 498 0.89 13 19 0.00066 5 7.6 7.1 1 12 508 518 508 518 0.96 14 19 0.53 4e+03 -1.7 3.3 14 18 547 551 547 552 0.85 15 19 3 2.3e+04 -4.6 4.4 8 12 568 572 567 582 0.63 16 19 2.4e-06 0.018 15.3 6.6 1 11 588 598 588 599 0.98 17 19 1 7.6e+03 -2.6 1.5 15 18 613 616 612 617 0.82 18 19 3.9e-05 0.29 11.5 12.5 1 18 628 645 628 646 0.86 19 19 1.8e-05 0.14 12.6 13.8 1 16 687 701 687 705 0.93
Sequence Information
- Coding Sequence
- ATGGCGCGTCGCTACAAAGACGCAGCCGCGAAGCTGCAGCAAAACGTGCAAAAACATCTGAAGGATATGAAGGATCTCTCGTCGTCCGAGGACGAGGAGCCGTATGACGCCGGGGTGCTGGAGGGGATGTTCAGTAGCTactggcgcggcggcggcgacacGCACATGCTCAACAGGACCAAGAACCTTCTGGAAGAAGCACTTAGCGGGCGCGCCGTGACCTGTCTTATCTGCATCAGCTCCATCAAGCGCGCGCACGCCGTATGGAGCTGCGACCACTGCTACTCGCACTTCCACCTCGCCTGCATACAGAAGTGGGGTAACGACTCCATCAGCCTGCGCAGCATTGAGCCGCAGGCGCCGATTAGCTTCCACAGGCCGCTCAAGCTTGAGTGGTGCTGTCCGAAATGCCGCAACTCGTATAGCAAGGCGGAGATCCCGCGCAAGTACCGCTGCTTCTGCAGCAAGACCGACAACCCACCGGTGCATCCCTGGCTGCTGCCCCACACCTGCGGGGAGGTGTGTGAGAAGAGTCTGTCCACAGGGGACAACTGCAAACACAAGTGTCTATTGCTGTGCCATCCCGGGCCGTGCCCACCGTGTCCCCAGACTGTTAACAGAATATGCTATTGTGAAAAGGAACAGAAGAAAGTCAGATGTAGTTCAACAAAGTGGTCCTGTGGCCATCAATGTAAGAGAACTTTGCTTTGCCAGACTCACAAGTGTGAGCTAATCTGCCATGAGGGAGAGTGTCCTCCGTGCACCCACACCAGCGTCCAGCCATGCCAGTGCGGAGCTGAGAAGACCACGAGACCCTGCGATGACCCTTTCTGGCACTGCAAAAAACCTTGCCATAAACCATTCTCATGTGGCTACCATAAATGTGAAAGAGTCTGCCATTCTGGCATCTGTGAGAAGTGTCCGAATTCTGGCATGAGATCCTGTCCCTGCGGAGCCAACCAAAGATATGTGCAATGTCCCGACACCATGGAGACCTGCCTGGGGACCTGCGGGAAGCAGCATGAGGGGTGTGAACACAGCTGCCCGGAGAAATGCCACAAGGGAGCCTGCCCTCCCTGCCAAGTCATGATCCAGAAGAAGTGTCACTGTGGCTCGCACATGCGGTCCTTGCCATGCAGCAAGGAGTATAAGTGTGACACTAAATGTAGAGGGACCAGGCCTTGCGGAAAGCACAGCTGTGCCAGGAAGTGTTGCAATGGAAACTGCCCGCCGTGTGAAAAGGCGTGCGACAAGCCCCTGCAATGCGGCCGCCACAAGTGCACTACCATCTGCCACCACGGGCCTTGCTACCCATGCCCCCTGGAATCTAAAGTAGCCTGCAAATGCAAGGAAACCTACGTCACAGTCCCATGTGGCCGAGAGCGCTTCACGAAGCCACCAAAATGTAGCCTCCCGTGCCAAGTGAAGTACAAATGTGGACATCTTGAAGAAAATAAGCATTCCTGCCACTTCGGAGACTGTCCTCCTTGTAAAGCAATCTGCTACAAAGCATACCCAAAGTGTGGTCACGAGTGCAAAGCCGTTTGTCATTCATATAAAGCTGTAGTCTTCAAGCAGATCGAGAAACCCGCCACTCCGTGGGATATACAACCCCCGAAGACTAAGATCATGACCTTGGAATGTCCTCCCTGTAACCAACCTGTCTCCGTGGTCTGCTTCGGCGAGCACGAGACCGATAGCCAGCCGTGCCACACGGCGGCTCGGCGCCCCTGCGGCCGGCCGTGCGGGAAGCCGCTAGCCTGCGGAAACCACACCTGTACTCAACTCTGCCACCTGAGCGCCCCCGATCCTAACTACCCAAACGTACCATCCAGCTGCAAACCTTGTAATAGAGAATGTGCTAAGGTACGTCCCGCGAAGTGCTCGCACAAGTGCGCCCGGCGAGCGTGCCACCCCGGCGCATGCCCGCCGTGCGCCGTACTAGAGCGTGTGCCGTGCCACTGCGCCGTCACCGAGCTCTATCTCAAGTGCACGGAGTACTGCGGCGCCACCGAGGAAATGTTGTCATGCAAGCAGCAGTGCCCCAGGAACCTGGCGTGCGGACACCGCTGCAAGAACAACTGCCACTCGGGACCCTGCGGCGAACAGATCTGCATCAAGAAAACTAAGATACACTGCCCCTGTGGCAACTTGAAGAAGGAAGCACCTTGCAGTATCGTCAGAAGTGGCGATGCTAAGGTCGCGTGTGATGACTCCTGCGAAGCTAAAAAAGATGCAGCAAAGCGGGAGAAAGAGATGGAACAACAGAGGCTGAAGCAGCTGGAGGAGGACAGGAACAGGCGCGAGCTGGCAGAGTATGAGTGGAAGCTCAGCGGAAAAAAGAAGAAGTATAAGGAAAAGAAGATTGTGACAGACATACAGCAGAAGAATTGGCTACAGAAATATTGGATAGCACTATTGGCGGTTTTAGTTGTGATTATTGCAACAGTTTACTCTAGTTACCTTATTTAG
- Protein Sequence
- MARRYKDAAAKLQQNVQKHLKDMKDLSSSEDEEPYDAGVLEGMFSSYWRGGGDTHMLNRTKNLLEEALSGRAVTCLICISSIKRAHAVWSCDHCYSHFHLACIQKWGNDSISLRSIEPQAPISFHRPLKLEWCCPKCRNSYSKAEIPRKYRCFCSKTDNPPVHPWLLPHTCGEVCEKSLSTGDNCKHKCLLLCHPGPCPPCPQTVNRICYCEKEQKKVRCSSTKWSCGHQCKRTLLCQTHKCELICHEGECPPCTHTSVQPCQCGAEKTTRPCDDPFWHCKKPCHKPFSCGYHKCERVCHSGICEKCPNSGMRSCPCGANQRYVQCPDTMETCLGTCGKQHEGCEHSCPEKCHKGACPPCQVMIQKKCHCGSHMRSLPCSKEYKCDTKCRGTRPCGKHSCARKCCNGNCPPCEKACDKPLQCGRHKCTTICHHGPCYPCPLESKVACKCKETYVTVPCGRERFTKPPKCSLPCQVKYKCGHLEENKHSCHFGDCPPCKAICYKAYPKCGHECKAVCHSYKAVVFKQIEKPATPWDIQPPKTKIMTLECPPCNQPVSVVCFGEHETDSQPCHTAARRPCGRPCGKPLACGNHTCTQLCHLSAPDPNYPNVPSSCKPCNRECAKVRPAKCSHKCARRACHPGACPPCAVLERVPCHCAVTELYLKCTEYCGATEEMLSCKQQCPRNLACGHRCKNNCHSGPCGEQICIKKTKIHCPCGNLKKEAPCSIVRSGDAKVACDDSCEAKKDAAKREKEMEQQRLKQLEEDRNRRELAEYEWKLSGKKKKYKEKKIVTDIQQKNWLQKYWIALLAVLVVIIATVYSSYLI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00857272;
- 90% Identity
- iTF_00703614;
- 80% Identity
- -