Basic Information

Insect: Eupithecia dodoneata
Gene Symbol: -
Assembly: GCA_947044255.1
Location: CAMRHC010000158.1:951759-960273[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 1.6 99 4.0 0.4 1 23 54 77 54 77 0.95

2 21 1.3 79 4.3 6.4 1 23 84 107 84 107 0.97

3 21 4.9 3e+02 2.5 3.9 1 23 184 206 184 206 0.97

4 21 0.0019 0.12 13.3 1.0 2 23 212 233 211 233 0.97

5 21 2.4 1.5e+02 3.5 1.5 1 23 239 261 239 262 0.94

6 21 0.19 12 6.9 3.4 2 22 495 515 494 515 0.95

7 21 5.4 3.3e+02 2.4 0.4 1 20 611 630 611 633 0.70

8 21 0.66 40 5.3 0.3 2 23 763 784 762 784 0.96

9 21 0.058 3.5 8.6 1.5 3 23 859 879 857 879 0.96

10 21 0.034 2.1 9.3 0.5 1 23 887 909 887 909 0.97

11 21 0.14 8.6 7.4 3.5 1 23 947 969 947 969 0.95

12 21 0.00027 0.016 15.9 4.0 1 23 978 1000 978 1000 0.99

13 21 0.54 33 5.5 3.6 1 23 1080 1102 1080 1102 0.98

14 21 0.0099 0.61 11.0 1.3 1 23 1155 1177 1155 1177 0.97

15 21 0.18 11 7.0 0.0 2 23 1184 1205 1183 1205 0.97

16 21 0.12 7.5 7.5 3.0 1 23 1272 1294 1272 1294 0.91

17 21 0.016 0.97 10.4 0.9 1 23 1300 1322 1300 1322 0.95

18 21 0.0074 0.45 11.4 2.6 1 23 1412 1434 1412 1434 0.97

19 21 0.00019 0.011 16.4 1.4 1 23 1440 1462 1440 1462 0.99

20 21 0.35 21 6.1 2.0 1 23 1552 1574 1552 1574 0.96

21 21 0.0015 0.093 13.6 3.3 1 23 1585 1607 1585 1607 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	1.6	99	4.0	0.4	1	23	54	77	54	77	0.95
2	21	1.3	79	4.3	6.4	1	23	84	107	84	107	0.97
3	21	4.9	3e+02	2.5	3.9	1	23	184	206	184	206	0.97
4	21	0.0019	0.12	13.3	1.0	2	23	212	233	211	233	0.97
5	21	2.4	1.5e+02	3.5	1.5	1	23	239	261	239	262	0.94
6	21	0.19	12	6.9	3.4	2	22	495	515	494	515	0.95
7	21	5.4	3.3e+02	2.4	0.4	1	20	611	630	611	633	0.70
8	21	0.66	40	5.3	0.3	2	23	763	784	762	784	0.96
9	21	0.058	3.5	8.6	1.5	3	23	859	879	857	879	0.96
10	21	0.034	2.1	9.3	0.5	1	23	887	909	887	909	0.97
11	21	0.14	8.6	7.4	3.5	1	23	947	969	947	969	0.95
12	21	0.00027	0.016	15.9	4.0	1	23	978	1000	978	1000	0.99
13	21	0.54	33	5.5	3.6	1	23	1080	1102	1080	1102	0.98
14	21	0.0099	0.61	11.0	1.3	1	23	1155	1177	1155	1177	0.97
15	21	0.18	11	7.0	0.0	2	23	1184	1205	1183	1205	0.97
16	21	0.12	7.5	7.5	3.0	1	23	1272	1294	1272	1294	0.91
17	21	0.016	0.97	10.4	0.9	1	23	1300	1322	1300	1322	0.95
18	21	0.0074	0.45	11.4	2.6	1	23	1412	1434	1412	1434	0.97
19	21	0.00019	0.011	16.4	1.4	1	23	1440	1462	1440	1462	0.99
20	21	0.35	21	6.1	2.0	1	23	1552	1574	1552	1574	0.96
21	21	0.0015	0.093	13.6	3.3	1	23	1585	1607	1585	1607	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAGGACGGCGAGGTCACTACGATTGCGCGCCCGTTCGAGACTCGCTTATCGGTGGACGTTTCTTCAGAGGCCTCCTCGGACGCGACGGAAGAATTCGAACTTCCACAGTGCAAAATACGAAGAAACTATAATTGTGCGAAGTGCACGTATAATACGCAGAATCCGCGCGCTTATCTCGTGCACACGCGGGACGTTCACTTCggaagatttaaaatttatgAGTGTCATCATTGCATCTATGCCTCGAGGCATCAGCAGAAACTtttaagacatacgaagatggTTCACGGAATGTCGTCAACTGCGTCCTCTGCCGTCCGAATGGAGACCGAGAGCAgcgccggcgccggcggcgtCGAGAGTGTGACGGAGAACATGGAGGACCTGCTGGAGGAGATCGAGGAGTGCGAGGACTCGCAGGACATGGACGCGGACGAGGGCGAACGCGCGGACGAGGCCGAGCTCGCTGCCACCAGGCACACCAACTCCGGTCTACCAAAAGGGAAAGGAAAGTTCTTCTCATGCGACAAATGCAACTACGTGACCCACATAAAAGCGAGATACACGAAGCACGTCAAGTACCACTCGATGCCTATGATCAAGTGCACGATGTGTGATTTCCGCACGCCTTACAAATGGAATCTGGACCGTCACATGAAGAACCACGGAGGGAGCGGTAGCTTCGTCTGTTCGAAGTGTACGTTCACAGCGGACATCAAGCAAAGCCTGACCGTGCACGAGATGAATCACCACACGCCGCCGGTGGGAGTCGCGGGGGGAGGGCGCCGCCGCAACCGTGTGGGCGCCAGCGACCTGACCGCCGCCGCAGACTGCGCCGCCAAGGAGGAGGAAGGCAGCGGAGACTCCCGCTCCTCGCACCTCTCGGACTTAATGGAGCAATACGCAGAAAGGGAAATAGTGAGCGGTAATAGTGATTCAAATGATACTGCCCCATCACAAGTCCACTCAAACAGAGACGAGAATCAATCCGCTCAAGGCACATCCGGGCAAAACTCCCCTAACTCAAGCAACGAAGATAAATCCAATAAACAGAACAGAAAAGCACCCAGACCTATCCCACAATTGATCCCCCTAAACGCATCAACCCCGAATCAAAACAAAGCAACAGGCGAACCGCCAGCGAAGAAATTCAAAGAATCCACAAATTCAGATATAACAAGCACCTTTGAAAACCTACCCGGGGATATCACCGTGACGCCCGTAAACAACACGCCAAAAGAAACTGTAACTCGCAAGAAAAATGAGTCATTCTTCGATAAATTGAAAGAAAGATTACTAACGGAAACCGGCAAAGAAGGTTCATTGAAATGCAAGAACTGCGGCTTCGAGAGCAAATGTCTTTCCGAACATTCGGTGCACGAAAAGAACTGTGCCGCGCAAGCCAGCCGCGTAATGGTGAACACTGCGCATTCCAGTATGGGTTCCACTCGATGCCAAAACTGCCGGCATCGGTGCAAATCCAGTGCGGATCTCTACGTACACATGCAAACATGTGGCAAGAAAGAAAGCACCACGAACGCAACGGAAACTAAAACAGAAACCGCCGAAGCTTCCACCTCAAGTTACGATAAAGACGCGGAACCGCACCCCATGGAGAACGTGGTCTTCGTATGGAATAACATAAACGAAGGCAATAAATTCGAAAGACCACTCGACATCAACATCAACGACGACTCCACCATGCCGGAGTCGCAGACAAATTACGACGCGGAAATAGTCGATGAGAACGAAGGCATGAATCTATCCCCCAACAGTTTGAGCCTCGGTAAGAATGTTTACAAATGCCCCGACTGCAAATTCTGGGCTGCTACTGCGTCAAGATTCCACGTTCATATTGTAGGACACTTGAACAAAAAGCCGTTTGAATGCTCGCTCTGCAAATACAAGTCTAACTGGCGCTGGGATATCACTAAACATATTAAATTGAAATCTGCTAGGGATCCAGAACACAATGACGCTAAAGTTCTGATGACAGACGAAACCGGTAGACGAAACTACAGCAAATACAATAAGTTCTTAGCTGTCCCGGTTCAAAACGTAAACGGCGAGAATGAATTCCACTTTATATATCAGAACACAGCATTAGATGCCTCGATGGAGATAGATGACTCATTGAATGATGCCGGAGAAATAGTGACCACATCGTACGATATGCAACCGCTGAACTTGCAAACGCAATTTGCTGATAACTCAATGGACGGCCAAGATAAGAAACCGAAGCGGACTTTGTGGAAATGCAAGAAGTGTAATTACAAGGACCCGTCCAAAGCAGCGTTGCTGGAGCACGTGAGACAGCACTCCAAAGACAACCTGGAGGACCCTCAGACGAAGAAGGCAGATGCCATCGACCCAGCTGACTTGGCGTACCGCTGCGGCCACTGCAACCAGTTGTCCAATTGGAAACACGTCATACAGAGACATTGCCGCTTGAAGCACGACGGAATAGTAAAAGTGATAACGACGGTGAAGCCCAAACCTGAGCCCACCCCGCCAGTCAGCACTGAACCCTTCAGCGACTTCTGTTCCAAGTGCCCCTACAGAACCAACGACAAGACGCTCTTCAAAGAACATCTGCAACAGCACCGCCCGTCTTCCCAGTCCATCTTCAAATGCTACTTCTGCCCTTACTTCGTCAAGGACGAACAAGATCTGATCCAACATCTTTTACTTCACGGCATAACTGACCCTGAAGAATATATCGCAAAGGCGATGGGGTGCAAGTCTCCTCTGCCCGACCATGCGGCCTTGCACGAAGGCACCGTTGCCACCGGCGTCAACAAACGGCACAAGTGCCAGGAATGCCCCTACGAAACCAACAGCAAATCACAGTTCATGTATCACGAGCAATTCCATCGCTCAACCTCCGCTGAGACACCCTACAAATGCCCCGAATGCAACTACAGCGTCTCCAAGAGACATCTTCTTCATCAACACTTGAGAGTTCACGGAATTTTCTCCAAGAAGAACGAAAGCGAAGCGGACCTTGAAGCATCCACATCTCCCCAGAAAGACAAATCGGACAGCTTTACTGACGAAATACCTTATGTGTGGGTATCGGCGAGAAACGAATTCCATAAAATGTACAAATGTCGCTATTGTTCATACGTTAATTCTCAGAAAAATAAGATACCTAACCACGAGAAGATTCACTGCCTCGGTTTCGAAAATAGTGAAGTGATAATATACAAATGTTTAGAATGTAAACATACATGTGATAATGCCGCGAGACTGGCGGAACATTCCAAGAAGCACGGCCTCCTGTACGGTCGCATTTACAGCTTCGTCGATGAAGACGTACCTGATGAGGATCAAATATCTCGCCTGCGGCGAGTTATTGAACTTGAAAAGAACGATGATTCTGCACCAGAAGATAACGCAACTGCTGacatgaaagaaataaaaatgttatacttCTGTCAAAAGTGCCCAGCCCGATATTTTACTGAAAGTGAATTAAAGACTCATGGAAAATCTCATGACCTATCGAATGGAAATAAATGTAAGAATTGTGAATTCTCGGTGCCTGAAGAAGGAGAACTTATAGCTCACCAGTCTGTGCACTCGGACGAACACAACATTAGAACTAACATGCTGAAGTTTATTCACAATTCACATTCTCTTTATAAGGAGCCTCGACTCGAATCCAATCGTAGTTCTGAATCTTCCGAATTGACTTGGTCAGTTGCAGTCAACTATAAAAGTAATGAAAATGTTGACCCTTTACCGAAGAAAACGGAAACAAAGCACACACCCAAGCAGTACTGTTGTAAAGAATGCCCTGCCAAGTTTTTCAAAAGTTCGGCACTCACATACCATTTCGGATTACACGGTGGCGAGGGAGATCACAAGTGCAAGAAGTGCAGCTACGCTGTAAAGAACGTTGGCAATTTGGCTAAACACGAAATTTTACATGAACATGAGAGTAAATCTCCTAATCGTGAATACGAATCTGGCGATGATTTAGATTTCAAAAACATTCCTCTCTCAGGAACAGACCTATTTCAAAGAAAGACTGAAGCTCAAAAAAGAGTACTGACTGATAAAGACAAATTGGTTAAACCGAATGATCATTTTCCGCCTGTGTTACAAGCTGATCCCCAATTCGGATATCTGATGCATGGTAATCCTGAATTCATTTATCCCACGTATCTGAAAAATGGACGTCAAAAGGAAAAACGATACAAATGCCATAAATGCCCTTCAGCTTTTGAAAAGCgtgaacaatacaaaatacatttatctCTTCACGGTTCCAAACAACGTTATAAATGTGAGTTATGCGACTATTCTGTGAAGTATTACGCGAATTATGTTCAACATATGCGTAAGCATCAAATGAATGACGAGGCTCAGGCCGAAAGACTTAAAGGAACCAACGGTGACCCGGTAACACAGGAAGAATTTAAACAAGAAGACGGCACAGACAACATTAAGCTAGCAATCAAAACGATGCCTAAAGGAACACCAAAATCCGATTTTCAACAGTTCTCAGTAAGAGATCAACAAACCCTTCGGCTATTGCAGCTTAGAAGATCTATGAATAATGGCGGTCACGATTCAAGCGCCGCTGAAACTTCGCCAGTGAAGGAGCGCAAAATGCATATGTGTCTTCTTTGCCCTTACACGAATCAGCGGCAAGATGCTTTGAACAATCATTACAGAAGACATGATGAAACAGATGTTCTGAATATTTCCGGTCACAAGTGCTCCTATTGTGACTTAGTAGTTGTGCAATCTCATTTCTTACGGGAGCATATAAAAACacactttaattttaataaaactctcATACCTGAATGTTTTCTAGCTAACGATGATGTCAGTTTTACCATAACGAAAGTGGATGAGGAAAGCGACGAACCAGTTGATCTCAAAttagaaatgaaaaatattattttaccgtGCAATGATGATAGAATATTTGTTAAGATAAAGACAGGGGAACTTGTGGTAGAATAA
Protein Sequence: MLQQMSSSLSAQDGEVTTIARPFETRLSVDVSSEASSDATEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECHHCIYASRHQQKLLRHTKMVHGMSSTASSAVRMETESSAGAGGVESVTENMEDLLEEIEECEDSQDMDADEGERADEAELAATRHTNSGLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGVAGGGRRRNRVGASDLTAAADCAAKEEEGSGDSRSSHLSDLMEQYAEREIVSGNSDSNDTAPSQVHSNRDENQSAQGTSGQNSPNSSNEDKSNKQNRKAPRPIPQLIPLNASTPNQNKATGEPPAKKFKESTNSDITSTFENLPGDITVTPVNNTPKETVTRKKNESFFDKLKERLLTETGKEGSLKCKNCGFESKCLSEHSVHEKNCAAQASRVMVNTAHSSMGSTRCQNCRHRCKSSADLYVHMQTCGKKESTTNATETKTETAEASTSSYDKDAEPHPMENVVFVWNNINEGNKFERPLDININDDSTMPESQTNYDAEIVDENEGMNLSPNSLSLGKNVYKCPDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNDAKVLMTDETGRRNYSKYNKFLAVPVQNVNGENEFHFIYQNTALDASMEIDDSLNDAGEIVTTSYDMQPLNLQTQFADNSMDGQDKKPKRTLWKCKKCNYKDPSKAALLEHVRQHSKDNLEDPQTKKADAIDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIVKVITTVKPKPEPTPPVSTEPFSDFCSKCPYRTNDKTLFKEHLQQHRPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEEYIAKAMGCKSPLPDHAALHEGTVATGVNKRHKCQECPYETNSKSQFMYHEQFHRSTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFSKKNESEADLEASTSPQKDKSDSFTDEIPYVWVSARNEFHKMYKCRYCSYVNSQKNKIPNHEKIHCLGFENSEVIIYKCLECKHTCDNAARLAEHSKKHGLLYGRIYSFVDEDVPDEDQISRLRRVIELEKNDDSAPEDNATADMKEIKMLYFCQKCPARYFTESELKTHGKSHDLSNGNKCKNCEFSVPEEGELIAHQSVHSDEHNIRTNMLKFIHNSHSLYKEPRLESNRSSESSELTWSVAVNYKSNENVDPLPKKTETKHTPKQYCCKECPAKFFKSSALTYHFGLHGGEGDHKCKKCSYAVKNVGNLAKHEILHEHESKSPNREYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERLKGTNGDPVTQEEFKQEDGTDNIKLAIKTMPKGTPKSDFQQFSVRDQQTLRLLQLRRSMNNGGHDSSAAETSPVKERKMHMCLLCPYTNQRQDALNNHYRRHDETDVLNISGHKCSYCDLVVVQSHFLREHIKTHFNFNKTLIPECFLANDDVSFTITKVDEESDEPVDLKLEMKNIILPCNDDRIFVKIKTGELVVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00704516;
80% Identity: -