Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010000995.1:143250-146141[-]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.071 7.5e+02 1.1 0.2 26 45 179 198 156 207 0.72

2 14 0.055 5.8e+02 1.5 0.3 17 32 198 213 192 231 0.73

3 14 0.52 5.4e+03 -1.6 0.0 26 46 234 254 225 262 0.78

4 14 0.19 2e+03 -0.2 0.1 22 52 259 289 252 291 0.78

5 14 0.00092 9.6 7.2 0.0 21 53 314 346 305 347 0.86

6 14 0.015 1.6e+02 3.3 0.1 21 52 342 373 340 374 0.86

7 14 0.00013 1.4 9.9 0.1 23 44 372 393 364 397 0.89

8 14 0.011 1.1e+02 3.8 0.3 26 46 403 423 395 428 0.88

9 14 0.27 2.8e+03 -0.7 0.0 22 46 427 451 424 458 0.79

10 14 0.12 1.3e+03 0.4 0.1 21 31 454 464 450 479 0.82

11 14 0.0013 13 6.8 0.0 21 46 482 507 473 509 0.89

12 14 0.00051 5.3 8.0 0.0 21 46 510 535 506 537 0.91

13 14 0.0012 13 6.8 0.0 21 52 538 569 534 569 0.87

14 14 0.0014 14 6.6 0.0 21 48 566 593 564 599 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.071	7.5e+02	1.1	0.2	26	45	179	198	156	207	0.72
2	14	0.055	5.8e+02	1.5	0.3	17	32	198	213	192	231	0.73
3	14	0.52	5.4e+03	-1.6	0.0	26	46	234	254	225	262	0.78
4	14	0.19	2e+03	-0.2	0.1	22	52	259	289	252	291	0.78
5	14	0.00092	9.6	7.2	0.0	21	53	314	346	305	347	0.86
6	14	0.015	1.6e+02	3.3	0.1	21	52	342	373	340	374	0.86
7	14	0.00013	1.4	9.9	0.1	23	44	372	393	364	397	0.89
8	14	0.011	1.1e+02	3.8	0.3	26	46	403	423	395	428	0.88
9	14	0.27	2.8e+03	-0.7	0.0	22	46	427	451	424	458	0.79
10	14	0.12	1.3e+03	0.4	0.1	21	31	454	464	450	479	0.82
11	14	0.0013	13	6.8	0.0	21	46	482	507	473	509	0.89
12	14	0.00051	5.3	8.0	0.0	21	46	510	535	506	537	0.91
13	14	0.0012	13	6.8	0.0	21	52	538	569	534	569	0.87
14	14	0.0014	14	6.6	0.0	21	48	566	593	564	599	0.88

Sequence Information

Coding Sequence: ATgtactacatagaaaacaaatatcCCCAAGAAGTTTACCAGAGGTTTACAGGAAGTTTGGTGGTCCCAGGAGACAACAGACCCCTCACAGTGTGCTACATGTGTGACGCACAGATAGCACGATGCTGGAGGTTCTACAACATGTGCCAGAAGTCAGAGAAAATCTGCACAGACCTGTATCAGAACAATGTGGAGGTGACACATGAGAGTCTAGCTCAGCACAGCCTGGGATGGATATACAACTTGTCCACAACTCCAGTGAAATTAGTAACTTTTGTTGAAGAGACTGAAATCACTGTTAAAGAAGAAGACACTTCAGACGACGAAATGCTGACGCCCATGTTTGTTGAAGAGATCAAAAGTGAATGCCATTGGCTTAATAGCAATGAAATTATTGATGATAATACTATAAGTACAAGCATACATGATAGCTCAAATGGAAATTGTAATGAAAAAgacattaataaaaaaagagacAAATCCAAATCTAAAATGAAAAGAGAATCCCGTAGAGGCAATGTTGCTAAATTATTTAAGTGTGATGTTTGTAAAAAGTATTTCACTAAGAGTTCCTACTTGGAAAGGCACATGAGAAGACATACTGAGGAAAAGCCATACTCCTGCAAAATATGCACTGAGAAATTTAGTCACATGGATTCATTAAAAACTCATACTCTTGGGCATACAGCAGAGATGCCCACGTGTGATGTCTGCGGCAAAAGTTTTACTACAAAAACAGTGCTCAATAGACATATCATGCAAGTACACTCTGGACAAAAACCAATGGAATGTAAAGTATGCAATAAATCATTTCCTGTCAGAGACAGTCTACGGGCGCATATGAAAATTCATGTTGGTTACAAGCCTTTTGTTTGCAATGTTTGTGGCAAAACCTTTTTCGATAAAAGTCAGCTGAAAGTCCACACCAGAATACATTCTGGAGAGAAACCATTTACATGTGACTTGTGCAATAAATCATTCACTCAATTAACTATATTGAAGAGTCACATGCATCTCCACACTGGAGAAAAGCCTTATGTTTGTAAAATATGCAATAAATCATTTCGACATCGTTCTACTTTGGCCTATCACTCTCAACTCCATACTGGCGGAAAGCCATATACATGCCCCATATGTAACAGTGTCTTCGATTTAAAGCCTCTTTTACGCAAGCACATGGCGACCCATACAGACAACACCTCCCATGTATGCAAGGTTTGTAACAAAGCATTCATCCAAAGTGTTTGTCTCAGAAAGCACATGAAAATTCACACAGAGGAGAGGCAATATACTTGTAATGTGTGTGGCAAATCCTTCTTCAGGAGTACTGGCTTAAATAATCACATGAAAACACACACCGGAGAAAAACCATACACATGCAATGTGTGTGGAAAATCATTCTCCCTTAATTCAACATTGGTGAAACACAAAAGAATACACACAGGTGAGAGACCTTACTCCTGTGACGTTTGCAACAAGAAATTCAGACTCAGCGGCGCTCTGAGTAGACACATCAAAATGCACACCGGAGAAAAGCCATTTACATGCAACATTTGCAGCAAGTCATTCATTGGGAGTGGAGAGTTGAAAAAGCATTTGAAAGTACACAGTGAAGAAAAACCATTTACTTGCTACACTTGTACGAAATCTTTCAGAGATAAGAAGTCTTTGAAAATTCATATCAGATTGCACACTGGAGAAAAGCCATACACATGCAGCGTCTGTGGTAAGTCTTTTACGCAAAGCAGCAGTTTGAGTATGCATTTCAAGAGAGTTCACAGTGAAGACAAACCCTACAGCTGCACTGTGTGTGGGAAATCGTTTTCAGTCAATTATATTTTGACAAAacacatgagaattcacactAAAGAGGAGCCACAATAG
Protein Sequence: MYYIENKYPQEVYQRFTGSLVVPGDNRPLTVCYMCDAQIARCWRFYNMCQKSEKICTDLYQNNVEVTHESLAQHSLGWIYNLSTTPVKLVTFVEETEITVKEEDTSDDEMLTPMFVEEIKSECHWLNSNEIIDDNTISTSIHDSSNGNCNEKDINKKRDKSKSKMKRESRRGNVAKLFKCDVCKKYFTKSSYLERHMRRHTEEKPYSCKICTEKFSHMDSLKTHTLGHTAEMPTCDVCGKSFTTKTVLNRHIMQVHSGQKPMECKVCNKSFPVRDSLRAHMKIHVGYKPFVCNVCGKTFFDKSQLKVHTRIHSGEKPFTCDLCNKSFTQLTILKSHMHLHTGEKPYVCKICNKSFRHRSTLAYHSQLHTGGKPYTCPICNSVFDLKPLLRKHMATHTDNTSHVCKVCNKAFIQSVCLRKHMKIHTEERQYTCNVCGKSFFRSTGLNNHMKTHTGEKPYTCNVCGKSFSLNSTLVKHKRIHTGERPYSCDVCNKKFRLSGALSRHIKMHTGEKPFTCNICSKSFIGSGELKKHLKVHSEEKPFTCYTCTKSFRDKKSLKIHIRLHTGEKPYTCSVCGKSFTQSSSLSMHFKRVHSEDKPYSCTVCGKSFSVNYILTKHMRIHTKEEPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705647;
90% Identity: iTF_00696641;
80% Identity: iTF_00697569;