Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001323.1:128795-130387[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.006 0.47 11.8 3.8 1 23 68 90 68 90 0.97

2 16 1.5e-05 0.0012 19.9 2.1 1 23 97 120 97 120 0.98

3 16 3.1e-05 0.0024 19.0 1.1 1 23 127 149 127 149 0.98

4 16 1.4e-05 0.0011 20.1 0.6 1 23 159 181 159 181 0.98

5 16 7.1e-05 0.0056 17.8 2.7 2 23 187 208 186 208 0.97

6 16 6.2e-05 0.0049 18.0 0.3 2 23 213 236 212 236 0.92

7 16 0.00013 0.01 17.0 1.4 1 23 242 264 242 264 0.97

8 16 6.7e-07 5.3e-05 24.2 2.4 1 23 270 292 270 292 0.98

9 16 6.7e-05 0.0053 17.9 2.6 1 23 297 319 297 319 0.98

10 16 0.0002 0.016 16.4 0.2 1 23 325 347 325 347 0.97

11 16 2.3e-06 0.00018 22.5 1.6 1 23 352 374 352 374 0.98

12 16 1.7e-05 0.0014 19.8 0.6 1 23 380 404 380 404 0.95

13 16 3.1e-06 0.00024 22.1 1.2 1 23 410 432 410 432 0.97

14 16 2.1e-08 1.6e-06 29.0 0.5 1 23 438 460 438 460 0.98

15 16 0.00079 0.062 14.6 0.2 3 23 468 488 466 488 0.96

16 16 0.00014 0.011 16.9 5.8 1 23 494 516 494 516 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.006	0.47	11.8	3.8	1	23	68	90	68	90	0.97
2	16	1.5e-05	0.0012	19.9	2.1	1	23	97	120	97	120	0.98
3	16	3.1e-05	0.0024	19.0	1.1	1	23	127	149	127	149	0.98
4	16	1.4e-05	0.0011	20.1	0.6	1	23	159	181	159	181	0.98
5	16	7.1e-05	0.0056	17.8	2.7	2	23	187	208	186	208	0.97
6	16	6.2e-05	0.0049	18.0	0.3	2	23	213	236	212	236	0.92
7	16	0.00013	0.01	17.0	1.4	1	23	242	264	242	264	0.97
8	16	6.7e-07	5.3e-05	24.2	2.4	1	23	270	292	270	292	0.98
9	16	6.7e-05	0.0053	17.9	2.6	1	23	297	319	297	319	0.98
10	16	0.0002	0.016	16.4	0.2	1	23	325	347	325	347	0.97
11	16	2.3e-06	0.00018	22.5	1.6	1	23	352	374	352	374	0.98
12	16	1.7e-05	0.0014	19.8	0.6	1	23	380	404	380	404	0.95
13	16	3.1e-06	0.00024	22.1	1.2	1	23	410	432	410	432	0.97
14	16	2.1e-08	1.6e-06	29.0	0.5	1	23	438	460	438	460	0.98
15	16	0.00079	0.062	14.6	0.2	3	23	468	488	466	488	0.96
16	16	0.00014	0.011	16.9	5.8	1	23	494	516	494	516	0.98

Sequence Information

Coding Sequence: ATGGCTACGATATACATTGTGGAATCAAGTGATAGTCTTGAGAAAGATGTAAAGCAAGAACCACTTACCTTTAAAGAAGAAGAAATACATGAAGAGTCTGTTTATGAAGATGcttttgatgataatgatgataaaccTCTTAAGAAACCTCTTAAACTAGAAGATAAATCAAGTAAAGATGAAAATGGTGCTGTAGAACCATTCTATTGCTATAAATGCAATTTGTCTTTCAATCTCAAATATCAATATGAAAAACACTCAAAGATACACATGGAAGATGAAAAAATATACACTTGCGATTTATGCCCTAAAAAGTTTAAACTTAAACGAAGTTTAGTTAAACACATGCTAAAATACCATAGAGAAAACACCAAACTATACCCTTGCACTAAATGTACAGAGAAATTTTATCGCAAAATCGCCTTGAAAAAGCACTTACTTATTCATAATGATAAAAGTGAACCCAACGAAGAGTTCACATGTGATATTTGCAACAGAGTCGTTAATAATCTATACAATCTCCAAAAACATAAGGCAACGCACACAGACGACTCTTTGACTTGTCAAACATGCGGGAAGAACTATCTTAACAAAAATACGCTGAAAAAACATATGCGAACGCATAACTTACAGCACGCGTGCGACCAACCCGGTTGTGGAAAGATATTTGCGCAGAAAAATCAACTAACAATACACTCTAGGGTTCATAGTGGAGAAAGACCATTTGCTTGCAATAAATGTAATAGATCTTATACGCTTTTGGACTCTTTGAAATACCACCAAAGAGGTCATGAAGGAAACAGACCGTATAAGTGCAACCTTTGCGAGAAAGCCTTTTACAGAAAGTTCAATTTGACCAATCATATGAAAGCACACGAAAGAGAGTCTTACAACTGCTTGCATTGCAGTAAAACCTTTAACCTTCCCGTGCATTTAGAAACTCATATGCTAGTCCATACAACATTAAAACCTCATTCGTGTGGACTCTGCGATTCAACCTTTGCTGCACCAAGCAGTCTGAAAGCCCATATGGTCACCCATACCGACTATATGTTCACATGCGATCGATGCGCGAAAAGCTTCCGCGACAAAAGTAGCTTACAAAGTCATATAAAACTGCACGATGGGATCAAACCCCACATATGTCCGGAACCAAATTGCGGGAAGGCTTTCGTCCGGAAATTTCAACTAAAAGAACATTCTAGGGTTCATTCTGGAGAACGACCGTATATTTGTAACGAGTGTGGTAAGACCTTTACACAGAGTAGCTCGTTGCTTTTCCACCAAAGACTCCACAGTGGAGAAAGACCATATGTGTGTGAAATATGCGGAAGATCTTTCACAGATAAATATGGCTTGCAGAAGCATACACGTGTTCACACAAATGAAAAGCCATATGGTTGTGATAGCTGTGACTTAAGATTCGCGTATCCTAGTGCGTTGCAAAAACATAGTTCCACTCATAGTGGAGAGAAACCGTTCTCGTGTGAGAGGTGTTATAAGATTTTTGGCCGTAAGTGTAGTTTGAGGAAACATATGAAGACTCATTTGAGGGAAAAGTTTCAGGGACCTTTGCTATTGCCTGCAAAATGA
Protein Sequence: MATIYIVESSDSLEKDVKQEPLTFKEEEIHEESVYEDAFDDNDDKPLKKPLKLEDKSSKDENGAVEPFYCYKCNLSFNLKYQYEKHSKIHMEDEKIYTCDLCPKKFKLKRSLVKHMLKYHRENTKLYPCTKCTEKFYRKIALKKHLLIHNDKSEPNEEFTCDICNRVVNNLYNLQKHKATHTDDSLTCQTCGKNYLNKNTLKKHMRTHNLQHACDQPGCGKIFAQKNQLTIHSRVHSGERPFACNKCNRSYTLLDSLKYHQRGHEGNRPYKCNLCEKAFYRKFNLTNHMKAHERESYNCLHCSKTFNLPVHLETHMLVHTTLKPHSCGLCDSTFAAPSSLKAHMVTHTDYMFTCDRCAKSFRDKSSLQSHIKLHDGIKPHICPEPNCGKAFVRKFQLKEHSRVHSGERPYICNECGKTFTQSSSLLFHQRLHSGERPYVCEICGRSFTDKYGLQKHTRVHTNEKPYGCDSCDLRFAYPSALQKHSSTHSGEKPFSCERCYKIFGRKCSLRKHMKTHLREKFQGPLLLPAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00700314;
90% Identity: iTF_00702201;
80% Identity: -