Basic Information

Insect: Eupithecia centaureata
Gene Symbol: -
Assembly: GCA_944548335.1
Location: CALYMU010001323.1:123188-125206[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0014 0.11 13.8 1.7 3 23 89 109 88 109 0.98

2 20 0.00024 0.019 16.2 3.8 1 23 114 136 114 136 0.97

3 20 1.5e-06 0.00012 23.1 0.4 1 23 156 178 156 178 0.98

4 20 0.00014 0.011 16.9 2.2 1 23 190 212 190 212 0.98

5 20 0.00041 0.032 15.5 2.2 1 23 217 239 217 239 0.99

6 20 3.2e-05 0.0025 18.9 0.6 2 23 244 267 243 267 0.92

7 20 4e-06 0.00032 21.8 0.6 1 23 273 295 273 295 0.97

8 20 0.00051 0.04 15.2 2.7 1 23 301 323 301 323 0.92

9 20 4e-06 0.00031 21.8 1.9 1 23 329 351 329 351 0.98

10 20 0.00012 0.0091 17.2 1.5 1 23 357 381 357 381 0.93

11 20 2.5e-06 0.0002 22.4 0.9 1 23 387 409 387 409 0.98

12 20 3.6e-05 0.0028 18.8 7.2 1 23 415 437 415 437 0.98

13 20 0.00011 0.0084 17.3 2.1 1 23 443 465 443 465 0.97

14 20 0.0068 0.54 11.6 1.5 1 23 471 493 471 493 0.96

15 20 4.3e-05 0.0034 18.5 0.5 1 23 497 519 497 519 0.98

16 20 5.4e-05 0.0042 18.2 1.7 3 23 527 549 525 549 0.92

17 20 2.7e-05 0.0021 19.2 1.1 1 23 555 577 555 577 0.97

18 20 1.6e-08 1.3e-06 29.3 1.0 1 23 583 605 583 605 0.99

19 20 0.00086 0.068 14.4 0.1 1 23 611 633 611 633 0.96

20 20 1.2e-06 9.2e-05 23.5 6.8 1 23 640 662 640 662 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0014	0.11	13.8	1.7	3	23	89	109	88	109	0.98
2	20	0.00024	0.019	16.2	3.8	1	23	114	136	114	136	0.97
3	20	1.5e-06	0.00012	23.1	0.4	1	23	156	178	156	178	0.98
4	20	0.00014	0.011	16.9	2.2	1	23	190	212	190	212	0.98
5	20	0.00041	0.032	15.5	2.2	1	23	217	239	217	239	0.99
6	20	3.2e-05	0.0025	18.9	0.6	2	23	244	267	243	267	0.92
7	20	4e-06	0.00032	21.8	0.6	1	23	273	295	273	295	0.97
8	20	0.00051	0.04	15.2	2.7	1	23	301	323	301	323	0.92
9	20	4e-06	0.00031	21.8	1.9	1	23	329	351	329	351	0.98
10	20	0.00012	0.0091	17.2	1.5	1	23	357	381	357	381	0.93
11	20	2.5e-06	0.0002	22.4	0.9	1	23	387	409	387	409	0.98
12	20	3.6e-05	0.0028	18.8	7.2	1	23	415	437	415	437	0.98
13	20	0.00011	0.0084	17.3	2.1	1	23	443	465	443	465	0.97
14	20	0.0068	0.54	11.6	1.5	1	23	471	493	471	493	0.96
15	20	4.3e-05	0.0034	18.5	0.5	1	23	497	519	497	519	0.98
16	20	5.4e-05	0.0042	18.2	1.7	3	23	527	549	525	549	0.92
17	20	2.7e-05	0.0021	19.2	1.1	1	23	555	577	555	577	0.97
18	20	1.6e-08	1.3e-06	29.3	1.0	1	23	583	605	583	605	0.99
19	20	0.00086	0.068	14.4	0.1	1	23	611	633	611	633	0.96
20	20	1.2e-06	9.2e-05	23.5	6.8	1	23	640	662	640	662	0.98

Sequence Information

Coding Sequence: ATGATGAATATTCCACTAGTTCCAACCTTATCCATCAGCAATGATAAATCCATGATCACTGTATCAATAGTGGAAACTGACAGTGAATTAATAGTAAAAGAGGAACCAATGTCTTTAAAACAGGAAGAAATAccaaatgatttatttgaaatagCTTTTCCAGATGATATTGAGTCAGACGAACCATTAAAAGTTTCCAAGAGCTTTAAACTAGAAAATGCTTCTATAAGCAAGGAAAAGCTAAGCGATATCCAAGATAACTTTTGCAATAAGTGCAATATACCATTTTTAAGCAAATATTACTTCAACAAACATATGAGAATACATATTGATGGAAAGTATTTCTGTGATAAGTGCCCTAAAAAGTTTAAATTCAAGAAAAGGTTAGTGAAACACATGCTAAATCATAGTGATGAAAAAGATGTCAGGCAggtacaaaaacaaacaaaagatacATCCTCGGGCTACACATGTGAAATTTGTAACAAAACAGTCAGCAATCTGTACAATCTTCAGTTACACATGTCTGTACACACTAAGAGAAAACCTGAACCAACGACAACTGAATTTACTTGTGAAATCTGCAATAGAAGCTTGAACAATCTACACAACTTACTAAAGCATAAGGCAACTCACACAGAAGAGAAATACACGTGTGAAACTTGTTCTAAAAGctacttgaatagagattcttGGAGGAAACATTTGAGAACTCATTCGGCACAGCATGCTTGCGACCATCCTGGTTGTGATAAAGTTTTTCCGCAGAGAAATCAGTTAATAGTCCACTTAAGGGTACATACTGGTGAGAGACCATTTGCTTGTGGAGAATGCGGGAAATCCTACACCAAAATGGAGTCTCTTAAAGTCCATCAGAAAACGCACTCTAATGAAAAACCCCACAAGTGTATTTCTTGCAATAAATCGTTTAATTCTAAAGTTAATCTACTGAATCATATACAATCACATACTGACACTAATAGTTATGAGTGCGAACATTGCAATAAAGCCTTTTCTCTTGCAATACATCTAGAAAAACATATGGTGACACATACATCTGTTAGAAGGCATATTTGCGAAGAACCGGGCTGCGGAAAAGAATTTGCAAGACGCTTCCATTTAAAAGAACATAGTAGAATTCATACTGGAGAAAGACCATTCTCATGCTCAGAGTGTGATAAGACCTTTATGAAGTCAGAGTCCTTAAGAGCTCATCTCAAAATACACAGCGGTGAGAAACCCCATAAGTGTGCATCATGCTCCAAAGCATTTCATCGAAAGAGGAATCTGCAAAAACACATGAGAACGCATGAAGAAAAGGAATCATTCGACTGTGAGCATTGTGCTAAAACTTATACCCTACCTGTCCATTTAGAAACGCATATGCTGACCCATACAAACTTAAAACCACATGCTTGCACCCAATGTGTCCTAACCTTTGCTGCTCTGAGCAGTTTGCATGCACACTTAAAAACGCACGAGTACAAATACACATGTGACAGATGCGCAAAGAGTTTCGGCGATAAAGGAACTCTCCAGAGTCATATAAAACTCCATGATGGTGTAAAACCTCATTTGTGCGAGTACCCTGGTTGTGGCAAGGCTTTTGCTAGACGCTACCATTTGAAGGAACATTCTCGTGTTCACACAAAAGAAAAACCTTTCATATGCAACGAATGTGGGAAGACATACACACAAAGCAGTGCCCTATTCTTCCATCAGAGACTGCATAGCGGAGAACGGCCGTATGTCTGTGAAATATGTGGTCGAACCTTCACAGATAAGTATGGTTTGCAAAAGCATACGCGAACGCATACTGGTGAGAAACCTTATGCATGTGACAGCTGTGATCTTAGATTCGCATATGCAAGTGCTCTGAGGGATCATAGGGCCATACATGTGAATGGAGAGAAGCCATACGCCTGTGATAGGTGTTTTAAGACTTTTTGTCGTAAGAGTAACTTGAAGAAGCATATGAAAACGCATATAAGAGATAAACAGTTTTTTAAAAGTCCGTGA
Protein Sequence: MMNIPLVPTLSISNDKSMITVSIVETDSELIVKEEPMSLKQEEIPNDLFEIAFPDDIESDEPLKVSKSFKLENASISKEKLSDIQDNFCNKCNIPFLSKYYFNKHMRIHIDGKYFCDKCPKKFKFKKRLVKHMLNHSDEKDVRQVQKQTKDTSSGYTCEICNKTVSNLYNLQLHMSVHTKRKPEPTTTEFTCEICNRSLNNLHNLLKHKATHTEEKYTCETCSKSYLNRDSWRKHLRTHSAQHACDHPGCDKVFPQRNQLIVHLRVHTGERPFACGECGKSYTKMESLKVHQKTHSNEKPHKCISCNKSFNSKVNLLNHIQSHTDTNSYECEHCNKAFSLAIHLEKHMVTHTSVRRHICEEPGCGKEFARRFHLKEHSRIHTGERPFSCSECDKTFMKSESLRAHLKIHSGEKPHKCASCSKAFHRKRNLQKHMRTHEEKESFDCEHCAKTYTLPVHLETHMLTHTNLKPHACTQCVLTFAALSSLHAHLKTHEYKYTCDRCAKSFGDKGTLQSHIKLHDGVKPHLCEYPGCGKAFARRYHLKEHSRVHTKEKPFICNECGKTYTQSSALFFHQRLHSGERPYVCEICGRTFTDKYGLQKHTRTHTGEKPYACDSCDLRFAYASALRDHRAIHVNGEKPYACDRCFKTFCRKSNLKKHMKTHIRDKQFFKSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00706248;
90% Identity: -
80% Identity: -