Ecen012512.1
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- -
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000829.1:1320257-1324523[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.4e-12 4.5e-09 36.7 0.0 4 39 150 186 148 190 0.91 2 4 1.9e-11 1.6e-08 34.9 0.3 4 39 204 239 201 243 0.92 3 4 1.8e-16 1.5e-13 51.0 0.1 2 45 257 301 256 301 0.96 4 4 3.8e-17 3.1e-14 53.2 0.0 1 43 308 351 308 352 0.96
Sequence Information
- Coding Sequence
- ATGCCTAACTCTGGAATTGTTGCTGTAAAATGTGAACATCTCTCTGACGAGGAAGATAACAGTCGTCGGCTAACGGATCTCTTTCTAAATAACACGAGTCATGAGGTGCTGGAGGAGCTGGCTCCGCTGGCGCCGGCCGGGCCCGCGGCGACGCCCGTCTGCGTGAAGCAGGAGCCGGCGGAGCGCCCCGAAGAGAGCCTCGAGACCTTGGAGACCGCGGCGCACTCCGCGGGATCTTTGTTGCAGAGACACATGGCGATTATGAGGTCATCTGAAGTTCTCAGCTTGGAGAACTTCACAACGCTGCAAGCTGTCAAGGATGAACCTACTTCAGAAGGAGAATGCCAAGCCACCGAGCAGCCTACGAGCGGCGACGAGCAGAGCGACTCGAGCGGCCGCTTGGAGGCCGAGGGCGCCCGCGGCAGCCCCAAGACTTGGCGGCAGCGCGACATGGACCGCGCGCTTGACGCTCTGCGAAACCATCACATGAGTCTTACCAAAGCGTCATCAACGTATGGTATCCCATCAACGACGCTGTGGCAGCGCGCTCACCGGCTCGGAATTGACACGCCGAAAAAGGAAGGCTGCGCCAAGTCGTGGAGCGAAGTGGACCTGCGTGCTGCCCTAAACGCGCTTCGGGCTGGTGCCATCTCCGCCAACAAGGCCAGCAAGGCTTATGGTATACCAAGCAGCACACTGTACAAGATAGCTCGCCGCGAGGGCATCCAGCTGGCTGCGCCGTTCAACGCGGCGCCGGTGGCGTGGCGGCGCGGGGACCTGCAGCGCGCGCTCCAGGCCATCCGCTCGGGGCGCGCCTCCGTGCAGCGCGCCGCCACGCAGTACGGGATACCTACTGGTACCCTTTATGGGCGTTGCAAACGAGAAGGCATAGAACTGTCTCGATCGAACCCCACACCTTGGTCTGAAGACGCTATGGGAGAGGCGTTAGAAGCTGTCAGgATTGGTCAGATGTCGATTAACCAGGCAGCTATCCACTTCAATTTGCCATATTCTTCACTCTACGGGAGATTCAAAAGATGCAAGTATCAAGTTCCGCCGTTATCACATCAAGACGTCCAAAATCCTCGGGAAATAGTAAATCCTGAAGATCTGAACTACTATCATCAGATGCAAGGATACCCGGAGCAGGATCCGGCACAGCAACCTTACCCTCACGAGTTCATCCCAGACGCGTCACCATCTCTTAACAACATAGTGCTACAAGATGCTTTTTCAGGGCAGACGGTGTATTACAACCAGAATTTTAGCAGCATAGTCACCAGTTGA
- Protein Sequence
- MPNSGIVAVKCEHLSDEEDNSRRLTDLFLNNTSHEVLEELAPLAPAGPAATPVCVKQEPAERPEESLETLETAAHSAGSLLQRHMAIMRSSEVLSLENFTTLQAVKDEPTSEGECQATEQPTSGDEQSDSSGRLEAEGARGSPKTWRQRDMDRALDALRNHHMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGCAKSWSEVDLRAALNALRAGAISANKASKAYGIPSSTLYKIARREGIQLAAPFNAAPVAWRRGDLQRALQAIRSGRASVQRAATQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQVPPLSHQDVQNPREIVNPEDLNYYHQMQGYPEQDPAQQPYPHEFIPDASPSLNNIVLQDAFSGQTVYYNQNFSSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00698192;
- 90% Identity
- -
- 80% Identity
- -