Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: Zbtb41
Assembly: GCA_943735975.1
Location: CALSER010000021.1:1870292-1873277[+]

Transcription Factor Domain

TF Family: zf-GAGA
Domain: zf-GAGA domain
PFAM: PF09237
TF Group: Zinc-Coordinating Group
Description: Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.075 5.3e+02 1.1 0.1 26 48 180 202 157 206 0.75

2 14 0.019 1.3e+02 3.0 0.2 21 44 203 226 195 232 0.86

3 14 0.62 4.4e+03 -1.9 0.0 26 45 235 254 227 262 0.77

4 14 0.19 1.4e+03 -0.2 0.1 22 52 260 290 251 292 0.78

5 14 0.00038 2.7 8.4 0.0 16 53 309 347 304 348 0.85

6 14 0.015 1e+02 3.3 0.1 21 52 343 374 341 375 0.86

7 14 0.00013 0.89 10.0 0.1 23 44 373 394 365 400 0.89

8 14 0.011 74 3.8 0.3 26 46 404 424 398 427 0.89

9 14 0.25 1.8e+03 -0.6 0.0 22 46 428 452 425 460 0.79

10 14 0.099 7e+02 0.7 0.1 21 31 455 465 444 482 0.82

11 14 0.0015 10 6.6 0.0 21 46 483 508 475 511 0.89

12 14 0.00025 1.8 9.0 0.0 21 49 511 539 508 542 0.87

13 14 0.0012 8.4 6.8 0.0 21 52 539 570 535 570 0.87

14 14 0.0012 8.1 6.9 0.0 21 48 567 594 565 601 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.075	5.3e+02	1.1	0.1	26	48	180	202	157	206	0.75
2	14	0.019	1.3e+02	3.0	0.2	21	44	203	226	195	232	0.86
3	14	0.62	4.4e+03	-1.9	0.0	26	45	235	254	227	262	0.77
4	14	0.19	1.4e+03	-0.2	0.1	22	52	260	290	251	292	0.78
5	14	0.00038	2.7	8.4	0.0	16	53	309	347	304	348	0.85
6	14	0.015	1e+02	3.3	0.1	21	52	343	374	341	375	0.86
7	14	0.00013	0.89	10.0	0.1	23	44	373	394	365	400	0.89
8	14	0.011	74	3.8	0.3	26	46	404	424	398	427	0.89
9	14	0.25	1.8e+03	-0.6	0.0	22	46	428	452	425	460	0.79
10	14	0.099	7e+02	0.7	0.1	21	31	455	465	444	482	0.82
11	14	0.0015	10	6.6	0.0	21	46	483	508	475	511	0.89
12	14	0.00025	1.8	9.0	0.0	21	49	511	539	508	542	0.87
13	14	0.0012	8.4	6.8	0.0	21	52	539	570	535	570	0.87
14	14	0.0012	8.1	6.9	0.0	21	48	567	594	565	601	0.88

Sequence Information

Coding Sequence: ATGTACTACATCGAAAACGAATATCCCCAAGATGTTTACCAAAGGTTTACTGGAAGTTTGCTCATCTCAGGAGACAACAGACCCAGCACAGTGTGCTACATGTGCAATGCTCAGTTAGTAAGATGCTGGAGGTTCTACAACATGTGCCAAAAGTCCGAGAAAATCTGCACAGACCTGTATCAGAACAATCTAGAGGTAACACAGCAGAGTCTAGTCAAGCACAACCTGGGGTGGATATACAACTTGTCCACAACACCAGTGAAATTAGCAACTTATGTTGAAGATACTGAAATCACTGTTAAAGAAGAAGAAACCTCAGACGATGAAGTGCTGATGCCCATGTTTGTTGAAGAAATCAAAAGTGAATGCAATTTGCTTCATACTAATGAAACTATTGATGATAAATCTATAACTACAAACATGCATGATAGCTCAAATAGACATTGTTATGAAAAGGACATTAATAGTAGAAAAAGAGACAAGCCTAAAACTAAAATGAAACGAGAAACCCGTAGAGGCAATGTAGCTACACTGTTTAagtgtgatgtttgtaaaaagccatttacaaaaagtttgtacctgaaaagacacatgagaatacacactgaggaaaagccatattcttgcaaaatatgcactgagacatttaggtgtatggattcattaaaaactcatatgcttggacataccacagagatgcccacctgtgatgtctgtggcaagagttttgccacaaaaactgttctcaatagacacattatgcaagtacactctggacaaaaaccaatggaatgtaaagtttgcaataaatcatttccagtcagagacagtctaagggcgcatatgaaaattcatgttggatacaagccatttgtctgcaatgtctgtgggaaaacgttttttgacaagagtcagttgaaagttcactccagaatacattctggagaaaagccatttacatgtgacttgtgcaacaagtcatttactcaattaactatattaaaaagtcatatgcatcttcacacgggagagaagccttatgtttgtaaaatatgtaacaagtcatttcgacatcgttctactttggcctaccactcacaactccataccggcggaaagccatatacatgccctatatgcaacagtgtcttcgatctcaagccccttttacgcaagcacatggcaactcacacagacaacacctcccatgtttgcaatgtgtgtaataaggcctttatccaaagtgtttgtctaaggaagcacatgaaaattcatacagaggagagacaatacacttgtaatgtgtgtggcaaatccttcttcaggagtactggattaaacaatcacatgaaaacacacactggagaaaaaccatatacatgtaatgtgtgtggaaaatcattctctcttaattcaactttggtgaaacacaaaagaatacacacgggtgagagaccatactcctgtgatgtgtgcagtaagaagttcaggctcagcggcgctttgagtagacatatcaaaatgcacacgggagaaaagccatttacctgcaacatttgcagtaagtcattcatagggagtggagaattgaaaaaacatttaaaagtacacagtgaagaaaagccatatacttgctacacttgtacgaaatcattcagagataaaaagtctttaaaaattcatattagactgcacactggtgaaaaaccatacacatgcagtgtctgtggtaaatcatttacccaaagtagtagcttgagcatgcacgtcaagagagtgcacagtgaagacaaaccatacagctgcactgtttgtgggaagtcgttttcagtcaattatattttgaccaaacacatgagaattcacactaaagaggagccACAATAG
Protein Sequence: MYYIENEYPQDVYQRFTGSLLISGDNRPSTVCYMCNAQLVRCWRFYNMCQKSEKICTDLYQNNLEVTQQSLVKHNLGWIYNLSTTPVKLATYVEDTEITVKEEETSDDEVLMPMFVEEIKSECNLLHTNETIDDKSITTNMHDSSNRHCYEKDINSRKRDKPKTKMKRETRRGNVATLFKCDVCKKPFTKSLYLKRHMRIHTEEKPYSCKICTETFRCMDSLKTHMLGHTTEMPTCDVCGKSFATKTVLNRHIMQVHSGQKPMECKVCNKSFPVRDSLRAHMKIHVGYKPFVCNVCGKTFFDKSQLKVHSRIHSGEKPFTCDLCNKSFTQLTILKSHMHLHTGEKPYVCKICNKSFRHRSTLAYHSQLHTGGKPYTCPICNSVFDLKPLLRKHMATHTDNTSHVCNVCNKAFIQSVCLRKHMKIHTEERQYTCNVCGKSFFRSTGLNNHMKTHTGEKPYTCNVCGKSFSLNSTLVKHKRIHTGERPYSCDVCSKKFRLSGALSRHIKMHTGEKPFTCNICSKSFIGSGELKKHLKVHSEEKPYTCYTCTKSFRDKKSLKIHIRLHTGEKPYTCSVCGKSFTQSSSLSMHVKRVHSEDKPYSCTVCGKSFSVNYILTKHMRIHTKEEPQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00705647;
90% Identity: iTF_00696641;
80% Identity: iTF_00696641;