Basic Information

Insect: Eupithecia abbreviata
Gene Symbol: -
Assembly: GCA_943735975.1
Location: CALSER010000086.1:524633-545869[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.4 2.6e+02 2.6 0.5 1 23 232 254 232 254 0.69

2 12 0.65 38 5.2 1.0 1 20 308 327 308 329 0.93

3 12 0.27 16 6.4 0.4 2 23 345 367 345 367 0.94

4 12 3.7 2.2e+02 2.9 4.4 1 21 799 818 799 819 0.93

5 12 0.042 2.5 9.0 0.6 1 23 831 853 831 853 0.94

6 12 0.16 9.2 7.2 5.1 3 23 860 880 858 880 0.95

7 12 0.00087 0.052 14.3 0.3 3 23 987 1007 986 1007 0.90

8 12 0.052 3.1 8.7 1.5 1 23 1022 1044 1022 1044 0.97

9 12 1.5e-06 8.6e-05 23.0 2.6 1 23 1050 1072 1050 1072 0.98

10 12 0.00022 0.013 16.2 0.6 2 23 1078 1099 1077 1099 0.93

11 12 0.15 9.1 7.2 5.0 2 23 1106 1128 1105 1128 0.90

12 12 0.00017 0.01 16.5 0.6 3 23 1165 1186 1164 1186 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.4	2.6e+02	2.6	0.5	1	23	232	254	232	254	0.69
2	12	0.65	38	5.2	1.0	1	20	308	327	308	329	0.93
3	12	0.27	16	6.4	0.4	2	23	345	367	345	367	0.94
4	12	3.7	2.2e+02	2.9	4.4	1	21	799	818	799	819	0.93
5	12	0.042	2.5	9.0	0.6	1	23	831	853	831	853	0.94
6	12	0.16	9.2	7.2	5.1	3	23	860	880	858	880	0.95
7	12	0.00087	0.052	14.3	0.3	3	23	987	1007	986	1007	0.90
8	12	0.052	3.1	8.7	1.5	1	23	1022	1044	1022	1044	0.97
9	12	1.5e-06	8.6e-05	23.0	2.6	1	23	1050	1072	1050	1072	0.98
10	12	0.00022	0.013	16.2	0.6	2	23	1078	1099	1077	1099	0.93
11	12	0.15	9.1	7.2	5.0	2	23	1106	1128	1105	1128	0.90
12	12	0.00017	0.01	16.5	0.6	3	23	1165	1186	1164	1186	0.97

Sequence Information

Coding Sequence: ATGTCAGAAAGCAGGAAGAGAAGCAGAAAATCTAAAATAGAAGTTCGCGAAGACGACTGTGAATTAGAGGTTGTGTGTGCCGACGTAAACATCGACGTGCAGCATTTGCAGTTGGCGGAGCCTCAAAGAATAGCCCCAGGGCCTCGTAGAATAGCCCCAAAAAGACCAAAAAAAGTGGAATATTATCCAGAAGTCCCAGTTATTCCTGATCATGATTACTGCTGGCCGTTTACAGCCTCAAAGCCAATTACATACTCAAAGTTTGATAAACCTGATCATATCAAACTACCCAAGTGCACAGGAACCACCATTGATGGCTTAACAAAAACACCTCAACCCTCTTTAAATCAGGCCAAGATAAAAGTCGATTGGTACAATTTACCCAAGTTTCATTTTAAGGGTGGTGTTTTGGAAAAAATGGAAAACATACAGAAATATAAAGGGAAAGACAATGGCAAGATGCGGATGTGCAAATATGTCCCAGAATTACTTTTCAAAGAGTCGAAGAAAATTGCTGAGACATCTGACAATTTCGCAGATAAAATACTCGATGTTGAGATGAGGAATCAATGGGGCAATGTATTGTATACTCCCAATAAGGTTCCTGCTCAGGATTTGAAGCTACAGGCGGCCATATGTACTTGGCAGGCTTGGTATAACGGATCTCGATTGGTGCGAGAAGCACCACTGTTCTATCAGTGTCATATCTGTGAGCAAGCTTGGTGGAGACTCCAACCGTTCCGAGATCACATCCGACAACATGATGGCTCAAAGCTCATCATCTCCATGAAAGAGCATCTACACGAATCGTTCATAATAGCGAGCTATGAGATAGTTAACAAACTTATATACATACCTATTGATGGAAACTGCTATCGCTGTGGTGAAGACGTTGAGTTCCATAAAGCGAATTGCCTCGCATACTCTTGCAGTAGATGCTCGAGGAGTGTCTACACGTGCACTGGCTTAAGAGACCATGAATCTGTTTGCTTATATGTCAATTTGGTCATGTACAACATTTCAATAGACCGTCAATGCACATTATGCAAGCATGTTTTGAACTCGGTAAGCTTAGTAGAAAAGCATATGATCGAAGCTCATTCTGTACGTTCAGATATACCCGTGCATAACTCTTTCAAAAACTGTGTTAGCTGCGGTGAGAAATATTTTACATTTACAATGCACAATTGTTGTAAAAGTGGACGGAACTGCAGTTGCGAGCATTGTTGCAGAAAGTTTGCTTCGACTAAGCTTATGCTTAATCATTCGTTGAGTTGCCACAATAGACCAGTATGTTGTAGAATCTGCGATATGCAGTTGAAAGCGAAATGCCAAGAGATGGAGCATCTTGTTGAGAATCATACGAGTAGTTACCGGTTGGTGTTCAAGTGCACGGGTTGCTGGACGAGTAATGTGTTGTTTATGGATGAAAAGTCGTTCAATATACATCGACAGTTAGAGCATCAGAGGAAGGTAGATAGGAGGAGGCTATTTTTTGAAAAGATGCTGGTACCAAAAAGCTGCCTGGATGACGATTACGAGGAAGAAGCCACTATAATTGTCGTCGACCCTAGTCTACCCTCAAAATCGTTCTCAGACTTGGCAGCGGACGTCAAAGTGACAGTCGACGAAATCGACGTCAAGAAAGAGCCTATAGACATTGACGAAAACGAAGAAGTTGATTACGAGGAAATGCTCTTAAAAATGTTCAATCAATCGCCTCAAACGCCTGTATCTAATTCTAAAGTTATTAACACCGATAACAATACAGCAGGAGCTAACAAAAGAATAGAAGAGTACAAAACAGAAGAAGATAGAGAAGCTTTCAAATTGGATCATGTATACAAAACTGAAGATACAACAGAATTTGATTACGGCAGTGTTAAAGTTAAAGCTGAACCAATAGATGATATTGATATTATAGAGAATCCAGTTGAGGAGGTTCAAATCAAAACGGAACCGGTCGATCCTTCTGAAATTGATGATGAAATGATGAATGTTTGCTATGATTACGGTGAAGCGACTGTTAAAATTGAGAGGAATTATGAACCAGATGATTTCAGCATCAATGAACCAACAAGCAGCAAAGATGTAACAAGCGGCAAACTTGAAACAAGTTTCAAAGATGTAACGAGCGGCAAAGTTGAAACAAGTAGCAAAGATCCAACAAGCGATGTTGTAACAGACAATGAAGATGAACTAATCATCAAGGAAGAATTTGATGACACGACCACAGTCAAAACGGACGATACCTCCACATCGTCAGAACCTTTCCACGAATTACTGACAGAGCTAGAAATTTTCAGAGATCAGAAGAAAAAGAAGAAGAAATTCAATTATGAATACTCGATTGAAGTTATCGATGCAAAAGGGAAGTTGAAACAAAGGAAAATGTATACATGCCGAAAATGCGGGTACACAGCGCATCATAAGAAATACAAAAAGCATATGGACACCACTTGTTTAGTTTCTCCGGGTGTTGACTGTAGTTATCCGTGCTCGATATGTGGCCTTACTTTTGTTATGTTCAAGACCTATGTGTTACATTTTGAGAAGCATGGATATGATTTGATGTGTTGCTTTATATGTGGAGCTAGGTTTTCAGAGGAGTTTAAGTTTTTGAAACATATGCATAAGCATGTTAAGAGCAGTTATGTTGGTGTGCATTTGCTGGATAAAAGCGGGGAGGAGATTAAGAGGTCACAGAAGCGTGTTACATGCATGAACTGTAAAGAGACTGTAGAACAAGACACCATGTTCTCGCATTGGGAGAAACTACATCTTAAACTGAAGGAGATCAAAAGCGACGACGAGGAGCCGAGATTAGTGATCAAAGAGGAGCCAGCGCCCGAGCTGACCGTGGACTGCGAACGTGTTACCATGAACAACAAGGAGTTAGAACCAGCTATGCTTAAGCTGGCGACAGAAAATCTTCAATTGGACTCAAACGAGAAGGAGTGCATAATCTGCTATCGCGTGTTCTCGCGCCGCTACGACCTGAAGCGGCACATCGTGGAGCATCTACTGATGGATGCGCATATGAAGAAAATTAAATATAGAGATTTCCGCTGCCAGATCTGTTCGGAAGGTTTCCCCCATCCGGAGCGATATAAGTTCCACATGCGAGGGCACGGAAATATGCCCATATTCATGTGCGAACTGTGCAACAAGACTTTCAGCGACTCCAGCAACTTCGCCAAGCACAAAAAGACCCACAACGTGCGCTGCCTCGTGTGTGACATCTGCAAGAAGAAGTTCCATTCGAAGGCGGCGCTCGAGAAACACATTGGGGAACATTATTCCTTGCCGATGACGACGTGCATGTTTTGCCCGAAGACTTTCCACTCTAAGACAACCTATAAGAAACATAAATATCAAGTGCACCAGAAGCCTAGATATAGATGCATACTCTGCGACATGTTTTTCGCGACCAGTCAGATTAAATGGGACCACGATTGGGAGGTGCACCAAGTACGGAAGCACGTAGCCGACTGCCCCATCTGCAAGAAGTCATTCCGCAAGTTCTCCGACGTCAAGGTTCACGCCCGTTCTGAGCACAACACTAAAATCAGATCTATGAACTGTGGCGAGAGTACTTACAAGAAGAAGATAAAGCTATCCAAGGATCTGAAGGAGAAGGAGAAATAG
Protein Sequence: MSESRKRSRKSKIEVREDDCELEVVCADVNIDVQHLQLAEPQRIAPGPRRIAPKRPKKVEYYPEVPVIPDHDYCWPFTASKPITYSKFDKPDHIKLPKCTGTTIDGLTKTPQPSLNQAKIKVDWYNLPKFHFKGGVLEKMENIQKYKGKDNGKMRMCKYVPELLFKESKKIAETSDNFADKILDVEMRNQWGNVLYTPNKVPAQDLKLQAAICTWQAWYNGSRLVREAPLFYQCHICEQAWWRLQPFRDHIRQHDGSKLIISMKEHLHESFIIASYEIVNKLIYIPIDGNCYRCGEDVEFHKANCLAYSCSRCSRSVYTCTGLRDHESVCLYVNLVMYNISIDRQCTLCKHVLNSVSLVEKHMIEAHSVRSDIPVHNSFKNCVSCGEKYFTFTMHNCCKSGRNCSCEHCCRKFASTKLMLNHSLSCHNRPVCCRICDMQLKAKCQEMEHLVENHTSSYRLVFKCTGCWTSNVLFMDEKSFNIHRQLEHQRKVDRRRLFFEKMLVPKSCLDDDYEEEATIIVVDPSLPSKSFSDLAADVKVTVDEIDVKKEPIDIDENEEVDYEEMLLKMFNQSPQTPVSNSKVINTDNNTAGANKRIEEYKTEEDREAFKLDHVYKTEDTTEFDYGSVKVKAEPIDDIDIIENPVEEVQIKTEPVDPSEIDDEMMNVCYDYGEATVKIERNYEPDDFSINEPTSSKDVTSGKLETSFKDVTSGKVETSSKDPTSDVVTDNEDELIIKEEFDDTTTVKTDDTSTSSEPFHELLTELEIFRDQKKKKKKFNYEYSIEVIDAKGKLKQRKMYTCRKCGYTAHHKKYKKHMDTTCLVSPGVDCSYPCSICGLTFVMFKTYVLHFEKHGYDLMCCFICGARFSEEFKFLKHMHKHVKSSYVGVHLLDKSGEEIKRSQKRVTCMNCKETVEQDTMFSHWEKLHLKLKEIKSDDEEPRLVIKEEPAPELTVDCERVTMNNKELEPAMLKLATENLQLDSNEKECIICYRVFSRRYDLKRHIVEHLLMDAHMKKIKYRDFRCQICSEGFPHPERYKFHMRGHGNMPIFMCELCNKTFSDSSNFAKHKKTHNVRCLVCDICKKKFHSKAALEKHIGEHYSLPMTTCMFCPKTFHSKTTYKKHKYQVHQKPRYRCILCDMFFATSQIKWDHDWEVHQVRKHVADCPICKKSFRKFSDVKVHARSEHNTKIRSMNCGESTYKKKIKLSKDLKEKEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00698810;
90% Identity: iTF_00698810;
80% Identity: -